RNA–Protein interactions for RNA: ENST00000366738.5

MRPL55-211, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 1 (best) BASIC

Gene MRPL55, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-211ENST00000366738 RABEP1Q15276 862 aa9.52□□□□□ -0.89
MRPL55-211ENST00000366738 FSCN1Q16658 493 aaKnown RBP9.52□□□□□ -0.89
MRPL55-211ENST00000366738 IGDCC4Q8TDY8 1250 aa9.52□□□□□ -0.89
MRPL55-211ENST00000366738 TRERF1Q96PN7 1200 aa9.52□□□□□ -0.89
MRPL55-211ENST00000366738 UIMC1Q96RL1 719 aa9.52□□□□□ -0.89
MRPL55-211ENST00000366738 ZSCAN10Q96SZ4 725 aaPredicted RBP9.52□□□□□ -0.89
MRPL55-211ENST00000366738 ACAD9Q9H845 621 aa9.52□□□□□ -0.89
MRPL55-211ENST00000366738 LY9Q9HBG7 655 aa9.52□□□□□ -0.89
MRPL55-211ENST00000366738 PDGFCQ9NRA1 345 aa9.52□□□□□ -0.89
MRPL55-211ENST00000366738 PDRG1Q9NUG6 133 aa9.52□□□□□ -0.89
MRPL55-211ENST00000366738 TRMT13Q9NUP7 481 aaKnown RBP9.52□□□□□ -0.89
MRPL55-211ENST00000366738 MTMR7Q9Y216 660 aa9.52□□□□□ -0.89
MRPL55-211ENST00000366738 GNEQ9Y223 722 aaKnown RBP9.52□□□□□ -0.89
MRPL55-211ENST00000366738 CYP46A1Q9Y6A2 500 aa9.52□□□□□ -0.89
MRPL55-211ENST00000366738 PTPRSQ13332 1948 aa9.52□□□□□ -0.89
MRPL55-211ENST00000366738 WDR19Q8NEZ3 1342 aa9.52□□□□□ -0.89
MRPL55-211ENST00000366738 SPTBN4Q9H254 2564 aa9.52□□□□□ -0.89
MRPL55-211ENST00000366738 TET1Q8NFU7 2136 aa9.52□□□□□ -0.89
MRPL55-211ENST00000366738 PRR33A8MZF0 331 aa9.51□□□□□ -0.89
MRPL55-211ENST00000366738 IFIT3O14879 490 aaKnown RBP9.51□□□□□ -0.89
MRPL55-211ENST00000366738 PLA2G6O60733 806 aa9.51□□□□□ -0.89
MRPL55-211ENST00000366738 CABYRO75952 493 aa9.51□□□□□ -0.89
MRPL55-211ENST00000366738 LARGE1O95461 756 aa9.51□□□□□ -0.89
MRPL55-211ENST00000366738 HMGB1P09429 215 aaKnown RBP9.51□□□□□ -0.89
MRPL55-211ENST00000366738 ALAS1P13196 640 aa9.51□□□□□ -0.89
MRPL55-211ENST00000366738 SMPD1P17405 629 aa9.51□□□□□ -0.89
MRPL55-211ENST00000366738 TAPT1Q6NXT6 567 aa9.51□□□□□ -0.89
MRPL55-211ENST00000366738 FAM160B2Q86V87 743 aa9.51□□□□□ -0.89
MRPL55-211ENST00000366738 IQCA1Q86XH1 822 aa9.51□□□□□ -0.89
MRPL55-211ENST00000366738 RAB11FIP4Q86YS3 637 aa9.51□□□□□ -0.89
MRPL55-211ENST00000366738 GDPD5Q8WTR4 605 aa9.51□□□□□ -0.89
MRPL55-211ENST00000366738 PPP1R13LQ8WUF5 828 aa9.51□□□□□ -0.89
MRPL55-211ENST00000366738 CHURC1Q8WUH1 139 aa9.51□□□□□ -0.89
MRPL55-211ENST00000366738 BRF1Q92994 677 aa9.51□□□□□ -0.89
MRPL55-211ENST00000366738 TMEM47Q9BQJ4 181 aa9.51□□□□□ -0.89
MRPL55-211ENST00000366738 UBAC1Q9BSL1 405 aa9.51□□□□□ -0.89
MRPL55-211ENST00000366738 MYL10Q9BUA6 226 aa9.51□□□□□ -0.89
MRPL55-211ENST00000366738 AGXT2Q9BYV1 514 aa9.51□□□□□ -0.89
MRPL55-211ENST00000366738 ALDH8A1Q9H2A2 487 aaPredicted RBP9.51□□□□□ -0.89
MRPL55-211ENST00000366738 TCP11L1Q9NUJ3 509 aa9.51□□□□□ -0.89
MRPL55-211ENST00000366738 CYP39A1Q9NYL5 469 aa9.51□□□□□ -0.89
MRPL55-211ENST00000366738 ISY1Q9ULR0 285 aaKnown RBP9.51□□□□□ -0.89
MRPL55-211ENST00000366738 CTDP1Q9Y5B0 961 aaPredicted RBP9.51□□□□□ -0.89
MRPL55-211ENST00000366738 TANC1Q9C0D5 1861 aa9.51□□□□□ -0.89
MRPL55-211ENST00000366738 LCHNA4D1U4 455 aa9.5□□□□□ -0.89
MRPL55-211ENST00000366738 RBAK-RBAKDNI3L0D1 243 aa9.5□□□□□ -0.89
MRPL55-211ENST00000366738 NFIBO00712 420 aa9.5□□□□□ -0.89
MRPL55-211ENST00000366738 DYNC1LI2O43237 492 aaPredicted RBP9.5□□□□□ -0.89
MRPL55-211ENST00000366738 FDX1P10109 184 aa9.5□□□□□ -0.89
MRPL55-211ENST00000366738 NHLH1Q02575 133 aa9.5□□□□□ -0.89
MRPL55-211ENST00000366738 APOBRQ0VD83 1088 aa9.5□□□□□ -0.89
MRPL55-211ENST00000366738 IKQ13123 557 aaPredicted RBP9.5□□□□□ -0.89
MRPL55-211ENST00000366738 WTAPQ15007 396 aa9.5□□□□□ -0.89
MRPL55-211ENST00000366738 EEPD1Q7L9B9 569 aa9.5□□□□□ -0.89
MRPL55-211ENST00000366738 TMCO2Q7Z6W1 182 aaPredicted RBP9.5□□□□□ -0.89
MRPL55-211ENST00000366738 HERC6Q8IVU3 1022 aa9.5□□□□□ -0.89
MRPL55-211ENST00000366738 FBXO16Q8IX29 292 aaPredicted RBP9.5□□□□□ -0.89
MRPL55-211ENST00000366738 TMEM87BQ96K49 555 aa9.5□□□□□ -0.89
MRPL55-211ENST00000366738 SLC9A7Q96T83 725 aa9.5□□□□□ -0.89
MRPL55-211ENST00000366738 AP5M1Q9H0R1 490 aa9.5□□□□□ -0.89
MRPL55-211ENST00000366738 RANBP17Q9H2T7 1088 aaKnown RBP9.5□□□□□ -0.89
MRPL55-211ENST00000366738 BRPF3Q9ULD4 1205 aa9.5□□□□□ -0.89
MRPL55-211ENST00000366738 TPCN1Q9ULQ1 816 aa9.5□□□□□ -0.89
MRPL55-211ENST00000366738 FRMPD2Q68DX3 1309 aaPredicted RBP9.5□□□□□ -0.89
MRPL55-211ENST00000366738 ZFHX2Q9C0A1 2572 aaPredicted RBP9.5□□□□□ -0.89
MRPL55-211ENST00000366738 USP34Q70CQ2 3546 aa9.49□□□□□ -0.89
MRPL55-211ENST00000366738 ICAM1P05362 532 aa9.49□□□□□ -0.89
MRPL55-211ENST00000366738 PFKMP08237 780 aa9.49□□□□□ -0.89
MRPL55-211ENST00000366738 IL9P15248 144 aa9.49□□□□□ -0.89
MRPL55-211ENST00000366738 RXRAP19793 462 aa9.49□□□□□ -0.89
MRPL55-211ENST00000366738 SSTR3P32745 418 aaPredicted RBP9.49□□□□□ -0.89
MRPL55-211ENST00000366738 NT5C2P49902 561 aa9.49□□□□□ -0.89
MRPL55-211ENST00000366738 ST3GAL1Q11201 340 aa9.49□□□□□ -0.89
MRPL55-211ENST00000366738 IFIT1BQ5T764 474 aaKnown RBP9.49□□□□□ -0.89
MRPL55-211ENST00000366738 BTNL9Q6UXG8 535 aa9.49□□□□□ -0.89
MRPL55-211ENST00000366738 NSMFQ6X4W1 530 aa9.49□□□□□ -0.89
MRPL55-211ENST00000366738 DGKHQ86XP1 1220 aa9.49□□□□□ -0.89
MRPL55-211ENST00000366738 FAM178BQ8IXR5 827 aa9.49□□□□□ -0.89
MRPL55-211ENST00000366738 GJD3Q8N144 294 aa9.49□□□□□ -0.89
MRPL55-211ENST00000366738 MORC4Q8TE76 937 aa9.49□□□□□ -0.89
MRPL55-211ENST00000366738 CLEC4DQ8WXI8 215 aa9.49□□□□□ -0.89
MRPL55-211ENST00000366738 UBE2ZQ9H832 354 aaPredicted RBP9.49□□□□□ -0.89
MRPL55-211ENST00000366738 GPCPD1Q9NPB8 672 aa9.49□□□□□ -0.89
MRPL55-211ENST00000366738 MTUS1Q9ULD2 1270 aa9.49□□□□□ -0.89
MRPL55-211ENST00000366738 CCPG1Q9ULG6 757 aa9.49□□□□□ -0.89
MRPL55-211ENST00000366738 KLF18A0A0U1RQI7 1052 aa9.48□□□□□ -0.89
MRPL55-211ENST00000366738 ERICH2A1L162 156 aa9.48□□□□□ -0.89
MRPL55-211ENST00000366738 ZEB2O60315 1214 aa9.48□□□□□ -0.89
MRPL55-211ENST00000366738 PDHBP11177 359 aa9.48□□□□□ -0.89
MRPL55-211ENST00000366738 TOP1P11387 765 aaKnown RBP9.48□□□□□ -0.89
MRPL55-211ENST00000366738 ACTN1P12814 892 aa9.48□□□□□ -0.89
MRPL55-211ENST00000366738 KCNA5P22460 613 aa9.48□□□□□ -0.89
MRPL55-211ENST00000366738 LIFRP42702 1097 aa9.48□□□□□ -0.89
MRPL55-211ENST00000366738 FGD1P98174 961 aa9.48□□□□□ -0.89
MRPL55-211ENST00000366738 BAATQ14032 418 aaPredicted RBP9.48□□□□□ -0.89
MRPL55-211ENST00000366738 SART3Q15020 963 aaKnown RBP9.48□□□□□ -0.89
MRPL55-211ENST00000366738 CCDC96Q2M329 555 aa9.48□□□□□ -0.89
MRPL55-211ENST00000366738 TKFCQ3LXA3 575 aa9.48□□□□□ -0.89
MRPL55-211ENST00000366738 APOA5Q6Q788 366 aa9.48□□□□□ -0.89
MRPL55-211ENST00000366738 SLC30A10Q6XR72 485 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms