RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 OAS2P29728 719 aaKnown RBP11.93□□□□□ -0.5
TPM3-212ENST00000368533 STAT3P40763 770 aa11.93□□□□□ -0.5
TPM3-212ENST00000368533 LMAN1P49257 510 aa11.93□□□□□ -0.5
TPM3-212ENST00000368533 HMGCS2P54868 508 aa11.93□□□□□ -0.5
TPM3-212ENST00000368533 CUL4BQ13620 913 aa11.93□□□□□ -0.5
TPM3-212ENST00000368533 TEX35Q5T0J7 233 aa11.93□□□□□ -0.5
TPM3-212ENST00000368533 GMCL1P1Q8NEA9 526 aa11.93□□□□□ -0.5
TPM3-212ENST00000368533 PURBQ96QR8 312 aaKnown RBP11.93□□□□□ -0.5
TPM3-212ENST00000368533 RIC8AQ9NPQ8 531 aa11.93□□□□□ -0.5
TPM3-212ENST00000368533 NFE2L3Q9Y4A8 694 aa11.93□□□□□ -0.5
TPM3-212ENST00000368533 OR52Z1P0C646 297 aa11.93□□□□□ -0.5
TPM3-212ENST00000368533 STAT6P42226 847 aa11.93□□□□□ -0.5
TPM3-212ENST00000368533 NT5C2P49902 561 aa11.93□□□□□ -0.5
TPM3-212ENST00000368533 MRPL12P52815 198 aaKnown RBP11.93□□□□□ -0.5
TPM3-212ENST00000368533 CALCRLQ16602 461 aa11.93□□□□□ -0.5
TPM3-212ENST00000368533 ICE2Q659A1 982 aa11.93□□□□□ -0.5
TPM3-212ENST00000368533 DAGLBQ8NCG7 672 aa11.93□□□□□ -0.5
TPM3-212ENST00000368533 FERMT2Q96AC1 680 aa11.93□□□□□ -0.5
TPM3-212ENST00000368533 PAGE5Q96GU1 130 aa11.93□□□□□ -0.5
TPM3-212ENST00000368533 NUDT12Q9BQG2 462 aa11.93□□□□□ -0.5
TPM3-212ENST00000368533 RAVER2Q9HCJ3 691 aaKnown RBP11.93□□□□□ -0.5
TPM3-212ENST00000368533 POLD4Q9HCU8 107 aa11.93□□□□□ -0.5
TPM3-212ENST00000368533 MAN1B1Q9UKM7 699 aa11.93□□□□□ -0.5
TPM3-212ENST00000368533 GREB1LQ9C091 1923 aaPredicted RBP11.92□□□□□ -0.5
TPM3-212ENST00000368533 SASH3O75995 380 aa11.92□□□□□ -0.5
TPM3-212ENST00000368533 PSEN1P49768 467 aa11.92□□□□□ -0.5
TPM3-212ENST00000368533 PRR16Q569H4 304 aa11.92□□□□□ -0.5
TPM3-212ENST00000368533 FOXR1Q6PIV2 292 aa11.92□□□□□ -0.5
TPM3-212ENST00000368533 GPC2Q8N158 579 aa11.92□□□□□ -0.5
TPM3-212ENST00000368533 GMCL1Q96IK5 515 aa11.92□□□□□ -0.5
TPM3-212ENST00000368533 MTRQ99707 1265 aa11.92□□□□□ -0.5
TPM3-212ENST00000368533 ANO3Q9BYT9 981 aa11.92□□□□□ -0.5
TPM3-212ENST00000368533 ZNF408Q9H9D4 720 aa11.92□□□□□ -0.5
TPM3-212ENST00000368533 RNF216Q9NWF9 866 aaPredicted RBP11.92□□□□□ -0.5
TPM3-212ENST00000368533 MEIS2O14770 477 aa11.92□□□□□ -0.5
TPM3-212ENST00000368533 OPLAHO14841 1288 aa11.92□□□□□ -0.5
TPM3-212ENST00000368533 URI1O94763 535 aaPredicted RBP11.92□□□□□ -0.5
TPM3-212ENST00000368533 ECM2O94769 699 aaPredicted RBP11.92□□□□□ -0.5
TPM3-212ENST00000368533 TRAPPC10P48553 1259 aa11.92□□□□□ -0.5
TPM3-212ENST00000368533 TTLL12Q14166 644 aaPredicted RBP11.92□□□□□ -0.5
TPM3-212ENST00000368533 DDX25Q9UHL0 483 aaKnown RBP11.92□□□□□ -0.5
TPM3-212ENST00000368533 KCNG1Q9UIX4 513 aa11.92□□□□□ -0.5
TPM3-212ENST00000368533 LTBP3Q9NS15 1303 aa11.92□□□□□ -0.5
TPM3-212ENST00000368533 ALAS1P13196 640 aa11.91□□□□□ -0.5
TPM3-212ENST00000368533 FKBP1CQ5VVH2 108 aa11.91□□□□□ -0.5
TPM3-212ENST00000368533 TMCO3Q6UWJ1 677 aa11.91□□□□□ -0.5
TPM3-212ENST00000368533 CPLX3Q8WVH0 158 aa11.91□□□□□ -0.5
TPM3-212ENST00000368533 HPS3Q969F9 1004 aa11.91□□□□□ -0.5
TPM3-212ENST00000368533 GEMIN8Q9NWZ8 242 aaKnown RBP11.91□□□□□ -0.5
TPM3-212ENST00000368533 RRP15Q9Y3B9 282 aaKnown RBP11.91□□□□□ -0.5
TPM3-212ENST00000368533 SSBP05455 408 aaKnown RBP eCLIP11.91□□□□□ -0.5
TPM3-212ENST00000368533 ADKP55263 362 aaKnown RBP11.91□□□□□ -0.5
TPM3-212ENST00000368533 GALNT17Q6IS24 598 aa11.91□□□□□ -0.5
TPM3-212ENST00000368533 TXLNBQ8N3L3 684 aa11.91□□□□□ -0.5
TPM3-212ENST00000368533 SPDYE3A6NKU9 549 aa11.91□□□□□ -0.5
TPM3-212ENST00000368533 POTEIP0CG38 1075 aa11.91□□□□□ -0.5
TPM3-212ENST00000368533 POTEJP0CG39 1038 aa11.91□□□□□ -0.5
TPM3-212ENST00000368533 PLCG1P19174 1290 aa11.91□□□□□ -0.5
TPM3-212ENST00000368533 SMARCA1P28370 1054 aa11.91□□□□□ -0.5
TPM3-212ENST00000368533 MDM2Q00987 491 aaPredicted RBP11.91□□□□□ -0.5
TPM3-212ENST00000368533 PACS2Q86VP3 889 aa11.91□□□□□ -0.5
TPM3-212ENST00000368533 MNS1Q8NEH6 495 aa11.91□□□□□ -0.5
TPM3-212ENST00000368533 HOOK2Q96ED9 719 aa11.91□□□□□ -0.5
TPM3-212ENST00000368533 MTMR8Q96EF0 704 aa11.91□□□□□ -0.5
TPM3-212ENST00000368533 HSD3B7Q9H2F3 369 aa11.91□□□□□ -0.5
TPM3-212ENST00000368533 PICK1Q9NRD5 415 aa11.91□□□□□ -0.5
TPM3-212ENST00000368533 DACH1Q9UI36 760 aa11.91□□□□□ -0.5
TPM3-212ENST00000368533 MYH7BA7E2Y1 1941 aa11.9□□□□□ -0.5
TPM3-212ENST00000368533 BRCA2P51587 3418 aa11.9□□□□□ -0.5
TPM3-212ENST00000368533 NFIBO00712 420 aa11.9□□□□□ -0.5
TPM3-212ENST00000368533 RRAGBQ5VZM2 374 aa11.9□□□□□ -0.5
TPM3-212ENST00000368533 CABP7Q86V35 215 aa11.9□□□□□ -0.5
TPM3-212ENST00000368533 ZNF579Q8NAF0 562 aaKnown RBP11.9□□□□□ -0.5
TPM3-212ENST00000368533 PLEKHA4Q9H4M7 779 aa11.9□□□□□ -0.5
TPM3-212ENST00000368533 RPAP3Q9H6T3 665 aaPredicted RBP11.9□□□□□ -0.5
TPM3-212ENST00000368533 CCPG1Q9ULG6 757 aa11.9□□□□□ -0.5
TPM3-212ENST00000368533 CHMP2AO43633 222 aa11.9□□□□□ -0.5
TPM3-212ENST00000368533 BMP15O95972 392 aa11.9□□□□□ -0.5
TPM3-212ENST00000368533 VCAM1P19320 739 aa11.9□□□□□ -0.5
TPM3-212ENST00000368533 ZNF76P36508 570 aa11.9□□□□□ -0.5
TPM3-212ENST00000368533 TXLNAP40222 546 aa11.9□□□□□ -0.5
TPM3-212ENST00000368533 MKRN3Q13064 507 aaKnown RBP11.9□□□□□ -0.5
TPM3-212ENST00000368533 PLS1Q14651 629 aa11.9□□□□□ -0.5
TPM3-212ENST00000368533 DYMQ7RTS9 669 aa11.9□□□□□ -0.5
TPM3-212ENST00000368533 LDHDQ86WU2 507 aa11.9□□□□□ -0.5
TPM3-212ENST00000368533 VSTM4Q8IW00 320 aa11.9□□□□□ -0.5
TPM3-212ENST00000368533 ZNF526Q8TF50 670 aaPredicted RBP11.9□□□□□ -0.5
TPM3-212ENST00000368533 SAMSN1Q9NSI8 373 aaKnown RBP11.9□□□□□ -0.5
TPM3-212ENST00000368533 EMILIN3Q9NT22 766 aa11.9□□□□□ -0.5
TPM3-212ENST00000368533 TBC1D12O60347 775 aa11.89□□□□□ -0.51
TPM3-212ENST00000368533 SORBS3O60504 671 aa11.89□□□□□ -0.51
TPM3-212ENST00000368533 CACNB1Q02641 598 aaPredicted RBP11.89□□□□□ -0.51
TPM3-212ENST00000368533 SRLQ86TD4 932 aa11.89□□□□□ -0.51
TPM3-212ENST00000368533 IQUBQ8NA54 791 aa11.89□□□□□ -0.51
TPM3-212ENST00000368533 LRWD1Q9UFC0 647 aa11.89□□□□□ -0.51
TPM3-212ENST00000368533 GDAQ9Y2T3 454 aa11.89□□□□□ -0.51
TPM3-212ENST00000368533 DDX39AO00148 427 aaKnown RBP11.89□□□□□ -0.51
TPM3-212ENST00000368533 CCP110O43303 1012 aa11.89□□□□□ -0.51
TPM3-212ENST00000368533 ERCC3P19447 782 aa11.89□□□□□ -0.51
TPM3-212ENST00000368533 ARHGAP4P98171 946 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms