RNA–Protein interactions for RNA: ENST00000359680.9

TRAPPC2-201, Transcript of trafficking protein particle complex 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC2, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2-201ENST00000359680 ZNF34Q8IZ26 560 aa10.97□□□□□ -0.65
TRAPPC2-201ENST00000359680 C1orf131Q8NDD1 294 aaKnown RBP10.97□□□□□ -0.65
TRAPPC2-201ENST00000359680 TACO1Q9BSH4 297 aaKnown RBP10.97□□□□□ -0.65
TRAPPC2-201ENST00000359680 CARD10Q9BWT7 1032 aa10.97□□□□□ -0.65
TRAPPC2-201ENST00000359680 SEMA6BQ9H3T3 888 aa10.97□□□□□ -0.65
TRAPPC2-201ENST00000359680 KLC4Q9NSK0 619 aa10.97□□□□□ -0.65
TRAPPC2-201ENST00000359680 GGA2Q9UJY4 613 aa10.97□□□□□ -0.65
TRAPPC2-201ENST00000359680 PCDHA6Q9UN73 950 aa10.97□□□□□ -0.65
TRAPPC2-201ENST00000359680 PLAAQ9Y263 795 aa10.97□□□□□ -0.65
TRAPPC2-201ENST00000359680 PCDHA8Q9Y5H6 950 aa10.97□□□□□ -0.65
TRAPPC2-201ENST00000359680 RREB1Q92766 1687 aa10.97□□□□□ -0.65
TRAPPC2-201ENST00000359680 KAT6BQ8WYB5 2073 aa10.97□□□□□ -0.65
TRAPPC2-201ENST00000359680 FLT1P17948 1338 aa10.97□□□□□ -0.65
TRAPPC2-201ENST00000359680 GOLGA6L7A0A1B0GV03 622 aa10.97□□□□□ -0.65
TRAPPC2-201ENST00000359680 SSU72P8A0A1W2PR75 194 aa10.97□□□□□ -0.65
TRAPPC2-201ENST00000359680 GRID2IPA4D2P6 1211 aa10.97□□□□□ -0.65
TRAPPC2-201ENST00000359680 SRRM3A6NNA2 597 aaPredicted RBP10.97□□□□□ -0.65
TRAPPC2-201ENST00000359680 CYP19A1P11511 503 aaPredicted RBP10.97□□□□□ -0.65
TRAPPC2-201ENST00000359680 SMTNP53814 917 aa10.97□□□□□ -0.65
TRAPPC2-201ENST00000359680 TNNC1P63316 161 aa10.97□□□□□ -0.65
TRAPPC2-201ENST00000359680 DRP2Q13474 957 aa10.97□□□□□ -0.65
TRAPPC2-201ENST00000359680 CENPPQ6IPU0 288 aa10.97□□□□□ -0.65
TRAPPC2-201ENST00000359680 PDXDC1Q6P996 788 aa10.97□□□□□ -0.65
TRAPPC2-201ENST00000359680 KIAA0895Q8NCT3 520 aa10.97□□□□□ -0.65
TRAPPC2-201ENST00000359680 CASKIN2Q8WXE0 1202 aa10.97□□□□□ -0.65
TRAPPC2-201ENST00000359680 PIK3R5Q8WYR1 880 aa10.97□□□□□ -0.65
TRAPPC2-201ENST00000359680 HPS3Q969F9 1004 aa10.97□□□□□ -0.65
TRAPPC2-201ENST00000359680 TANGO6Q9C0B7 1094 aa10.97□□□□□ -0.65
TRAPPC2-201ENST00000359680 PPANQ9NQ55 473 aaKnown RBP10.97□□□□□ -0.65
TRAPPC2-201ENST00000359680 CASZ1Q86V15 1759 aa10.97□□□□□ -0.65
TRAPPC2-201ENST00000359680 OR52Z1P0C646 297 aa10.96□□□□□ -0.65
TRAPPC2-201ENST00000359680 ITGB3BPQ13352 177 aaPredicted RBP10.96□□□□□ -0.65
TRAPPC2-201ENST00000359680 HLTFQ14527 1009 aaKnown RBP eCLIP10.96□□□□□ -0.65
TRAPPC2-201ENST00000359680 SLC9C1Q4G0N8 1177 aa10.96□□□□□ -0.65
TRAPPC2-201ENST00000359680 PPP4R3AQ6IN85 833 aa10.96□□□□□ -0.65
TRAPPC2-201ENST00000359680 GALNT17Q6IS24 598 aa10.96□□□□□ -0.65
TRAPPC2-201ENST00000359680 HEATR3Q7Z4Q2 680 aa10.96□□□□□ -0.65
TRAPPC2-201ENST00000359680 CALML4Q96GE6 196 aa10.96□□□□□ -0.65
TRAPPC2-201ENST00000359680 CD248Q9HCU0 757 aa10.96□□□□□ -0.65
TRAPPC2-201ENST00000359680 ABCB11O95342 1321 aa10.96□□□□□ -0.66
TRAPPC2-201ENST00000359680 GCOM1H8Y6P7 765 aaPredicted RBP10.96□□□□□ -0.66
TRAPPC2-201ENST00000359680 M0R2N6 131 aa10.96□□□□□ -0.66
TRAPPC2-201ENST00000359680 ZPR1O75312 459 aa10.96□□□□□ -0.66
TRAPPC2-201ENST00000359680 PALMO75781 387 aa10.96□□□□□ -0.66
TRAPPC2-201ENST00000359680 FTCDO95954 541 aa10.96□□□□□ -0.66
TRAPPC2-201ENST00000359680 MYZAPP0CAP1 466 aa10.96□□□□□ -0.66
TRAPPC2-201ENST00000359680 GYG1P46976 350 aa10.96□□□□□ -0.66
TRAPPC2-201ENST00000359680 ATP2B2Q01814 1243 aa10.96□□□□□ -0.66
TRAPPC2-201ENST00000359680 NEDD9Q14511 834 aa10.96□□□□□ -0.66
TRAPPC2-201ENST00000359680 COBLL1Q53SF7 1204 aa10.96□□□□□ -0.66
TRAPPC2-201ENST00000359680 PAXIP1Q6ZW49 1069 aaPredicted RBP10.96□□□□□ -0.66
TRAPPC2-201ENST00000359680 BAP1Q92560 729 aa10.96□□□□□ -0.66
TRAPPC2-201ENST00000359680 CCDC114Q96M63 670 aa10.96□□□□□ -0.66
TRAPPC2-201ENST00000359680 ACTR5Q9H9F9 607 aaPredicted RBP10.96□□□□□ -0.66
TRAPPC2-201ENST00000359680 A0A1B0GUL6 1792 aa10.96□□□□□ -0.66
TRAPPC2-201ENST00000359680 COL5A2P05997 1499 aaPredicted RBP10.96□□□□□ -0.66
TRAPPC2-201ENST00000359680 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.96□□□□□ -0.66
TRAPPC2-201ENST00000359680 CACNA1SQ13698 1873 aa10.95□□□□□ -0.66
TRAPPC2-201ENST00000359680 GNAQP50148 359 aa10.95□□□□□ -0.66
TRAPPC2-201ENST00000359680 RNASE9P60153 205 aaKnown RBP10.95□□□□□ -0.66
TRAPPC2-201ENST00000359680 CDC37Q16543 378 aaPredicted RBP10.95□□□□□ -0.66
TRAPPC2-201ENST00000359680 ASTE1Q2TB18 679 aaPredicted RBP10.95□□□□□ -0.66
TRAPPC2-201ENST00000359680 SUSD4Q5VX71 490 aa10.95□□□□□ -0.66
TRAPPC2-201ENST00000359680 TMC4Q7Z404 712 aa10.95□□□□□ -0.66
TRAPPC2-201ENST00000359680 DAGLBQ8NCG7 672 aa10.95□□□□□ -0.66
TRAPPC2-201ENST00000359680 ZKSCAN4Q969J2 545 aaPredicted RBP10.95□□□□□ -0.66
TRAPPC2-201ENST00000359680 CYFIP2Q96F07 1278 aa10.95□□□□□ -0.66
TRAPPC2-201ENST00000359680 EDEM3Q9BZQ6 932 aa10.95□□□□□ -0.66
TRAPPC2-201ENST00000359680 CCNT1O60563 726 aaKnown RBP10.95□□□□□ -0.66
TRAPPC2-201ENST00000359680 ERCC3P19447 782 aa10.95□□□□□ -0.66
TRAPPC2-201ENST00000359680 HSPA9P38646 679 aaKnown RBP10.95□□□□□ -0.66
TRAPPC2-201ENST00000359680 EVX2Q03828 476 aa10.95□□□□□ -0.66
TRAPPC2-201ENST00000359680 LETM2Q2VYF4 491 aa10.95□□□□□ -0.66
TRAPPC2-201ENST00000359680 SV2BQ7L1I2 683 aa10.95□□□□□ -0.66
TRAPPC2-201ENST00000359680 KLHL7Q8IXQ5 586 aa10.95□□□□□ -0.66
TRAPPC2-201ENST00000359680 PNMA1Q8ND90 353 aa10.95□□□□□ -0.66
TRAPPC2-201ENST00000359680 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.95□□□□□ -0.66
TRAPPC2-201ENST00000359680 TAF4BQ92750 862 aa10.95□□□□□ -0.66
TRAPPC2-201ENST00000359680 CRNKL1Q9BZJ0 848 aaKnown RBP10.95□□□□□ -0.66
TRAPPC2-201ENST00000359680 NUCKS1Q9H1E3 243 aaKnown RBP10.95□□□□□ -0.66
TRAPPC2-201ENST00000359680 TAF1DQ9H5J8 278 aaPredicted RBP10.95□□□□□ -0.66
TRAPPC2-201ENST00000359680 TMBIM4Q9HC24 238 aa10.95□□□□□ -0.66
TRAPPC2-201ENST00000359680 SLC40A1Q9NP59 571 aa10.95□□□□□ -0.66
TRAPPC2-201ENST00000359680 NLRC4Q9NPP4 1024 aa10.95□□□□□ -0.66
TRAPPC2-201ENST00000359680 ZNF804BA4D1E1 1349 aa10.95□□□□□ -0.66
TRAPPC2-201ENST00000359680 RAD51CO43502 376 aa10.94□□□□□ -0.66
TRAPPC2-201ENST00000359680 TECP42680 631 aa10.94□□□□□ -0.66
TRAPPC2-201ENST00000359680 EVA1CP58658 441 aa10.94□□□□□ -0.66
TRAPPC2-201ENST00000359680 LRRC63Q05C16 580 aa10.94□□□□□ -0.66
TRAPPC2-201ENST00000359680 EHHADHQ08426 723 aa10.94□□□□□ -0.66
TRAPPC2-201ENST00000359680 CAVIN4Q5BKX8 364 aa10.94□□□□□ -0.66
TRAPPC2-201ENST00000359680 SFMBT2Q5VUG0 894 aa10.94□□□□□ -0.66
TRAPPC2-201ENST00000359680 LRIG3Q6UXM1 1119 aa10.94□□□□□ -0.66
TRAPPC2-201ENST00000359680 STAG2Q8N3U4 1231 aa10.94□□□□□ -0.66
TRAPPC2-201ENST00000359680 TSG101Q99816 390 aa10.94□□□□□ -0.66
TRAPPC2-201ENST00000359680 PLCB1Q9NQ66 1216 aa10.94□□□□□ -0.66
TRAPPC2-201ENST00000359680 DONSONQ9NYP3 566 aa10.94□□□□□ -0.66
TRAPPC2-201ENST00000359680 CEP83Q9Y592 693 aa10.94□□□□□ -0.66
TRAPPC2-201ENST00000359680 NHSL1Q5SYE7 1610 aa10.94□□□□□ -0.66
TRAPPC2-201ENST00000359680 GMNCA6NCL1 334 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms