RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 PSMD6Q15008 389 aa17■□□□□ 0.31
TRAPPC11-202ENST00000357207 KSR1Q8IVT5 923 aa17■□□□□ 0.31
TRAPPC11-202ENST00000357207 MYCNP04198 464 aaPredicted RBP17■□□□□ 0.31
TRAPPC11-202ENST00000357207 HOXA7P31268 230 aaPredicted RBP17■□□□□ 0.31
TRAPPC11-202ENST00000357207 CYB5R4Q7L1T6 521 aa17■□□□□ 0.31
TRAPPC11-202ENST00000357207 TTLL11Q8NHH1 800 aa17■□□□□ 0.31
TRAPPC11-202ENST00000357207 GADD45GIP1Q8TAE8 222 aaPredicted RBP17■□□□□ 0.31
TRAPPC11-202ENST00000357207 ATP10DQ9P241 1426 aa17■□□□□ 0.31
TRAPPC11-202ENST00000357207 POC1B-GALNT4F8VUJ3 575 aa16.99■□□□□ 0.31
TRAPPC11-202ENST00000357207 CCDC188H7C350 402 aa16.99■□□□□ 0.31
TRAPPC11-202ENST00000357207 PSMC2P35998 433 aaKnown RBP16.99■□□□□ 0.31
TRAPPC11-202ENST00000357207 CACNB1Q02641 598 aaPredicted RBP16.99■□□□□ 0.31
TRAPPC11-202ENST00000357207 GPATCH4Q5T3I0 446 aaKnown RBP16.99■□□□□ 0.31
TRAPPC11-202ENST00000357207 ANKRD35Q8N283 1001 aa16.99■□□□□ 0.31
TRAPPC11-202ENST00000357207 CFAP61Q8NHU2 1237 aa16.99■□□□□ 0.31
TRAPPC11-202ENST00000357207 HEG1Q9ULI3 1381 aa16.99■□□□□ 0.31
TRAPPC11-202ENST00000357207 LRRD1A4D1F6 860 aa16.99■□□□□ 0.31
TRAPPC11-202ENST00000357207 ARHGAP42A6NI28 874 aa16.99■□□□□ 0.31
TRAPPC11-202ENST00000357207 PRR29P0C7W0 189 aa16.99■□□□□ 0.31
TRAPPC11-202ENST00000357207 USP14P54578 494 aa16.99■□□□□ 0.31
TRAPPC11-202ENST00000357207 HSPA2P54652 639 aa16.99■□□□□ 0.31
TRAPPC11-202ENST00000357207 ASPRV1Q53RT3 343 aa16.99■□□□□ 0.31
TRAPPC11-202ENST00000357207 TEKT1Q969V4 418 aa16.99■□□□□ 0.31
TRAPPC11-202ENST00000357207 VTI1AQ96AJ9 217 aa16.99■□□□□ 0.31
TRAPPC11-202ENST00000357207 IRX2Q9BZI1 471 aaPredicted RBP16.99■□□□□ 0.31
TRAPPC11-202ENST00000357207 ST7Q9NRC1 585 aa16.99■□□□□ 0.31
TRAPPC11-202ENST00000357207 ZNF804BA4D1E1 1349 aa16.99■□□□□ 0.31
TRAPPC11-202ENST00000357207 SHROOM2Q13796 1616 aa16.99■□□□□ 0.31
TRAPPC11-202ENST00000357207 TTC26A0AVF1 554 aa16.99■□□□□ 0.31
TRAPPC11-202ENST00000357207 TRIM49BA6NDI0 452 aa16.99■□□□□ 0.31
TRAPPC11-202ENST00000357207 CYP2C19P33261 490 aa16.99■□□□□ 0.31
TRAPPC11-202ENST00000357207 MAN1A1P33908 653 aa16.99■□□□□ 0.31
TRAPPC11-202ENST00000357207 SLCO1A2P46721 670 aa16.99■□□□□ 0.31
TRAPPC11-202ENST00000357207 AOC3Q16853 763 aa16.99■□□□□ 0.31
TRAPPC11-202ENST00000357207 LRRC7Q96NW7 1537 aa16.99■□□□□ 0.31
TRAPPC11-202ENST00000357207 NCOA3Q9Y6Q9 1424 aa16.99■□□□□ 0.31
TRAPPC11-202ENST00000357207 EVI5O60447 810 aa16.99■□□□□ 0.31
TRAPPC11-202ENST00000357207 BAG2O95816 211 aa16.99■□□□□ 0.31
TRAPPC11-202ENST00000357207 CDC27P30260 824 aa16.99■□□□□ 0.31
TRAPPC11-202ENST00000357207 PRCPP42785 496 aa16.99■□□□□ 0.31
TRAPPC11-202ENST00000357207 SNX16P57768 344 aa16.99■□□□□ 0.31
TRAPPC11-202ENST00000357207 MTF1Q14872 753 aa16.99■□□□□ 0.31
TRAPPC11-202ENST00000357207 STOX1Q6ZVD7 989 aa16.99■□□□□ 0.31
TRAPPC11-202ENST00000357207 SPZ1Q9BXG8 430 aa16.99■□□□□ 0.31
TRAPPC11-202ENST00000357207 AP1M1Q9BXS5 423 aa16.99■□□□□ 0.31
TRAPPC11-202ENST00000357207 ADCY10Q96PN6 1610 aa16.98■□□□□ 0.31
TRAPPC11-202ENST00000357207 KIF3CO14782 793 aa16.98■□□□□ 0.31
TRAPPC11-202ENST00000357207 RASGRF2O14827 1237 aa16.98■□□□□ 0.31
TRAPPC11-202ENST00000357207 CHUKO15111 745 aa16.98■□□□□ 0.31
TRAPPC11-202ENST00000357207 FOXN1O15353 648 aa16.98■□□□□ 0.31
TRAPPC11-202ENST00000357207 GFPT2O94808 682 aa16.98■□□□□ 0.31
TRAPPC11-202ENST00000357207 SLC8A3P57103 927 aa16.98■□□□□ 0.31
TRAPPC11-202ENST00000357207 MYL7Q01449 175 aa16.98■□□□□ 0.31
TRAPPC11-202ENST00000357207 GEN1Q17RS7 908 aa16.98■□□□□ 0.31
TRAPPC11-202ENST00000357207 NSFP46459 744 aaKnown RBP16.98■□□□□ 0.31
TRAPPC11-202ENST00000357207 BFSP1Q12934 665 aa16.98■□□□□ 0.31
TRAPPC11-202ENST00000357207 SLMAPQ14BN4 828 aa16.98■□□□□ 0.31
TRAPPC11-202ENST00000357207 SEPT2Q15019 361 aa16.98■□□□□ 0.31
TRAPPC11-202ENST00000357207 SLFN13Q68D06 897 aa16.98■□□□□ 0.31
TRAPPC11-202ENST00000357207 ARHGEF18Q6ZSZ5 1173 aa16.98■□□□□ 0.31
TRAPPC11-202ENST00000357207 TMTC3Q6ZXV5 915 aa16.98■□□□□ 0.31
TRAPPC11-202ENST00000357207 PIGSQ96S52 555 aa16.98■□□□□ 0.31
TRAPPC11-202ENST00000357207 TET3O43151 1660 aa16.98■□□□□ 0.31
TRAPPC11-202ENST00000357207 IRX4P78413 519 aa16.98■□□□□ 0.31
TRAPPC11-202ENST00000357207 FAM133BQ5BKY9 247 aaKnown RBP16.98■□□□□ 0.31
TRAPPC11-202ENST00000357207 NLRX1Q86UT6 975 aa16.98■□□□□ 0.31
TRAPPC11-202ENST00000357207 COG1Q8WTW3 980 aa16.98■□□□□ 0.31
TRAPPC11-202ENST00000357207 CFAP57Q96MR6 1250 aa16.98■□□□□ 0.31
TRAPPC11-202ENST00000357207 PLAAQ9Y263 795 aa16.98■□□□□ 0.31
TRAPPC11-202ENST00000357207 VSNL1P62760 191 aa16.97■□□□□ 0.31
TRAPPC11-202ENST00000357207 EXOSC10Q01780 885 aaKnown RBP16.97■□□□□ 0.31
TRAPPC11-202ENST00000357207 RASIP1Q5U651 963 aa16.97■□□□□ 0.31
TRAPPC11-202ENST00000357207 OTUD6AQ7L8S5 288 aa16.97■□□□□ 0.31
TRAPPC11-202ENST00000357207 OXER1Q8TDS5 423 aa16.97■□□□□ 0.31
TRAPPC11-202ENST00000357207 BCAP29Q9UHQ4 241 aa16.97■□□□□ 0.31
TRAPPC11-202ENST00000357207 CASQ2O14958 399 aaPredicted RBP16.97■□□□□ 0.31
TRAPPC11-202ENST00000357207 LRRN2O75325 713 aa16.97■□□□□ 0.31
TRAPPC11-202ENST00000357207 GMNNO75496 209 aa16.97■□□□□ 0.31
TRAPPC11-202ENST00000357207 DLATP10515 647 aaKnown RBP16.97■□□□□ 0.31
TRAPPC11-202ENST00000357207 GSPT2Q8IYD1 628 aaKnown RBP16.97■□□□□ 0.31
TRAPPC11-202ENST00000357207 AMNQ9BXJ7 453 aa16.97■□□□□ 0.31
TRAPPC11-202ENST00000357207 LAMC1P11047 1609 aa16.97■□□□□ 0.31
TRAPPC11-202ENST00000357207 USP42Q9H9J4 1324 aaKnown RBP16.97■□□□□ 0.31
TRAPPC11-202ENST00000357207 KIF28PB7ZC32 967 aa16.97■□□□□ 0.31
TRAPPC11-202ENST00000357207 DAPK3O43293 454 aa16.97■□□□□ 0.31
TRAPPC11-202ENST00000357207 ECEL1O95672 775 aa16.97■□□□□ 0.31
TRAPPC11-202ENST00000357207 LMNB2Q03252 620 aa16.97■□□□□ 0.31
TRAPPC11-202ENST00000357207 LLGL1Q15334 1064 aa16.97■□□□□ 0.31
TRAPPC11-202ENST00000357207 HADHQ16836 314 aaKnown RBP16.97■□□□□ 0.31
TRAPPC11-202ENST00000357207 MAP3K21Q5TCX8 1036 aa16.97■□□□□ 0.31
TRAPPC11-202ENST00000357207 NUF2Q9BZD4 464 aa16.97■□□□□ 0.31
TRAPPC11-202ENST00000357207 CLIC2O15247 247 aa16.97■□□□□ 0.31
TRAPPC11-202ENST00000357207 ADCY1Q08828 1119 aa16.97■□□□□ 0.31
TRAPPC11-202ENST00000357207 PPP2R5DQ14738 602 aa16.97■□□□□ 0.31
TRAPPC11-202ENST00000357207 SGO2Q562F6 1265 aa16.97■□□□□ 0.31
TRAPPC11-202ENST00000357207 FAM102BQ5T8I3 360 aa16.97■□□□□ 0.31
TRAPPC11-202ENST00000357207 METTL16Q86W50 562 aaKnown RBP16.97■□□□□ 0.31
TRAPPC11-202ENST00000357207 HDAC6Q9UBN7 1215 aa16.97■□□□□ 0.31
TRAPPC11-202ENST00000357207 KRT19P08727 400 aa16.96■□□□□ 0.31
TRAPPC11-202ENST00000357207 GAP43P17677 238 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms