RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 GBP3Q9H0R5 595 aa11.77□□□□□ -0.53
SMC3-201ENST00000361804 DEF6Q9H4E7 631 aa11.77□□□□□ -0.53
SMC3-201ENST00000361804 TCP11L1Q9NUJ3 509 aa11.77□□□□□ -0.53
SMC3-201ENST00000361804 CWC15Q9P013 229 aaKnown RBP11.77□□□□□ -0.53
SMC3-201ENST00000361804 PCDHA13Q9Y5I0 950 aa11.77□□□□□ -0.53
SMC3-201ENST00000361804 POLRMTO00411 1230 aaKnown RBP11.76□□□□□ -0.53
SMC3-201ENST00000361804 SLC1A4P43007 532 aa11.76□□□□□ -0.53
SMC3-201ENST00000361804 KCNB1Q14721 858 aa11.76□□□□□ -0.53
SMC3-201ENST00000361804 ECM1Q16610 540 aa11.76□□□□□ -0.53
SMC3-201ENST00000361804 PACS2Q86VP3 889 aa11.76□□□□□ -0.53
SMC3-201ENST00000361804 ARL8AQ96BM9 186 aa11.76□□□□□ -0.53
SMC3-201ENST00000361804 ANKIB1Q9P2G1 1089 aa11.76□□□□□ -0.53
SMC3-201ENST00000361804 C15orf52Q6ZUT6 534 aaKnown RBP11.76□□□□□ -0.53
SMC3-201ENST00000361804 ZNF444Q8N0Y2 327 aaPredicted RBP11.76□□□□□ -0.53
SMC3-201ENST00000361804 AKR1B10O60218 316 aa11.76□□□□□ -0.53
SMC3-201ENST00000361804 RASA1P20936 1047 aa11.76□□□□□ -0.53
SMC3-201ENST00000361804 VAV2P52735 878 aa11.76□□□□□ -0.53
SMC3-201ENST00000361804 TUBB2AQ13885 445 aa11.76□□□□□ -0.53
SMC3-201ENST00000361804 NBPF5PQ86XG9 351 aaPredicted RBP11.76□□□□□ -0.53
SMC3-201ENST00000361804 TUBB2BQ9BVA1 445 aa11.76□□□□□ -0.53
SMC3-201ENST00000361804 CCSER1Q9C0I3 900 aa11.76□□□□□ -0.53
SMC3-201ENST00000361804 BLOC1S4Q9NUP1 217 aa11.76□□□□□ -0.53
SMC3-201ENST00000361804 SAMM50Q9Y512 469 aa11.76□□□□□ -0.53
SMC3-201ENST00000361804 AFF2P51816 1311 aa11.76□□□□□ -0.53
SMC3-201ENST00000361804 SPATA31A6Q5VVP1 1343 aa11.76□□□□□ -0.53
SMC3-201ENST00000361804 USP17L5A8MUK1 530 aa11.75□□□□□ -0.53
SMC3-201ENST00000361804 SSBP05455 408 aaKnown RBP eCLIP11.75□□□□□ -0.53
SMC3-201ENST00000361804 CCT5P48643 541 aa11.75□□□□□ -0.53
SMC3-201ENST00000361804 GRB10Q13322 594 aa11.75□□□□□ -0.53
SMC3-201ENST00000361804 CERS5Q8N5B7 392 aa11.75□□□□□ -0.53
SMC3-201ENST00000361804 RBM12Q9NTZ6 932 aaKnown RBP11.75□□□□□ -0.53
SMC3-201ENST00000361804 SNX12Q9UMY4 172 aa11.75□□□□□ -0.53
SMC3-201ENST00000361804 FTCDO95954 541 aa11.75□□□□□ -0.53
SMC3-201ENST00000361804 ATP1A2P50993 1020 aa11.75□□□□□ -0.53
SMC3-201ENST00000361804 SPA17Q15506 151 aa11.75□□□□□ -0.53
SMC3-201ENST00000361804 UBE2SQ16763 222 aa11.75□□□□□ -0.53
SMC3-201ENST00000361804 SBK1Q52WX2 424 aa11.75□□□□□ -0.53
SMC3-201ENST00000361804 LRRC47Q8N1G4 583 aaKnown RBP11.75□□□□□ -0.53
SMC3-201ENST00000361804 SPATA4Q8NEY3 305 aa11.75□□□□□ -0.53
SMC3-201ENST00000361804 NDST4Q9H3R1 872 aa11.75□□□□□ -0.53
SMC3-201ENST00000361804 NPHP3-ACAD11A0A0J9YXS1 232 aa11.75□□□□□ -0.53
SMC3-201ENST00000361804 GOLGA6BA6NDN3 693 aa11.75□□□□□ -0.53
SMC3-201ENST00000361804 FAM153BP0C7A2 387 aa11.75□□□□□ -0.53
SMC3-201ENST00000361804 FAM153CQ494X1 144 aa11.75□□□□□ -0.53
SMC3-201ENST00000361804 TMED8Q6PL24 325 aaPredicted RBP11.75□□□□□ -0.53
SMC3-201ENST00000361804 NELFCDQ8IXH7 590 aa11.75□□□□□ -0.53
SMC3-201ENST00000361804 PNMA5Q96PV4 448 aa11.75□□□□□ -0.53
SMC3-201ENST00000361804 OSBPL9Q96SU4 736 aa11.75□□□□□ -0.53
SMC3-201ENST00000361804 FAM153AQ9UHL3 310 aa11.75□□□□□ -0.53
SMC3-201ENST00000361804 KRT14P02533 472 aa11.75□□□□□ -0.53
SMC3-201ENST00000361804 SHROOM1Q2M3G4 852 aaPredicted RBP11.75□□□□□ -0.53
SMC3-201ENST00000361804 TDRD12Q587J7 1177 aaKnown RBP11.75□□□□□ -0.53
SMC3-201ENST00000361804 GOLGA6L1Q8N7Z2 621 aa11.75□□□□□ -0.53
SMC3-201ENST00000361804 CEP95Q96GE4 821 aa11.75□□□□□ -0.53
SMC3-201ENST00000361804 DHTKD1Q96HY7 919 aaPredicted RBP11.75□□□□□ -0.53
SMC3-201ENST00000361804 SH2D4AQ9H788 454 aa11.75□□□□□ -0.53
SMC3-201ENST00000361804 MED4Q9NPJ6 270 aa11.75□□□□□ -0.53
SMC3-201ENST00000361804 ZNF652Q9Y2D9 606 aa11.75□□□□□ -0.53
SMC3-201ENST00000361804 SIK3Q9Y2K2 1263 aa11.75□□□□□ -0.53
SMC3-201ENST00000361804 BRCA1P38398 1863 aaKnown RBP11.75□□□□□ -0.53
SMC3-201ENST00000361804 PALM3A6NDB9 673 aaPredicted RBP11.74□□□□□ -0.53
SMC3-201ENST00000361804 UBAP1LF5GYI3 381 aa11.74□□□□□ -0.53
SMC3-201ENST00000361804 TOM1O60784 492 aa11.74□□□□□ -0.53
SMC3-201ENST00000361804 LDHBP07195 334 aaKnown RBP11.74□□□□□ -0.53
SMC3-201ENST00000361804 IL1R1P14778 569 aa11.74□□□□□ -0.53
SMC3-201ENST00000361804 PACSIN1Q9BY11 444 aa11.74□□□□□ -0.53
SMC3-201ENST00000361804 PCDHAC2Q9Y5I4 1007 aa11.74□□□□□ -0.53
SMC3-201ENST00000361804 CEP350Q5VT06 3117 aa11.74□□□□□ -0.53
SMC3-201ENST00000361804 GOLGA6CA6NDK9 693 aa11.74□□□□□ -0.53
SMC3-201ENST00000361804 GOLGA6DP0CG33 693 aa11.74□□□□□ -0.53
SMC3-201ENST00000361804 AARSP49588 968 aaKnown RBP eCLIP11.74□□□□□ -0.53
SMC3-201ENST00000361804 GUCY2FP51841 1108 aa11.74□□□□□ -0.53
SMC3-201ENST00000361804 NONOQ15233 471 aaKnown RBP eCLIP11.74□□□□□ -0.53
SMC3-201ENST00000361804 VWA3BQ502W6 1294 aa11.74□□□□□ -0.53
SMC3-201ENST00000361804 DGKHQ86XP1 1220 aa11.74□□□□□ -0.53
SMC3-201ENST00000361804 NLRP3Q96P20 1036 aa11.74□□□□□ -0.53
SMC3-201ENST00000361804 PURBQ96QR8 312 aaKnown RBP11.74□□□□□ -0.53
SMC3-201ENST00000361804 GOLGA6AQ9NYA3 693 aa11.74□□□□□ -0.53
SMC3-201ENST00000361804 GRAPQ13588 217 aa11.74□□□□□ -0.53
SMC3-201ENST00000361804 GRAPLQ8TC17 118 aaPredicted RBP11.74□□□□□ -0.53
SMC3-201ENST00000361804 IFT81Q8WYA0 676 aa11.74□□□□□ -0.53
SMC3-201ENST00000361804 EYA3Q99504 573 aa11.74□□□□□ -0.53
SMC3-201ENST00000361804 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.73□□□□□ -0.53
SMC3-201ENST00000361804 HAUS3Q68CZ6 603 aa11.73□□□□□ -0.53
SMC3-201ENST00000361804 NEK8Q86SG6 692 aa11.73□□□□□ -0.53
SMC3-201ENST00000361804 SEPT12Q8IYM1 358 aa11.73□□□□□ -0.53
SMC3-201ENST00000361804 AENQ8WTP8 325 aaKnown RBP11.73□□□□□ -0.53
SMC3-201ENST00000361804 SETDB2Q96T68 719 aa11.73□□□□□ -0.53
SMC3-201ENST00000361804 PYM1Q9BRP8 204 aaKnown RBP11.73□□□□□ -0.53
SMC3-201ENST00000361804 BCAS3Q9H6U6 928 aa11.73□□□□□ -0.53
SMC3-201ENST00000361804 GPCPD1Q9NPB8 672 aa11.73□□□□□ -0.53
SMC3-201ENST00000361804 RAD21O60216 631 aa11.73□□□□□ -0.53
SMC3-201ENST00000361804 GLI1P08151 1106 aa11.73□□□□□ -0.53
SMC3-201ENST00000361804 MAGEA1P43355 309 aa11.73□□□□□ -0.53
SMC3-201ENST00000361804 TTMPQ5BVD1 217 aa11.73□□□□□ -0.53
SMC3-201ENST00000361804 ANKS1AQ92625 1134 aa11.73□□□□□ -0.53
SMC3-201ENST00000361804 KCNQ5Q9NR82 932 aa11.73□□□□□ -0.53
SMC3-201ENST00000361804 PCP11498 1178 aaKnown RBP11.73□□□□□ -0.53
SMC3-201ENST00000361804 TNNI2P48788 182 aa11.73□□□□□ -0.53
SMC3-201ENST00000361804 CDK8P49336 464 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms