RNA–Protein interactions for RNA: ENST00000357412.2

LINC01560-201, Transcript of long intergenic non-protein coding RNA 1560, humanhuman

BASIC

Gene LINC01560, Length 1,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560-201ENST00000357412 PPM1EQ8WY54 764 aa11.91□□□□□ -0.5
LINC01560-201ENST00000357412 EMID1Q96A84 441 aaPredicted RBP11.91□□□□□ -0.5
LINC01560-201ENST00000357412 PXMP2Q9NR77 195 aa11.91□□□□□ -0.5
LINC01560-201ENST00000357412 PCDHA11Q9Y5I1 949 aa11.91□□□□□ -0.5
LINC01560-201ENST00000357412 RGS20O76081 388 aa11.9□□□□□ -0.5
LINC01560-201ENST00000357412 CFBP00751 764 aa11.9□□□□□ -0.5
LINC01560-201ENST00000357412 CASTP20810 708 aaKnown RBP11.9□□□□□ -0.5
LINC01560-201ENST00000357412 PTH1RQ03431 593 aa11.9□□□□□ -0.5
LINC01560-201ENST00000357412 BFSP2Q13515 415 aa11.9□□□□□ -0.5
LINC01560-201ENST00000357412 PTGISQ16647 500 aa11.9□□□□□ -0.5
LINC01560-201ENST00000357412 TJAP1Q5JTD0 557 aa11.9□□□□□ -0.5
LINC01560-201ENST00000357412 PPP2R2DQ66LE6 453 aa11.9□□□□□ -0.5
LINC01560-201ENST00000357412 GDF6Q6KF10 455 aaPredicted RBP11.9□□□□□ -0.5
LINC01560-201ENST00000357412 CHST3Q7LGC8 479 aa11.9□□□□□ -0.5
LINC01560-201ENST00000357412 RETREG2Q8NC44 543 aa11.9□□□□□ -0.5
LINC01560-201ENST00000357412 DHX38Q92620 1227 aaKnown RBP11.9□□□□□ -0.5
LINC01560-201ENST00000357412 PDCD2LQ9BRP1 358 aa11.9□□□□□ -0.5
LINC01560-201ENST00000357412 SENP2Q9HC62 589 aa11.9□□□□□ -0.5
LINC01560-201ENST00000357412 NOD1Q9Y239 953 aa11.9□□□□□ -0.5
LINC01560-201ENST00000357412 SUPT16HQ9Y5B9 1047 aaKnown RBP11.9□□□□□ -0.5
LINC01560-201ENST00000357412 PCDHA1Q9Y5I3 950 aa11.9□□□□□ -0.5
LINC01560-201ENST00000357412 TAF6LQ9Y6J9 622 aa11.9□□□□□ -0.5
LINC01560-201ENST00000357412 IGFBP4P22692 258 aa11.89□□□□□ -0.51
LINC01560-201ENST00000357412 CHMLP26374 656 aa11.89□□□□□ -0.51
LINC01560-201ENST00000357412 CHMP4BP1P59074 171 aa11.89□□□□□ -0.51
LINC01560-201ENST00000357412 LAMC2Q13753 1193 aa11.89□□□□□ -0.51
LINC01560-201ENST00000357412 GRM4Q14833 912 aa11.89□□□□□ -0.51
LINC01560-201ENST00000357412 DGKDQ16760 1214 aa11.89□□□□□ -0.51
LINC01560-201ENST00000357412 TMEM67Q5HYA8 995 aa11.89□□□□□ -0.51
LINC01560-201ENST00000357412 STOX1Q6ZVD7 989 aa11.89□□□□□ -0.51
LINC01560-201ENST00000357412 VSIG10LQ86VR7 867 aa11.89□□□□□ -0.51
LINC01560-201ENST00000357412 PPTC7Q8NI37 304 aa11.89□□□□□ -0.51
LINC01560-201ENST00000357412 CAGE1Q8TC20 777 aa11.89□□□□□ -0.51
LINC01560-201ENST00000357412 PHOSPHO2Q8TCD6 241 aa11.89□□□□□ -0.51
LINC01560-201ENST00000357412 SYMPKQ92797 1274 aaKnown RBP11.89□□□□□ -0.51
LINC01560-201ENST00000357412 RIOX1Q9H6W3 641 aa11.89□□□□□ -0.51
LINC01560-201ENST00000357412 MAP3K20Q9NYL2 800 aaKnown RBP11.89□□□□□ -0.51
LINC01560-201ENST00000357412 MRVI1Q9Y6F6 885 aa11.89□□□□□ -0.51
LINC01560-201ENST00000357412 MYH8P13535 1937 aa11.89□□□□□ -0.51
LINC01560-201ENST00000357412 MUC3AQ02505 3323 aa11.89□□□□□ -0.51
LINC01560-201ENST00000357412 HAS3O00219 553 aa11.88□□□□□ -0.51
LINC01560-201ENST00000357412 IFIT3O14879 490 aaKnown RBP11.88□□□□□ -0.51
LINC01560-201ENST00000357412 CYTH3O43739 400 aa11.88□□□□□ -0.51
LINC01560-201ENST00000357412 ARHGEF15O94989 841 aa11.88□□□□□ -0.51
LINC01560-201ENST00000357412 F2P00734 622 aa11.88□□□□□ -0.51
LINC01560-201ENST00000357412 CA3P07451 260 aa11.88□□□□□ -0.51
LINC01560-201ENST00000357412 ACTN1P12814 892 aa11.88□□□□□ -0.51
LINC01560-201ENST00000357412 HOXD8P13378 290 aaPredicted RBP11.88□□□□□ -0.51
LINC01560-201ENST00000357412 HOXA13P31271 388 aaPredicted RBP11.88□□□□□ -0.51
LINC01560-201ENST00000357412 RBL2Q08999 1139 aa11.88□□□□□ -0.51
LINC01560-201ENST00000357412 TROAPQ12815 778 aa11.88□□□□□ -0.51
LINC01560-201ENST00000357412 TRDNQ13061 729 aa11.88□□□□□ -0.51
LINC01560-201ENST00000357412 CCDC85BQ15834 202 aaPredicted RBP11.88□□□□□ -0.51
LINC01560-201ENST00000357412 HOMER1Q86YM7 354 aa11.88□□□□□ -0.51
LINC01560-201ENST00000357412 SAMD3Q8N6K7 520 aa11.88□□□□□ -0.51
LINC01560-201ENST00000357412 AFAP1L1Q8TED9 768 aa11.88□□□□□ -0.51
LINC01560-201ENST00000357412 ATXN2LQ8WWM7 1075 aaKnown RBP11.88□□□□□ -0.51
LINC01560-201ENST00000357412 PIGSQ96S52 555 aa11.88□□□□□ -0.51
LINC01560-201ENST00000357412 SLC9A7Q96T83 725 aa11.88□□□□□ -0.51
LINC01560-201ENST00000357412 FTOQ9C0B1 505 aaKnown RBP eCLIP11.88□□□□□ -0.51
LINC01560-201ENST00000357412 HDAC6Q9UBN7 1215 aa11.88□□□□□ -0.51
LINC01560-201ENST00000357412 GTF2IRD1Q9UHL9 959 aa11.88□□□□□ -0.51
LINC01560-201ENST00000357412 CHD9Q3L8U1 2897 aa11.87□□□□□ -0.51
LINC01560-201ENST00000357412 E7EWF7 191 aa11.87□□□□□ -0.51
LINC01560-201ENST00000357412 SGSM2O43147 1006 aa11.87□□□□□ -0.51
LINC01560-201ENST00000357412 SELPP16109 830 aa11.87□□□□□ -0.51
LINC01560-201ENST00000357412 PSEN2P49810 448 aa11.87□□□□□ -0.51
LINC01560-201ENST00000357412 SP2Q02086 613 aa11.87□□□□□ -0.51
LINC01560-201ENST00000357412 MFSD10Q14728 455 aa11.87□□□□□ -0.51
LINC01560-201ENST00000357412 PGM5Q15124 567 aa11.87□□□□□ -0.51
LINC01560-201ENST00000357412 HSDL1Q3SXM5 330 aa11.87□□□□□ -0.51
LINC01560-201ENST00000357412 CELF3Q5SZQ8 465 aaKnown RBP11.87□□□□□ -0.51
LINC01560-201ENST00000357412 MYSM1Q5VVJ2 828 aa11.87□□□□□ -0.51
LINC01560-201ENST00000357412 HERC6Q8IVU3 1022 aa11.87□□□□□ -0.51
LINC01560-201ENST00000357412 DHX37Q8IY37 1157 aaKnown RBP11.87□□□□□ -0.51
LINC01560-201ENST00000357412 C7orf31Q8N865 590 aa11.87□□□□□ -0.51
LINC01560-201ENST00000357412 IL31RAQ8NI17 732 aa11.87□□□□□ -0.51
LINC01560-201ENST00000357412 RUFY2Q8WXA3 655 aa11.87□□□□□ -0.51
LINC01560-201ENST00000357412 ASB2Q96Q27 587 aa11.87□□□□□ -0.51
LINC01560-201ENST00000357412 THEGQ9P2T0 379 aa11.87□□□□□ -0.51
LINC01560-201ENST00000357412 ZNFX1Q9P2E3 1918 aaKnown RBP11.86□□□□□ -0.51
LINC01560-201ENST00000357412 PNMA6FA0A0J9YX94 578 aa11.86□□□□□ -0.51
LINC01560-201ENST00000357412 EPOPA6NHQ4 379 aa11.86□□□□□ -0.51
LINC01560-201ENST00000357412 GCOM1H8Y6P7 765 aaPredicted RBP11.86□□□□□ -0.51
LINC01560-201ENST00000357412 RBAK-RBAKDNI3L0D1 243 aa11.86□□□□□ -0.51
LINC01560-201ENST00000357412 RFXAPO00287 272 aa11.86□□□□□ -0.51
LINC01560-201ENST00000357412 NBNO60934 754 aa11.86□□□□□ -0.51
LINC01560-201ENST00000357412 PPFIA4O75335 1185 aa11.86□□□□□ -0.51
LINC01560-201ENST00000357412 BAIAP3O94812 1187 aa11.86□□□□□ -0.51
LINC01560-201ENST00000357412 CXCL10P02778 98 aa11.86□□□□□ -0.51
LINC01560-201ENST00000357412 POLR2MP0CAP2 368 aa11.86□□□□□ -0.51
LINC01560-201ENST00000357412 ZNF286BP0CG31 522 aa11.86□□□□□ -0.51
LINC01560-201ENST00000357412 CKBP12277 381 aa11.86□□□□□ -0.51
LINC01560-201ENST00000357412 MYCLP12524 364 aaPredicted RBP11.86□□□□□ -0.51
LINC01560-201ENST00000357412 UBA1P22314 1058 aaKnown RBP11.86□□□□□ -0.51
LINC01560-201ENST00000357412 ANTXR2P58335 489 aa11.86□□□□□ -0.51
LINC01560-201ENST00000357412 ZNF200P98182 395 aaPredicted RBP11.86□□□□□ -0.51
LINC01560-201ENST00000357412 HIC1Q14526 733 aa11.86□□□□□ -0.51
LINC01560-201ENST00000357412 WTAPQ15007 396 aa11.86□□□□□ -0.51
LINC01560-201ENST00000357412 KIAA0753Q2KHM9 967 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms