RNA–Protein interactions for RNA: ENST00000369258.8

CHD1L-202, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1L, Length 2,967 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-202ENST00000369258 NDST4Q9H3R1 872 aa14.29□□□□□ -0.12
CHD1L-202ENST00000369258 DOCK2Q92608 1830 aa14.29□□□□□ -0.12
CHD1L-202ENST00000369258 USP17L5A8MUK1 530 aa14.28□□□□□ -0.12
CHD1L-202ENST00000369258 M0R2N6 131 aa14.28□□□□□ -0.12
CHD1L-202ENST00000369258 OPA1O60313 960 aa14.28□□□□□ -0.12
CHD1L-202ENST00000369258 PCP11498 1178 aaKnown RBP14.28□□□□□ -0.12
CHD1L-202ENST00000369258 CCNE1P24864 410 aa14.28□□□□□ -0.12
CHD1L-202ENST00000369258 MAGEA1P43355 309 aa14.28□□□□□ -0.12
CHD1L-202ENST00000369258 GUCY2DQ02846 1103 aa14.28□□□□□ -0.12
CHD1L-202ENST00000369258 LRRC4CQ9HCJ2 640 aa14.28□□□□□ -0.12
CHD1L-202ENST00000369258 HYOU1Q9Y4L1 999 aa14.28□□□□□ -0.12
CHD1L-202ENST00000369258 BICDL2A1A5D9 508 aa14.28□□□□□ -0.12
CHD1L-202ENST00000369258 GOLGA8KD6RF30 607 aa14.28□□□□□ -0.12
CHD1L-202ENST00000369258 HPDP32754 393 aaPredicted RBP14.28□□□□□ -0.12
CHD1L-202ENST00000369258 KIF5BP33176 963 aa14.28□□□□□ -0.12
CHD1L-202ENST00000369258 SLC16A2P36021 539 aa14.28□□□□□ -0.12
CHD1L-202ENST00000369258 RPS8P62241 208 aaKnown RBP14.28□□□□□ -0.12
CHD1L-202ENST00000369258 EHHADHQ08426 723 aa14.28□□□□□ -0.12
CHD1L-202ENST00000369258 HAUS3Q68CZ6 603 aa14.28□□□□□ -0.12
CHD1L-202ENST00000369258 ZNF444Q8N0Y2 327 aaPredicted RBP14.28□□□□□ -0.12
CHD1L-202ENST00000369258 EPB41L5Q9HCM4 733 aa14.28□□□□□ -0.12
CHD1L-202ENST00000369258 GPCPD1Q9NPB8 672 aa14.28□□□□□ -0.12
CHD1L-202ENST00000369258 FAM169AQ9Y6X4 670 aa14.28□□□□□ -0.12
CHD1L-202ENST00000369258 ERLIN2O94905 339 aa14.28□□□□□ -0.12
CHD1L-202ENST00000369258 MYL1P05976 194 aa14.28□□□□□ -0.12
CHD1L-202ENST00000369258 OR52Z1P0C646 297 aa14.28□□□□□ -0.12
CHD1L-202ENST00000369258 ACTN1P12814 892 aa14.28□□□□□ -0.12
CHD1L-202ENST00000369258 CACNA2D4Q7Z3S7 1137 aa14.28□□□□□ -0.12
CHD1L-202ENST00000369258 ZIM3Q96PE6 472 aa14.28□□□□□ -0.12
CHD1L-202ENST00000369258 TLR10Q9BXR5 811 aa14.28□□□□□ -0.12
CHD1L-202ENST00000369258 SH2D4AQ9H788 454 aa14.28□□□□□ -0.12
CHD1L-202ENST00000369258 CENPFP49454 3210 aa14.27□□□□□ -0.12
CHD1L-202ENST00000369258 IRX3P78415 501 aaPredicted RBP14.27□□□□□ -0.12
CHD1L-202ENST00000369258 MKRN4PQ13434 485 aaPredicted RBP14.27□□□□□ -0.12
CHD1L-202ENST00000369258 PICALMQ13492 652 aa14.27□□□□□ -0.12
CHD1L-202ENST00000369258 DDB1Q16531 1140 aa14.27□□□□□ -0.12
CHD1L-202ENST00000369258 GBP6Q6ZN66 633 aa14.27□□□□□ -0.12
CHD1L-202ENST00000369258 LINC00116Q8NCU8 138 aa14.27□□□□□ -0.12
CHD1L-202ENST00000369258 CCDC43Q96MW1 224 aaKnown RBP14.27□□□□□ -0.12
CHD1L-202ENST00000369258 KRT12Q99456 494 aa14.27□□□□□ -0.12
CHD1L-202ENST00000369258 BLOC1S4Q9NUP1 217 aa14.27□□□□□ -0.12
CHD1L-202ENST00000369258 BSDC1Q9NW68 430 aaPredicted RBP14.27□□□□□ -0.12
CHD1L-202ENST00000369258 ADAMTS1Q9UHI8 967 aa14.27□□□□□ -0.12
CHD1L-202ENST00000369258 CPP00450 1065 aa14.27□□□□□ -0.13
CHD1L-202ENST00000369258 FGRP09769 529 aa14.27□□□□□ -0.13
CHD1L-202ENST00000369258 TNNI2P48788 182 aa14.27□□□□□ -0.13
CHD1L-202ENST00000369258 POLR2FP61218 127 aaKnown RBP14.27□□□□□ -0.13
CHD1L-202ENST00000369258 SHROOM1Q2M3G4 852 aaPredicted RBP14.27□□□□□ -0.13
CHD1L-202ENST00000369258 TMED8Q6PL24 325 aaPredicted RBP14.27□□□□□ -0.13
CHD1L-202ENST00000369258 BARHL2Q9NY43 387 aa14.27□□□□□ -0.13
CHD1L-202ENST00000369258 EIF3HO15372 352 aaKnown RBP eCLIP14.26□□□□□ -0.131e-6■■■■□ 23.8
CHD1L-202ENST00000369258 HSF2BPO75031 334 aa14.26□□□□□ -0.13
CHD1L-202ENST00000369258 PAFAH1B1P43034 410 aa14.26□□□□□ -0.13
CHD1L-202ENST00000369258 SNAP25P60880 206 aa14.26□□□□□ -0.13
CHD1L-202ENST00000369258 CDK17Q00537 523 aa14.26□□□□□ -0.13
CHD1L-202ENST00000369258 GRB10Q13322 594 aa14.26□□□□□ -0.13
CHD1L-202ENST00000369258 UBE4AQ14139 1066 aa14.26□□□□□ -0.13
CHD1L-202ENST00000369258 C12orf60Q5U649 245 aa14.26□□□□□ -0.13
CHD1L-202ENST00000369258 FBXO33Q7Z6M2 555 aa14.26□□□□□ -0.13
CHD1L-202ENST00000369258 ADAT2Q7Z6V5 191 aaKnown RBP14.26□□□□□ -0.13
CHD1L-202ENST00000369258 ALS2CR12Q96Q35 445 aa14.26□□□□□ -0.13
CHD1L-202ENST00000369258 CCSER1Q9C0I3 900 aa14.26□□□□□ -0.13
CHD1L-202ENST00000369258 ORC4O43929 436 aa14.26□□□□□ -0.13
CHD1L-202ENST00000369258 TLR2O60603 784 aa14.26□□□□□ -0.13
CHD1L-202ENST00000369258 PALMO75781 387 aa14.26□□□□□ -0.13
CHD1L-202ENST00000369258 GUCY2CP25092 1073 aa14.26□□□□□ -0.13
CHD1L-202ENST00000369258 KLRC1P26715 233 aa14.26□□□□□ -0.13
CHD1L-202ENST00000369258 VWA3BQ502W6 1294 aa14.26□□□□□ -0.13
CHD1L-202ENST00000369258 MMS22LQ6ZRQ5 1243 aa14.26□□□□□ -0.13
CHD1L-202ENST00000369258 CEP95Q96GE4 821 aa14.26□□□□□ -0.13
CHD1L-202ENST00000369258 ERGIC2Q96RQ1 377 aa14.26□□□□□ -0.13
CHD1L-202ENST00000369258 AP1M1Q9BXS5 423 aa14.26□□□□□ -0.13
CHD1L-202ENST00000369258 SIK3Q9Y2K2 1263 aa14.26□□□□□ -0.13
CHD1L-202ENST00000369258 GRIN2DO15399 1336 aa14.26□□□□□ -0.13
CHD1L-202ENST00000369258 MYO1FO00160 1098 aa14.25□□□□□ -0.13
CHD1L-202ENST00000369258 EDIL3O43854 480 aa14.25□□□□□ -0.13
CHD1L-202ENST00000369258 ATP2C2O75185 946 aa14.25□□□□□ -0.13
CHD1L-202ENST00000369258 TCP1P17987 556 aaKnown RBP14.25□□□□□ -0.13
CHD1L-202ENST00000369258 EPHB4P54760 987 aa14.25□□□□□ -0.13
CHD1L-202ENST00000369258 KCNMA1Q12791 1236 aa14.25□□□□□ -0.13
CHD1L-202ENST00000369258 C8orf74Q6P047 294 aa14.25□□□□□ -0.13
CHD1L-202ENST00000369258 FAM133AQ8N9E0 248 aa14.25□□□□□ -0.13
CHD1L-202ENST00000369258 TBC1D5Q92609 795 aa14.25□□□□□ -0.13
CHD1L-202ENST00000369258 DDX12PQ92771 950 aa14.25□□□□□ -0.13
CHD1L-202ENST00000369258 PNMA5Q96PV4 448 aa14.25□□□□□ -0.13
CHD1L-202ENST00000369258 TRAF5O00463 557 aa14.25□□□□□ -0.13
CHD1L-202ENST00000369258 KLHDC7AQ5VTJ3 777 aa14.25□□□□□ -0.13
CHD1L-202ENST00000369258 NBPF5PQ86XG9 351 aaPredicted RBP14.25□□□□□ -0.13
CHD1L-202ENST00000369258 STIM2Q9P246 746 aa14.25□□□□□ -0.13
CHD1L-202ENST00000369258 A0A1W2PQJ5 194 aa14.25□□□□□ -0.13
CHD1L-202ENST00000369258 HEXIM1O94992 359 aaKnown RBP14.25□□□□□ -0.13
CHD1L-202ENST00000369258 RASA1P20936 1047 aa14.25□□□□□ -0.13
CHD1L-202ENST00000369258 COPB2P35606 906 aa14.25□□□□□ -0.13
CHD1L-202ENST00000369258 ITIH3Q06033 890 aa14.25□□□□□ -0.13
CHD1L-202ENST00000369258 RAPGEF1Q13905 1077 aa14.25□□□□□ -0.13
CHD1L-202ENST00000369258 LLGL1Q15334 1064 aa14.25□□□□□ -0.13
CHD1L-202ENST00000369258 FIGNQ5HY92 759 aa14.25□□□□□ -0.13
CHD1L-202ENST00000369258 ALS2CLQ60I27 953 aa14.25□□□□□ -0.13
CHD1L-202ENST00000369258 TTBK2Q6IQ55 1244 aa14.25□□□□□ -0.13
CHD1L-202ENST00000369258 EMBQ6PCB8 327 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms