RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 ABHD16BQ9H3Z7 469 aa15.87■□□□□ 0.13
TPM3-211ENST00000368531 PDGFCQ9NRA1 345 aa15.87■□□□□ 0.13
TPM3-211ENST00000368531 VPS37CA5D8V6 355 aaPredicted RBP15.86■□□□□ 0.13
TPM3-211ENST00000368531 FAM205CA6NFA0 338 aa15.86■□□□□ 0.13
TPM3-211ENST00000368531 IGHA2P01877 340 aa15.86■□□□□ 0.13
TPM3-211ENST00000368531 EDNRBP24530 442 aa15.86■□□□□ 0.13
TPM3-211ENST00000368531 ZNF76P36508 570 aa15.86■□□□□ 0.13
TPM3-211ENST00000368531 MRPS9P82933 396 aaKnown RBP15.86■□□□□ 0.13
TPM3-211ENST00000368531 ARHGAP4P98171 946 aa15.86■□□□□ 0.13
TPM3-211ENST00000368531 NONOQ15233 471 aaKnown RBP eCLIP15.86■□□□□ 0.131e-7■■■■□ 26.2
TPM3-211ENST00000368531 INF2Q27J81 1249 aa15.86■□□□□ 0.13
TPM3-211ENST00000368531 EARS2Q5JPH6 523 aaKnown RBP15.86■□□□□ 0.13
TPM3-211ENST00000368531 PCNX4Q63HM2 1172 aa15.86■□□□□ 0.13
TPM3-211ENST00000368531 MCTP2Q6DN12 878 aa15.86■□□□□ 0.13
TPM3-211ENST00000368531 KRT25Q7Z3Z0 450 aa15.86■□□□□ 0.13
TPM3-211ENST00000368531 VSIG10LQ86VR7 867 aa15.86■□□□□ 0.13
TPM3-211ENST00000368531 TEX2Q8IWB9 1127 aa15.86■□□□□ 0.13
TPM3-211ENST00000368531 MORC4Q8TE76 937 aa15.86■□□□□ 0.13
TPM3-211ENST00000368531 TBCKQ8TEA7 893 aa15.86■□□□□ 0.13
TPM3-211ENST00000368531 UNC93B1Q9H1C4 597 aa15.86■□□□□ 0.13
TPM3-211ENST00000368531 HMX1Q9NP08 348 aaPredicted RBP15.86■□□□□ 0.13
TPM3-211ENST00000368531 RBM19Q9Y4C8 960 aaKnown RBP15.86■□□□□ 0.13
TPM3-211ENST00000368531 FRMPD4Q14CM0 1322 aa15.86■□□□□ 0.13
TPM3-211ENST00000368531 LOC102724159A0A0B4J2E5 919 aa15.85■□□□□ 0.13
TPM3-211ENST00000368531 EIF3JO75822 258 aaKnown RBP15.85■□□□□ 0.13
TPM3-211ENST00000368531 ZNF865P0CJ78 1059 aaPredicted RBP15.85■□□□□ 0.13
TPM3-211ENST00000368531 CYBAP13498 195 aa15.85■□□□□ 0.13
TPM3-211ENST00000368531 PDCP20941 246 aa15.85■□□□□ 0.13
TPM3-211ENST00000368531 SYT1P21579 422 aa15.85■□□□□ 0.13
TPM3-211ENST00000368531 SREBF1P36956 1147 aa15.85■□□□□ 0.13
TPM3-211ENST00000368531 PWP2Q15269 919 aaKnown RBP15.85■□□□□ 0.13
TPM3-211ENST00000368531 MAP3K21Q5TCX8 1036 aa15.85■□□□□ 0.13
TPM3-211ENST00000368531 KATNBL1Q9H079 304 aa15.85■□□□□ 0.13
TPM3-211ENST00000368531 VTA1Q9NP79 307 aa15.85■□□□□ 0.13
TPM3-211ENST00000368531 DAXXQ9UER7 740 aaPredicted RBP15.85■□□□□ 0.13
TPM3-211ENST00000368531 DOCK5Q9H7D0 1870 aa15.84■□□□□ 0.13
TPM3-211ENST00000368531 KIF28PB7ZC32 967 aa15.84■□□□□ 0.13
TPM3-211ENST00000368531 CCL5P13501 91 aa15.84■□□□□ 0.13
TPM3-211ENST00000368531 ATP2B1P20020 1258 aa15.84■□□□□ 0.13
TPM3-211ENST00000368531 ADCYAP1R1P41586 468 aa15.84■□□□□ 0.13
TPM3-211ENST00000368531 CCDC144BQ3MJ40 725 aa15.84■□□□□ 0.13
TPM3-211ENST00000368531 TMEM63BQ5T3F8 832 aa15.84■□□□□ 0.13
TPM3-211ENST00000368531 TAPT1Q6NXT6 567 aa15.84■□□□□ 0.13
TPM3-211ENST00000368531 TNFRSF25Q93038 417 aa15.84■□□□□ 0.13
TPM3-211ENST00000368531 ARMC5Q96C12 935 aa15.84■□□□□ 0.13
TPM3-211ENST00000368531 ZNF333Q96JL9 665 aa15.84■□□□□ 0.13
TPM3-211ENST00000368531 UIMC1Q96RL1 719 aa15.84■□□□□ 0.13
TPM3-211ENST00000368531 RNF208Q9H0X6 261 aa15.84■□□□□ 0.13
TPM3-211ENST00000368531 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.83■□□□□ 0.12
TPM3-211ENST00000368531 SORBS3O60504 671 aa15.83■□□□□ 0.12
TPM3-211ENST00000368531 PTGS1P23219 599 aa15.83■□□□□ 0.12
TPM3-211ENST00000368531 FOXD4L5Q5VV16 416 aaPredicted RBP15.83■□□□□ 0.12
TPM3-211ENST00000368531 FERMT3Q86UX7 667 aa15.83■□□□□ 0.12
TPM3-211ENST00000368531 CYP2W1Q8TAV3 490 aa15.83■□□□□ 0.12
TPM3-211ENST00000368531 FOXD4L4Q8WXT5 416 aaPredicted RBP15.83■□□□□ 0.12
TPM3-211ENST00000368531 LENG1Q96BZ8 264 aaPredicted RBP15.83■□□□□ 0.12
TPM3-211ENST00000368531 WDR11Q9BZH6 1224 aa15.83■□□□□ 0.12
TPM3-211ENST00000368531 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.83■□□□□ 0.12
TPM3-211ENST00000368531 FOXP1Q9H334 677 aaPredicted RBP15.83■□□□□ 0.12
TPM3-211ENST00000368531 PKD2L1Q9P0L9 805 aa15.83■□□□□ 0.12
TPM3-211ENST00000368531 FAM184BQ9ULE4 1060 aa15.83■□□□□ 0.12
TPM3-211ENST00000368531 STX6O43752 255 aa15.82■□□□□ 0.12
TPM3-211ENST00000368531 EDIL3O43854 480 aa15.82■□□□□ 0.12
TPM3-211ENST00000368531 RGS20O76081 388 aa15.82■□□□□ 0.12
TPM3-211ENST00000368531 ITGB5P18084 799 aa15.82■□□□□ 0.12
TPM3-211ENST00000368531 TNFAIP2Q03169 654 aa15.82■□□□□ 0.12
TPM3-211ENST00000368531 LETM2Q2VYF4 491 aa15.82■□□□□ 0.12
TPM3-211ENST00000368531 GJC2Q5T442 439 aaPredicted RBP15.82■□□□□ 0.12
TPM3-211ENST00000368531 XRRA1Q6P2D8 792 aa15.82■□□□□ 0.12
TPM3-211ENST00000368531 NLRX1Q86UT6 975 aa15.82■□□□□ 0.12
TPM3-211ENST00000368531 TNS4Q8IZW8 715 aa15.82■□□□□ 0.12
TPM3-211ENST00000368531 CRYGNQ8WXF5 182 aa15.82■□□□□ 0.12
TPM3-211ENST00000368531 DEFB118Q96PH6 123 aa15.82■□□□□ 0.12
TPM3-211ENST00000368531 MXRA8Q9BRK3 442 aa15.82■□□□□ 0.12
TPM3-211ENST00000368531 NRBP1Q9UHY1 535 aa15.82■□□□□ 0.12
TPM3-211ENST00000368531 UBIAD1Q9Y5Z9 338 aa15.82■□□□□ 0.12
TPM3-211ENST00000368531 MRVI1Q9Y6F6 885 aa15.82■□□□□ 0.12
TPM3-211ENST00000368531 FAM86B1E9PN63 330 aa15.81■□□□□ 0.12
TPM3-211ENST00000368531 SEPT4O43236 478 aa15.81■□□□□ 0.12
TPM3-211ENST00000368531 ADCY6O43306 1168 aa15.81■□□□□ 0.12
TPM3-211ENST00000368531 STAM2O75886 525 aa15.81■□□□□ 0.12
TPM3-211ENST00000368531 ARIH2O95376 493 aa15.81■□□□□ 0.12
TPM3-211ENST00000368531 TDP2O95551 362 aa15.81■□□□□ 0.12
TPM3-211ENST00000368531 MYCNP04198 464 aaPredicted RBP15.81■□□□□ 0.12
TPM3-211ENST00000368531 CYP3A4P08684 503 aa15.81■□□□□ 0.12
TPM3-211ENST00000368531 FAM86B2P0C5J1 330 aa15.81■□□□□ 0.12
TPM3-211ENST00000368531 TXNP10599 105 aaKnown RBP15.81■□□□□ 0.12
TPM3-211ENST00000368531 AKR1A1P14550 325 aa15.81■□□□□ 0.12
TPM3-211ENST00000368531 SMPD1P17405 629 aa15.81■□□□□ 0.12
TPM3-211ENST00000368531 USP11P51784 963 aa15.81■□□□□ 0.12
TPM3-211ENST00000368531 TTLL4Q14679 1199 aa15.81■□□□□ 0.12
TPM3-211ENST00000368531 LY6KQ17RY6 165 aa15.81■□□□□ 0.12
TPM3-211ENST00000368531 GNPTABQ3T906 1256 aa15.81■□□□□ 0.12
TPM3-211ENST00000368531 PRR16Q569H4 304 aa15.81■□□□□ 0.12
TPM3-211ENST00000368531 FRMPD3Q5JV73 1810 aa15.81■□□□□ 0.12
TPM3-211ENST00000368531 IQSEC1Q6DN90 963 aa15.81■□□□□ 0.12
TPM3-211ENST00000368531 NEK8Q86SG6 692 aa15.81■□□□□ 0.12
TPM3-211ENST00000368531 PLA2G4DQ86XP0 818 aa15.81■□□□□ 0.12
TPM3-211ENST00000368531 NOSTRINQ8IVI9 506 aa15.81■□□□□ 0.12
TPM3-211ENST00000368531 SCFD2Q8WU76 684 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms