RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.32□□□□□ -0.6
PRDM1-201ENST00000369089 CCPG1Q9ULG6 757 aa11.32□□□□□ -0.6
PRDM1-201ENST00000369089 EDC4Q6P2E9 1401 aaKnown RBP11.32□□□□□ -0.6
PRDM1-201ENST00000369089 MSH6P52701 1360 aa11.32□□□□□ -0.6
PRDM1-201ENST00000369089 CCDC159P0C7I6 412 aa11.32□□□□□ -0.6
PRDM1-201ENST00000369089 MX2P20592 715 aa11.32□□□□□ -0.6
PRDM1-201ENST00000369089 CUL1Q13616 776 aa11.32□□□□□ -0.6
PRDM1-201ENST00000369089 ACCSLQ4AC99 568 aa11.32□□□□□ -0.6
PRDM1-201ENST00000369089 NLRP9Q7RTR0 991 aa11.32□□□□□ -0.6
PRDM1-201ENST00000369089 NOA1Q8NC60 698 aaKnown RBP11.32□□□□□ -0.6
PRDM1-201ENST00000369089 CALML6Q8TD86 181 aa11.32□□□□□ -0.6
PRDM1-201ENST00000369089 RCOR1Q9UKL0 485 aa11.32□□□□□ -0.6
PRDM1-201ENST00000369089 PCDHA7Q9UN72 937 aa11.32□□□□□ -0.6
PRDM1-201ENST00000369089 KDRP35968 1356 aa11.32□□□□□ -0.6
PRDM1-201ENST00000369089 TRPM2O94759 1503 aa11.32□□□□□ -0.6
PRDM1-201ENST00000369089 ATP5J2-PTCD1G3V325 749 aa11.32□□□□□ -0.6
PRDM1-201ENST00000369089 SMNDC1O75940 238 aaKnown RBP eCLIP11.32□□□□□ -0.6
PRDM1-201ENST00000369089 NPTXRO95502 500 aa11.32□□□□□ -0.6
PRDM1-201ENST00000369089 TUBA4AP68366 448 aa11.32□□□□□ -0.6
PRDM1-201ENST00000369089 POSTNQ15063 836 aa11.32□□□□□ -0.6
PRDM1-201ENST00000369089 PPP2R5EQ16537 467 aa11.32□□□□□ -0.6
PRDM1-201ENST00000369089 PTPN21Q16825 1174 aa11.32□□□□□ -0.6
PRDM1-201ENST00000369089 KIF2BQ8N4N8 673 aa11.32□□□□□ -0.6
PRDM1-201ENST00000369089 RETREG2Q8NC44 543 aa11.32□□□□□ -0.6
PRDM1-201ENST00000369089 BBOF1Q8ND07 529 aa11.32□□□□□ -0.6
PRDM1-201ENST00000369089 CCDC138Q96M89 665 aa11.32□□□□□ -0.6
PRDM1-201ENST00000369089 CYTH2Q99418 400 aa11.32□□□□□ -0.6
PRDM1-201ENST00000369089 SH3GL2Q99962 352 aa11.32□□□□□ -0.6
PRDM1-201ENST00000369089 NLRP1Q9C000 1473 aa11.31□□□□□ -0.6
PRDM1-201ENST00000369089 BICDL2A1A5D9 508 aa11.31□□□□□ -0.6
PRDM1-201ENST00000369089 TRIM43BA6NCK2 446 aa11.31□□□□□ -0.6
PRDM1-201ENST00000369089 SPDYE3A6NKU9 549 aa11.31□□□□□ -0.6
PRDM1-201ENST00000369089 MGEA5O60502 916 aa11.31□□□□□ -0.6
PRDM1-201ENST00000369089 SLC39A6Q13433 755 aa11.31□□□□□ -0.6
PRDM1-201ENST00000369089 METTL24Q5JXM2 366 aa11.31□□□□□ -0.6
PRDM1-201ENST00000369089 PI16Q6UXB8 463 aa11.31□□□□□ -0.6
PRDM1-201ENST00000369089 ARHGEF18Q6ZSZ5 1173 aa11.31□□□□□ -0.6
PRDM1-201ENST00000369089 STAG2Q8N3U4 1231 aa11.31□□□□□ -0.6
PRDM1-201ENST00000369089 CNBD1Q8NA66 436 aa11.31□□□□□ -0.6
PRDM1-201ENST00000369089 RPS6KC1Q96S38 1066 aa11.31□□□□□ -0.6
PRDM1-201ENST00000369089 LRRC2Q9BYS8 371 aa11.31□□□□□ -0.6
PRDM1-201ENST00000369089 CTNND2Q9UQB3 1225 aa11.31□□□□□ -0.6
PRDM1-201ENST00000369089 CMA1P23946 247 aa11.31□□□□□ -0.6
PRDM1-201ENST00000369089 HOXC9P31274 260 aa11.31□□□□□ -0.6
PRDM1-201ENST00000369089 IGHMBP2P38935 993 aaKnown RBP11.31□□□□□ -0.6
PRDM1-201ENST00000369089 COPS2P61201 443 aa11.31□□□□□ -0.6
PRDM1-201ENST00000369089 UBE3BQ7Z3V4 1068 aa11.31□□□□□ -0.6
PRDM1-201ENST00000369089 CABLES1Q8TDN4 633 aa11.31□□□□□ -0.6
PRDM1-201ENST00000369089 FHDC1Q9C0D6 1143 aaPredicted RBP11.31□□□□□ -0.6
PRDM1-201ENST00000369089 GID8Q9NWU2 228 aa11.31□□□□□ -0.6
PRDM1-201ENST00000369089 ARL2BPQ9Y2Y0 163 aa11.31□□□□□ -0.6
PRDM1-201ENST00000369089 PCDHGC5Q9Y5F6 944 aa11.31□□□□□ -0.6
PRDM1-201ENST00000369089 BACH1O14867 736 aa11.31□□□□□ -0.6
PRDM1-201ENST00000369089 MAP3K12Q12852 859 aa11.31□□□□□ -0.6
PRDM1-201ENST00000369089 TTF1Q15361 905 aaPredicted RBP11.31□□□□□ -0.6
PRDM1-201ENST00000369089 ANKRD13DQ6ZTN6 518 aa11.31□□□□□ -0.6
PRDM1-201ENST00000369089 MYOCDQ8IZQ8 938 aa11.31□□□□□ -0.6
PRDM1-201ENST00000369089 AGAP11Q8TF27 550 aa11.31□□□□□ -0.6
PRDM1-201ENST00000369089 LENG1Q96BZ8 264 aaPredicted RBP11.31□□□□□ -0.6
PRDM1-201ENST00000369089 THAP11Q96EK4 314 aa11.31□□□□□ -0.6
PRDM1-201ENST00000369089 ALG1Q9BT22 464 aa11.31□□□□□ -0.6
PRDM1-201ENST00000369089 ZBED2Q9BTP6 218 aa11.31□□□□□ -0.6
PRDM1-201ENST00000369089 POLD4Q9HCU8 107 aa11.31□□□□□ -0.6
PRDM1-201ENST00000369089 PPP1R1BQ9UD71 204 aaPredicted RBP11.31□□□□□ -0.6
PRDM1-201ENST00000369089 PASKQ96RG2 1323 aa11.31□□□□□ -0.6
PRDM1-201ENST00000369089 ATP2A1O14983 1001 aa11.3□□□□□ -0.6
PRDM1-201ENST00000369089 LMNB1P20700 586 aa11.3□□□□□ -0.6
PRDM1-201ENST00000369089 IARSP41252 1262 aaKnown RBP11.3□□□□□ -0.6
PRDM1-201ENST00000369089 AP2B1P63010 937 aa11.3□□□□□ -0.6
PRDM1-201ENST00000369089 CDR2Q01850 454 aa11.3□□□□□ -0.6
PRDM1-201ENST00000369089 ITIH4Q14624 930 aa11.3□□□□□ -0.6
PRDM1-201ENST00000369089 NDUFA5Q16718 116 aa11.3□□□□□ -0.6
PRDM1-201ENST00000369089 PPP1R15BQ5SWA1 713 aa11.3□□□□□ -0.6
PRDM1-201ENST00000369089 MTHFD1LQ6UB35 978 aa11.3□□□□□ -0.6
PRDM1-201ENST00000369089 SLF2Q8IX21 1173 aa11.3□□□□□ -0.6
PRDM1-201ENST00000369089 IQCF2Q8IXL9 164 aa11.3□□□□□ -0.6
PRDM1-201ENST00000369089 NMD3Q96D46 503 aaKnown RBP11.3□□□□□ -0.6
PRDM1-201ENST00000369089 IRX2Q9BZI1 471 aaPredicted RBP11.3□□□□□ -0.6
PRDM1-201ENST00000369089 NACAP1Q9BZK3 213 aa11.3□□□□□ -0.6
PRDM1-201ENST00000369089 GYG2O15488 501 aa11.3□□□□□ -0.6
PRDM1-201ENST00000369089 STRNO43815 780 aa11.3□□□□□ -0.6
PRDM1-201ENST00000369089 SRGAP2O75044 1071 aa11.3□□□□□ -0.6
PRDM1-201ENST00000369089 IDH1O75874 414 aaKnown RBP11.3□□□□□ -0.6
PRDM1-201ENST00000369089 DDHD2O94830 711 aa11.3□□□□□ -0.6
PRDM1-201ENST00000369089 BMP15O95972 392 aa11.3□□□□□ -0.6
PRDM1-201ENST00000369089 EEF1DP29692 281 aaKnown RBP11.3□□□□□ -0.6
PRDM1-201ENST00000369089 PMS2P54278 862 aa11.3□□□□□ -0.6
PRDM1-201ENST00000369089 MRPS15P82914 257 aaKnown RBP11.3□□□□□ -0.6
PRDM1-201ENST00000369089 GRAMD1BQ3KR37 738 aa11.3□□□□□ -0.6
PRDM1-201ENST00000369089 XPO6Q96QU8 1125 aaKnown RBP11.3□□□□□ -0.6
PRDM1-201ENST00000369089 LMCD1Q9NZU5 365 aa11.3□□□□□ -0.6
PRDM1-201ENST00000369089 USP15Q9Y4E8 981 aaPredicted RBP11.3□□□□□ -0.6
PRDM1-201ENST00000369089 TMEM2Q9UHN6 1383 aa11.3□□□□□ -0.6
PRDM1-201ENST00000369089 AOX1Q06278 1338 aa11.3□□□□□ -0.6
PRDM1-201ENST00000369089 JAK2O60674 1132 aa11.3□□□□□ -0.6
PRDM1-201ENST00000369089 NDUFA10O95299 355 aa11.3□□□□□ -0.6
PRDM1-201ENST00000369089 LTKP29376 864 aa11.3□□□□□ -0.6
PRDM1-201ENST00000369089 RAP1GDS1P52306 607 aa11.3□□□□□ -0.6
PRDM1-201ENST00000369089 RHPN1Q8TCX5 695 aa11.3□□□□□ -0.6
PRDM1-201ENST00000369089 IP6K1Q92551 441 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms