RNA–Protein interactions for RNA: ENST00000359440.5

TMC3-201, Transcript of transmembrane channel like 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TMC3, Length 4,641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC3-201ENST00000359440 TRAPPC3LQ5T215 181 aa12.34□□□□□ -0.43
TMC3-201ENST00000359440 C6orf118Q5T5N4 469 aa12.34□□□□□ -0.43
TMC3-201ENST00000359440 FBXL16Q8N461 479 aa12.34□□□□□ -0.43
TMC3-201ENST00000359440 ARHGEF2Q92974 986 aaKnown RBP12.34□□□□□ -0.43
TMC3-201ENST00000359440 TCHPQ9BT92 498 aa12.34□□□□□ -0.43
TMC3-201ENST00000359440 PRR29P0C7W0 189 aa12.34□□□□□ -0.43
TMC3-201ENST00000359440 DHX9Q08211 1270 aaKnown RBP12.34□□□□□ -0.43
TMC3-201ENST00000359440 ARHGAP44Q17R89 818 aa12.34□□□□□ -0.43
TMC3-201ENST00000359440 MICAL1Q8TDZ2 1067 aa12.34□□□□□ -0.43
TMC3-201ENST00000359440 TBCKQ8TEA7 893 aa12.34□□□□□ -0.43
TMC3-201ENST00000359440 FMO2Q99518 471 aa12.34□□□□□ -0.43
TMC3-201ENST00000359440 AGTPBP1Q9UPW5 1226 aa12.34□□□□□ -0.43
TMC3-201ENST00000359440 I3L4J1 428 aa12.34□□□□□ -0.43
TMC3-201ENST00000359440 ERCC3P19447 782 aa12.34□□□□□ -0.43
TMC3-201ENST00000359440 PSMC2P35998 433 aaKnown RBP12.34□□□□□ -0.43
TMC3-201ENST00000359440 IL9RQ01113 521 aa12.34□□□□□ -0.43
TMC3-201ENST00000359440 FAM178BQ8IXR5 827 aa12.34□□□□□ -0.43
TMC3-201ENST00000359440 CNKSR2Q8WXI2 1034 aa12.34□□□□□ -0.43
TMC3-201ENST00000359440 MAGOHBQ96A72 148 aaKnown RBP12.34□□□□□ -0.43
TMC3-201ENST00000359440 TRIM11Q96F44 468 aa12.34□□□□□ -0.43
TMC3-201ENST00000359440 MAK16Q9BXY0 300 aaKnown RBP12.34□□□□□ -0.43
TMC3-201ENST00000359440 ATP2B4P23634 1241 aa12.33□□□□□ -0.44
TMC3-201ENST00000359440 ZNF131P52739 623 aa12.33□□□□□ -0.44
TMC3-201ENST00000359440 GYS2P54840 703 aa12.33□□□□□ -0.44
TMC3-201ENST00000359440 PLS1Q14651 629 aa12.33□□□□□ -0.44
TMC3-201ENST00000359440 OSBPL9Q96SU4 736 aa12.33□□□□□ -0.44
TMC3-201ENST00000359440 VCX3BQ9H321 246 aa12.33□□□□□ -0.44
TMC3-201ENST00000359440 H0YCG3 227 aa12.33□□□□□ -0.44
TMC3-201ENST00000359440 PSMD14O00487 310 aa12.33□□□□□ -0.44
TMC3-201ENST00000359440 GNPATO15228 680 aa12.33□□□□□ -0.44
TMC3-201ENST00000359440 THAP12O43422 761 aa12.33□□□□□ -0.44
TMC3-201ENST00000359440 CTDNEP1O95476 244 aa12.33□□□□□ -0.44
TMC3-201ENST00000359440 CLTAP09496 248 aa12.33□□□□□ -0.44
TMC3-201ENST00000359440 PPP1R21Q6ZMI0 780 aa12.33□□□□□ -0.44
TMC3-201ENST00000359440 ARHGEF18Q6ZSZ5 1173 aa12.33□□□□□ -0.44
TMC3-201ENST00000359440 REXO1L1PQ8IX06 675 aa12.33□□□□□ -0.44
TMC3-201ENST00000359440 ANKRD35Q8N283 1001 aa12.33□□□□□ -0.44
TMC3-201ENST00000359440 GUF1Q8N442 669 aaKnown RBP12.33□□□□□ -0.44
TMC3-201ENST00000359440 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.33□□□□□ -0.44
TMC3-201ENST00000359440 FDPSP14324 419 aaKnown RBP12.33□□□□□ -0.44
TMC3-201ENST00000359440 ANXA13P27216 316 aa12.33□□□□□ -0.44
TMC3-201ENST00000359440 NFU1Q9UMS0 254 aa12.33□□□□□ -0.44
TMC3-201ENST00000359440 PODXLO00592 558 aa12.33□□□□□ -0.44
TMC3-201ENST00000359440 GAS7O60861 476 aa12.33□□□□□ -0.44
TMC3-201ENST00000359440 BPIFB4P59827 614 aa12.33□□□□□ -0.44
TMC3-201ENST00000359440 TRMT1LQ7Z2T5 733 aaKnown RBP12.33□□□□□ -0.44
TMC3-201ENST00000359440 KRT26Q7Z3Y9 468 aa12.33□□□□□ -0.44
TMC3-201ENST00000359440 ANKRD42Q8N9B4 389 aa12.33□□□□□ -0.44
TMC3-201ENST00000359440 BCAP29Q9UHQ4 241 aa12.33□□□□□ -0.44
TMC3-201ENST00000359440 KIAA1024Q9UPX6 916 aa12.33□□□□□ -0.44
TMC3-201ENST00000359440 ZNF804BA4D1E1 1349 aa12.32□□□□□ -0.44
TMC3-201ENST00000359440 ARHGEF28Q8N1W1 1705 aaKnown RBP12.32□□□□□ -0.44
TMC3-201ENST00000359440 NPHP4O75161 1426 aaPredicted RBP12.32□□□□□ -0.44
TMC3-201ENST00000359440 MIF4GDA9UHW6 222 aaKnown RBP12.32□□□□□ -0.44
TMC3-201ENST00000359440 CYP27B1O15528 508 aa12.32□□□□□ -0.44
TMC3-201ENST00000359440 ATF2P15336 505 aa12.32□□□□□ -0.44
TMC3-201ENST00000359440 SNX16P57768 344 aa12.32□□□□□ -0.44
TMC3-201ENST00000359440 CCDC13Q8IYE1 715 aa12.32□□□□□ -0.44
TMC3-201ENST00000359440 AGXT2Q9BYV1 514 aa12.32□□□□□ -0.44
TMC3-201ENST00000359440 CCSER1Q9C0I3 900 aa12.32□□□□□ -0.44
TMC3-201ENST00000359440 PNMA2Q9UL42 364 aa12.32□□□□□ -0.44
TMC3-201ENST00000359440 CHMP2AO43633 222 aa12.32□□□□□ -0.44
TMC3-201ENST00000359440 ALKBH5Q6P6C2 394 aaKnown RBP12.32□□□□□ -0.44
TMC3-201ENST00000359440 RHOT2Q8IXI1 618 aa12.32□□□□□ -0.44
TMC3-201ENST00000359440 PAF1Q8N7H5 531 aa12.32□□□□□ -0.44
TMC3-201ENST00000359440 TUBB6Q9BUF5 446 aa12.32□□□□□ -0.44
TMC3-201ENST00000359440 EMILIN3Q9NT22 766 aa12.32□□□□□ -0.44
TMC3-201ENST00000359440 SNX12Q9UMY4 172 aa12.32□□□□□ -0.44
TMC3-201ENST00000359440 PLEKHA8P1O95397 391 aa12.32□□□□□ -0.44
TMC3-201ENST00000359440 FTCDO95954 541 aa12.32□□□□□ -0.44
TMC3-201ENST00000359440 CXCR5P32302 372 aa12.32□□□□□ -0.44
TMC3-201ENST00000359440 EIF6P56537 245 aaKnown RBP12.32□□□□□ -0.44
TMC3-201ENST00000359440 MAP3K21Q5TCX8 1036 aa12.32□□□□□ -0.44
TMC3-201ENST00000359440 TTC19Q6DKK2 380 aaPredicted RBP12.32□□□□□ -0.44
TMC3-201ENST00000359440 ZBTB1Q9Y2K1 713 aa12.32□□□□□ -0.44
TMC3-201ENST00000359440 RABGAP1Q9Y3P9 1069 aa12.32□□□□□ -0.44
TMC3-201ENST00000359440 SLIT1O75093 1534 aa12.32□□□□□ -0.44
TMC3-201ENST00000359440 COBLO75128 1261 aa12.31□□□□□ -0.44
TMC3-201ENST00000359440 GCKP35557 465 aa12.31□□□□□ -0.44
TMC3-201ENST00000359440 ADCY8P40145 1251 aa12.31□□□□□ -0.44
TMC3-201ENST00000359440 PDE6CP51160 858 aa12.31□□□□□ -0.44
TMC3-201ENST00000359440 PDCLQ13371 301 aa12.31□□□□□ -0.44
TMC3-201ENST00000359440 CFAP157Q5JU67 520 aa12.31□□□□□ -0.44
TMC3-201ENST00000359440 WDR93Q6P2C0 686 aa12.31□□□□□ -0.44
TMC3-201ENST00000359440 RASGRP4Q8TDF6 673 aa12.31□□□□□ -0.44
TMC3-201ENST00000359440 CHURC1Q8WUH1 139 aa12.31□□□□□ -0.44
TMC3-201ENST00000359440 TXLNGQ9NUQ3 528 aa12.31□□□□□ -0.44
TMC3-201ENST00000359440 FHOD1Q9Y613 1164 aa12.31□□□□□ -0.44
TMC3-201ENST00000359440 ITSN1Q15811 1721 aa12.31□□□□□ -0.44
TMC3-201ENST00000359440 AGLP35573 1532 aa12.31□□□□□ -0.44
TMC3-201ENST00000359440 ORC4O43929 436 aa12.31□□□□□ -0.44
TMC3-201ENST00000359440 ITIH3Q06033 890 aa12.31□□□□□ -0.44
TMC3-201ENST00000359440 DPYDQ12882 1025 aa12.31□□□□□ -0.44
TMC3-201ENST00000359440 STRN3Q13033 797 aa12.31□□□□□ -0.44
TMC3-201ENST00000359440 ENAHQ8N8S7 591 aaPredicted RBP12.31□□□□□ -0.44
TMC3-201ENST00000359440 IGDCC4Q8TDY8 1250 aa12.31□□□□□ -0.44
TMC3-201ENST00000359440 PLEKHA4Q9H4M7 779 aa12.31□□□□□ -0.44
TMC3-201ENST00000359440 SLITRK6Q9H5Y7 841 aa12.31□□□□□ -0.44
TMC3-201ENST00000359440 HPSEQ9Y251 543 aa12.31□□□□□ -0.44
TMC3-201ENST00000359440 PLAAQ9Y263 795 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms