RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 SPATA5Q8NB90 893 aa13.8□□□□□ -0.2
GPC4-201ENST00000370828 RASGRP4Q8TDF6 673 aa13.8□□□□□ -0.2
GPC4-201ENST00000370828 FGD4Q96M96 766 aa13.8□□□□□ -0.2
GPC4-201ENST00000370828 DNM3Q9UQ16 869 aa13.8□□□□□ -0.2
GPC4-201ENST00000370828 SNX24Q9Y343 169 aa13.8□□□□□ -0.2
GPC4-201ENST00000370828 KDRP35968 1356 aa13.8□□□□□ -0.2
GPC4-201ENST00000370828 NDC80O14777 642 aa13.79□□□□□ -0.2
GPC4-201ENST00000370828 DR1Q01658 176 aa13.79□□□□□ -0.2
GPC4-201ENST00000370828 REXO1Q8N1G1 1221 aaKnown RBP13.79□□□□□ -0.2
GPC4-201ENST00000370828 ZBTB10Q96DT7 871 aa13.79□□□□□ -0.2
GPC4-201ENST00000370828 PLCH2O75038 1416 aa13.79□□□□□ -0.2
GPC4-201ENST00000370828 SMCO2A6NFE2 343 aa13.79□□□□□ -0.2
GPC4-201ENST00000370828 SASH1O94885 1247 aa13.79□□□□□ -0.2
GPC4-201ENST00000370828 CYP2J2P51589 502 aa13.79□□□□□ -0.2
GPC4-201ENST00000370828 FOXR1Q6PIV2 292 aa13.79□□□□□ -0.2
GPC4-201ENST00000370828 RAD9BQ6WBX8 426 aa13.79□□□□□ -0.2
GPC4-201ENST00000370828 EGFL6Q8IUX8 553 aa13.79□□□□□ -0.2
GPC4-201ENST00000370828 GRK7Q8WTQ7 553 aa13.79□□□□□ -0.2
GPC4-201ENST00000370828 XAB2Q9HCS7 855 aaKnown RBP13.79□□□□□ -0.2
GPC4-201ENST00000370828 STOML1Q9UBI4 398 aa13.79□□□□□ -0.2
GPC4-201ENST00000370828 CD109Q6YHK3 1445 aa13.79□□□□□ -0.2
GPC4-201ENST00000370828 CFAP73A6NFT4 308 aa13.79□□□□□ -0.2
GPC4-201ENST00000370828 MAPK13O15264 365 aa13.79□□□□□ -0.2
GPC4-201ENST00000370828 DRP2Q13474 957 aa13.79□□□□□ -0.2
GPC4-201ENST00000370828 LRRC14Q15048 493 aa13.79□□□□□ -0.2
GPC4-201ENST00000370828 PROSER3Q2NL68 480 aa13.79□□□□□ -0.2
GPC4-201ENST00000370828 WDR44Q5JSH3 913 aa13.79□□□□□ -0.2
GPC4-201ENST00000370828 DCUN1D2Q6PH85 259 aa13.79□□□□□ -0.2
GPC4-201ENST00000370828 PANK4Q9NVE7 773 aa13.79□□□□□ -0.2
GPC4-201ENST00000370828 TRIM10Q9UDY6 481 aa13.79□□□□□ -0.2
GPC4-201ENST00000370828 PHF20L1A8MW92 1017 aa13.79□□□□□ -0.2
GPC4-201ENST00000370828 SEMA3EO15041 775 aa13.79□□□□□ -0.2
GPC4-201ENST00000370828 A1BGP04217 495 aa13.79□□□□□ -0.2
GPC4-201ENST00000370828 ESRRAP11474 423 aaPredicted RBP13.79□□□□□ -0.2
GPC4-201ENST00000370828 RNASELQ05823 741 aaKnown RBP13.79□□□□□ -0.2
GPC4-201ENST00000370828 POLA2Q14181 598 aa13.79□□□□□ -0.2
GPC4-201ENST00000370828 CXorf38Q8TB03 319 aa13.79□□□□□ -0.2
GPC4-201ENST00000370828 ZSCAN10Q96SZ4 725 aaPredicted RBP13.79□□□□□ -0.2
GPC4-201ENST00000370828 THAP9Q9H5L6 903 aa13.79□□□□□ -0.2
GPC4-201ENST00000370828 COPRSQ9NQ92 184 aa13.79□□□□□ -0.2
GPC4-201ENST00000370828 ITGB1BP2Q9UKP3 347 aa13.79□□□□□ -0.2
GPC4-201ENST00000370828 SYNMO15061 1565 aa13.78□□□□□ -0.2
GPC4-201ENST00000370828 CHGBP05060 677 aa13.78□□□□□ -0.2
GPC4-201ENST00000370828 CCNE1P24864 410 aa13.78□□□□□ -0.2
GPC4-201ENST00000370828 ADCY2Q08462 1091 aa13.78□□□□□ -0.2
GPC4-201ENST00000370828 RASA3Q14644 834 aa13.78□□□□□ -0.2
GPC4-201ENST00000370828 REXO1L1PQ8IX06 675 aa13.78□□□□□ -0.2
GPC4-201ENST00000370828 SDR42E1Q8WUS8 393 aa13.78□□□□□ -0.2
GPC4-201ENST00000370828 CHP1Q99653 195 aa13.78□□□□□ -0.2
GPC4-201ENST00000370828 AZI2Q9H6S1 392 aa13.78□□□□□ -0.2
GPC4-201ENST00000370828 AATFQ9NY61 560 aaKnown RBP eCLIP13.78□□□□□ -0.2
GPC4-201ENST00000370828 BCAP29Q9UHQ4 241 aa13.78□□□□□ -0.2
GPC4-201ENST00000370828 SART1O43290 800 aaKnown RBP13.78□□□□□ -0.2
GPC4-201ENST00000370828 TFAP4Q01664 338 aa13.78□□□□□ -0.2
GPC4-201ENST00000370828 TC2NQ8N9U0 490 aa13.78□□□□□ -0.2
GPC4-201ENST00000370828 OSBP2Q969R2 916 aa13.78□□□□□ -0.2
GPC4-201ENST00000370828 NDST4Q9H3R1 872 aa13.78□□□□□ -0.2
GPC4-201ENST00000370828 ANGPTL2Q9UKU9 493 aa13.78□□□□□ -0.2
GPC4-201ENST00000370828 MED23Q9ULK4 1368 aa13.78□□□□□ -0.2
GPC4-201ENST00000370828 PTPREP23469 700 aa13.78□□□□□ -0.2
GPC4-201ENST00000370828 ADCY7P51828 1080 aa13.78□□□□□ -0.2
GPC4-201ENST00000370828 TRPC3Q13507 836 aa13.78□□□□□ -0.2
GPC4-201ENST00000370828 TRIP13Q15645 432 aaPredicted RBP13.78□□□□□ -0.2
GPC4-201ENST00000370828 GEN1Q17RS7 908 aa13.78□□□□□ -0.2
GPC4-201ENST00000370828 HNRNPLLQ8WVV9 542 aaKnown RBP13.78□□□□□ -0.2
GPC4-201ENST00000370828 LBHD1Q9BQE6 289 aaPredicted RBP13.78□□□□□ -0.2
GPC4-201ENST00000370828 KIF9Q9HAQ2 790 aa13.78□□□□□ -0.2
GPC4-201ENST00000370828 FGGP02679 453 aa13.78□□□□□ -0.2
GPC4-201ENST00000370828 PHBP35232 272 aa13.78□□□□□ -0.2
GPC4-201ENST00000370828 CUL4BQ13620 913 aa13.78□□□□□ -0.2
GPC4-201ENST00000370828 CRYMQ14894 314 aa13.78□□□□□ -0.2
GPC4-201ENST00000370828 CASC4Q6P4E1 433 aa13.78□□□□□ -0.2
GPC4-201ENST00000370828 IP6K1Q92551 441 aa13.78□□□□□ -0.2
GPC4-201ENST00000370828 ZNF496Q96IT1 587 aaPredicted RBP13.78□□□□□ -0.2
GPC4-201ENST00000370828 NUDCD1Q96RS6 583 aa13.78□□□□□ -0.2
GPC4-201ENST00000370828 DDX47Q9H0S4 455 aaKnown RBP13.78□□□□□ -0.2
GPC4-201ENST00000370828 NIP7Q9Y221 180 aaKnown RBP eCLIP13.78□□□□□ -0.2
GPC4-201ENST00000370828 MAGI3Q5TCQ9 1506 aa13.77□□□□□ -0.2
GPC4-201ENST00000370828 LGALS16A8MUM7 142 aa13.77□□□□□ -0.2
GPC4-201ENST00000370828 ATF7P17544 494 aaPredicted RBP13.77□□□□□ -0.2
GPC4-201ENST00000370828 DEUP1Q05D60 604 aa13.77□□□□□ -0.2
GPC4-201ENST00000370828 PPP2R5DQ14738 602 aa13.77□□□□□ -0.2
GPC4-201ENST00000370828 SHC4Q6S5L8 630 aa13.77□□□□□ -0.2
GPC4-201ENST00000370828 KLHL23Q8NBE8 558 aa13.77□□□□□ -0.2
GPC4-201ENST00000370828 HIPK4Q8NE63 616 aa13.77□□□□□ -0.2
GPC4-201ENST00000370828 PACSIN2Q9UNF0 486 aaPredicted RBP13.77□□□□□ -0.2
GPC4-201ENST00000370828 ZNF148Q9UQR1 794 aa13.77□□□□□ -0.2
GPC4-201ENST00000370828 NUB1Q9Y5A7 615 aa13.77□□□□□ -0.2
GPC4-201ENST00000370828 ADORA1P30542 326 aa13.77□□□□□ -0.21
GPC4-201ENST00000370828 GRAMD1BQ3KR37 738 aa13.77□□□□□ -0.21
GPC4-201ENST00000370828 FNBP1Q96RU3 617 aa13.77□□□□□ -0.21
GPC4-201ENST00000370828 FUCA2Q9BTY2 467 aa13.77□□□□□ -0.21
GPC4-201ENST00000370828 SPZ1Q9BXG8 430 aa13.77□□□□□ -0.21
GPC4-201ENST00000370828 SKAP2O75563 359 aaPredicted RBP13.77□□□□□ -0.21
GPC4-201ENST00000370828 CA4P22748 312 aa13.77□□□□□ -0.21
GPC4-201ENST00000370828 EP400NLQ6ZTU2 488 aa13.77□□□□□ -0.21
GPC4-201ENST00000370828 LONP2Q86WA8 852 aa13.77□□□□□ -0.21
GPC4-201ENST00000370828 FBXL5Q9UKA1 691 aa13.77□□□□□ -0.21
GPC4-201ENST00000370828 TSC22D4Q9Y3Q8 395 aa13.77□□□□□ -0.21
GPC4-201ENST00000370828 TRPM2O94759 1503 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms