RNA–Protein interactions for RNA: ENST00000369407.3

PHGDH-201, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 3,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-201ENST00000369407 QPCTQ16769 361 aa13.58□□□□□ -0.24
PHGDH-201ENST00000369407 CCDC40Q4G0X9 1142 aa13.58□□□□□ -0.24
PHGDH-201ENST00000369407 NOC3LQ8WTT2 800 aaKnown RBP13.58□□□□□ -0.24
PHGDH-201ENST00000369407 TIAM2Q8IVF5 1701 aa13.58□□□□□ -0.24
PHGDH-201ENST00000369407 BAZ2AQ9UIF9 1905 aaKnown RBP13.58□□□□□ -0.24
PHGDH-201ENST00000369407 PAK2Q13177 524 aa13.57□□□□□ -0.24
PHGDH-201ENST00000369407 FAM114A1Q8IWE2 563 aa13.57□□□□□ -0.24
PHGDH-201ENST00000369407 ATP6V1G3Q96LB4 118 aa13.57□□□□□ -0.24
PHGDH-201ENST00000369407 CCDC114Q96M63 670 aa13.57□□□□□ -0.24
PHGDH-201ENST00000369407 GDF3Q9NR23 364 aa13.57□□□□□ -0.24
PHGDH-201ENST00000369407 KLRC1P26715 233 aa13.57□□□□□ -0.24
PHGDH-201ENST00000369407 RDXP35241 583 aaKnown RBP13.57□□□□□ -0.24
PHGDH-201ENST00000369407 IGHMBP2P38935 993 aaKnown RBP13.57□□□□□ -0.24
PHGDH-201ENST00000369407 E2F5Q15329 346 aa13.57□□□□□ -0.24
PHGDH-201ENST00000369407 SLC35G1Q2M3R5 365 aa13.57□□□□□ -0.24
PHGDH-201ENST00000369407 ZNF572Q7Z3I7 529 aaPredicted RBP13.57□□□□□ -0.24
PHGDH-201ENST00000369407 ZSCAN29Q8IWY8 852 aaPredicted RBP13.57□□□□□ -0.24
PHGDH-201ENST00000369407 SCLT1Q96NL6 688 aa13.57□□□□□ -0.24
PHGDH-201ENST00000369407 SLC40A1Q9NP59 571 aa13.57□□□□□ -0.24
PHGDH-201ENST00000369407 PARP4Q9UKK3 1724 aaKnown RBP13.57□□□□□ -0.24
PHGDH-201ENST00000369407 PRLRP16471 622 aa13.57□□□□□ -0.24
PHGDH-201ENST00000369407 NAIF1Q69YI7 327 aaPredicted RBP13.57□□□□□ -0.24
PHGDH-201ENST00000369407 BAP1Q92560 729 aa13.57□□□□□ -0.24
PHGDH-201ENST00000369407 SGSM3Q96HU1 749 aa13.57□□□□□ -0.24
PHGDH-201ENST00000369407 CALR3Q96L12 384 aaKnown RBP13.57□□□□□ -0.24
PHGDH-201ENST00000369407 AP1M1Q9BXS5 423 aa13.57□□□□□ -0.24
PHGDH-201ENST00000369407 LRRC4CQ9HCJ2 640 aa13.57□□□□□ -0.24
PHGDH-201ENST00000369407 TCP11L1Q9NUJ3 509 aa13.57□□□□□ -0.24
PHGDH-201ENST00000369407 FLT1P17948 1338 aa13.56□□□□□ -0.24
PHGDH-201ENST00000369407 A0A1W2PQJ5 194 aa13.56□□□□□ -0.24
PHGDH-201ENST00000369407 CYP19A1P11511 503 aaPredicted RBP13.56□□□□□ -0.24
PHGDH-201ENST00000369407 CALML3P27482 149 aa13.56□□□□□ -0.24
PHGDH-201ENST00000369407 EVA1CP58658 441 aa13.56□□□□□ -0.24
PHGDH-201ENST00000369407 CDK17Q00537 523 aa13.56□□□□□ -0.24
PHGDH-201ENST00000369407 ITGB3BPQ13352 177 aaPredicted RBP13.56□□□□□ -0.24
PHGDH-201ENST00000369407 NKX1-1Q15270 411 aaPredicted RBP13.56□□□□□ -0.24
PHGDH-201ENST00000369407 ODF2Q5BJF6 829 aa13.56□□□□□ -0.24
PHGDH-201ENST00000369407 RCSD1Q6JBY9 416 aa13.56□□□□□ -0.24
PHGDH-201ENST00000369407 CCDC47Q96A33 483 aaKnown RBP13.56□□□□□ -0.24
PHGDH-201ENST00000369407 CYFIP2Q96F07 1278 aa13.56□□□□□ -0.24
PHGDH-201ENST00000369407 DYNLL2Q96FJ2 89 aa13.56□□□□□ -0.24
PHGDH-201ENST00000369407 HAUS2Q9NVX0 235 aa13.56□□□□□ -0.24
PHGDH-201ENST00000369407 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.56□□□□□ -0.24
PHGDH-201ENST00000369407 ZBTB12Q9Y330 459 aaPredicted RBP13.56□□□□□ -0.24
PHGDH-201ENST00000369407 USP17L3A6NCW0 530 aa13.56□□□□□ -0.24
PHGDH-201ENST00000369407 USP17L4A6NCW7 530 aa13.56□□□□□ -0.24
PHGDH-201ENST00000369407 DCDC2CA8MYV0 355 aa13.56□□□□□ -0.24
PHGDH-201ENST00000369407 TXKP42681 527 aa13.56□□□□□ -0.24
PHGDH-201ENST00000369407 ITIH3Q06033 890 aa13.56□□□□□ -0.24
PHGDH-201ENST00000369407 MICALCLQ6ZW33 695 aa13.56□□□□□ -0.24
PHGDH-201ENST00000369407 USP17L1Q7RTZ2 530 aa13.56□□□□□ -0.24
PHGDH-201ENST00000369407 VCPKMTQ9H867 229 aa13.56□□□□□ -0.24
PHGDH-201ENST00000369407 VAT1LQ9HCJ6 419 aa13.56□□□□□ -0.24
PHGDH-201ENST00000369407 OPLAHO14841 1288 aa13.55□□□□□ -0.24
PHGDH-201ENST00000369407 USP17L8P0C7I0 530 aa13.55□□□□□ -0.24
PHGDH-201ENST00000369407 TBC1D5Q92609 795 aa13.55□□□□□ -0.24
PHGDH-201ENST00000369407 TBC1D7Q9P0N9 293 aa13.55□□□□□ -0.24
PHGDH-201ENST00000369407 COL18A1P39060 1754 aa13.55□□□□□ -0.24
PHGDH-201ENST00000369407 GOLGA6L7A0A1B0GV03 622 aa13.55□□□□□ -0.24
PHGDH-201ENST00000369407 DNM1LO00429 736 aa13.55□□□□□ -0.24
PHGDH-201ENST00000369407 IRF6O14896 467 aa13.55□□□□□ -0.24
PHGDH-201ENST00000369407 TLR2O60603 784 aa13.55□□□□□ -0.24
PHGDH-201ENST00000369407 KLRK1P26718 216 aa13.55□□□□□ -0.24
PHGDH-201ENST00000369407 FLT3P36888 993 aa13.55□□□□□ -0.24
PHGDH-201ENST00000369407 TFAP4Q01664 338 aa13.55□□□□□ -0.24
PHGDH-201ENST00000369407 HGSNATQ68CP4 663 aa13.55□□□□□ -0.24
PHGDH-201ENST00000369407 CCSER1Q9C0I3 900 aa13.55□□□□□ -0.24
PHGDH-201ENST00000369407 TNS2Q63HR2 1409 aa13.55□□□□□ -0.24
PHGDH-201ENST00000369407 KCNK3O14649 394 aa13.55□□□□□ -0.24
PHGDH-201ENST00000369407 CYTH3O43739 400 aa13.55□□□□□ -0.24
PHGDH-201ENST00000369407 POLR2FP61218 127 aaKnown RBP13.55□□□□□ -0.24
PHGDH-201ENST00000369407 ERVK-9P63128 1117 aa13.55□□□□□ -0.24
PHGDH-201ENST00000369407 PDXDC1Q6P996 788 aa13.55□□□□□ -0.24
PHGDH-201ENST00000369407 CCDC121Q6ZUS5 278 aa13.55□□□□□ -0.24
PHGDH-201ENST00000369407 PNMA1Q8ND90 353 aa13.55□□□□□ -0.24
PHGDH-201ENST00000369407 N4BP2L2Q92802 583 aaPredicted RBP13.55□□□□□ -0.24
PHGDH-201ENST00000369407 NEUROG2Q9H2A3 272 aa13.55□□□□□ -0.24
PHGDH-201ENST00000369407 DDX20Q9UHI6 824 aaKnown RBP13.55□□□□□ -0.24
PHGDH-201ENST00000369407 ADAMTS1Q9UHI8 967 aa13.55□□□□□ -0.24
PHGDH-201ENST00000369407 MYMKA6NI61 221 aa13.54□□□□□ -0.24
PHGDH-201ENST00000369407 SKAP2O75563 359 aaPredicted RBP13.54□□□□□ -0.24
PHGDH-201ENST00000369407 FAM107AO95990 144 aa13.54□□□□□ -0.24
PHGDH-201ENST00000369407 PAX7P23759 505 aa13.54□□□□□ -0.24
PHGDH-201ENST00000369407 HNRNPH3P31942 346 aaKnown RBP13.54□□□□□ -0.24
PHGDH-201ENST00000369407 HSD17B3P37058 310 aa13.54□□□□□ -0.24
PHGDH-201ENST00000369407 KCNMA1Q12791 1236 aa13.54□□□□□ -0.24
PHGDH-201ENST00000369407 FIGNQ5HY92 759 aa13.54□□□□□ -0.24
PHGDH-201ENST00000369407 OSBPL7Q9BZF2 842 aa13.54□□□□□ -0.24
PHGDH-201ENST00000369407 DCP1AQ9NPI6 582 aaPredicted RBP13.54□□□□□ -0.24
PHGDH-201ENST00000369407 GOLGA6L10A6NI86 522 aa13.54□□□□□ -0.24
PHGDH-201ENST00000369407 PHF20L1A8MW92 1017 aa13.54□□□□□ -0.24
PHGDH-201ENST00000369407 KIAA0753Q2KHM9 967 aa13.54□□□□□ -0.24
PHGDH-201ENST00000369407 UBLCP1Q8WVY7 318 aaPredicted RBP13.54□□□□□ -0.24
PHGDH-201ENST00000369407 GJA10Q969M2 543 aa13.54□□□□□ -0.24
PHGDH-201ENST00000369407 CNOT8Q9UFF9 292 aaKnown RBP13.54□□□□□ -0.24
PHGDH-201ENST00000369407 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.54□□□□□ -0.24
PHGDH-201ENST00000369407 CHUKO15111 745 aa13.53□□□□□ -0.24
PHGDH-201ENST00000369407 OR52Z1P0C646 297 aa13.53□□□□□ -0.24
PHGDH-201ENST00000369407 CDR1P51861 262 aa13.53□□□□□ -0.24
PHGDH-201ENST00000369407 RAPGEF1Q13905 1077 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms