RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 WDR18Q9BV38 432 aa28.81■■■□□ 2.2
CLK2-201ENST00000355560 POLR2AP24928 1970 aaKnown RBP28.81■■■□□ 2.2
CLK2-201ENST00000355560 ZNF76P36508 570 aa28.81■■■□□ 2.2
CLK2-201ENST00000355560 ECM1Q16610 540 aa28.81■■■□□ 2.2
CLK2-201ENST00000355560 RWDD2AQ9UIY3 292 aa28.81■■■□□ 2.2
CLK2-201ENST00000355560 KDM3AQ9Y4C1 1321 aa28.8■■■□□ 2.2
CLK2-201ENST00000355560 BACE1P56817 501 aa28.8■■■□□ 2.2
CLK2-201ENST00000355560 ARID5BQ14865 1188 aa28.8■■■□□ 2.2
CLK2-201ENST00000355560 KCNK18Q7Z418 384 aa28.8■■■□□ 2.2
CLK2-201ENST00000355560 LRRC8AQ8IWT6 810 aa28.8■■■□□ 2.2
CLK2-201ENST00000355560 ZNF280CQ8ND82 737 aa28.8■■■□□ 2.2
CLK2-201ENST00000355560 CCDC47Q96A33 483 aaKnown RBP28.8■■■□□ 2.2
CLK2-201ENST00000355560 RPAP3Q9H6T3 665 aaPredicted RBP28.8■■■□□ 2.2
CLK2-201ENST00000355560 CCT6AP40227 531 aaKnown RBP28.79■■■□□ 2.2
CLK2-201ENST00000355560 CYP2W1Q8TAV3 490 aa28.79■■■□□ 2.2
CLK2-201ENST00000355560 NELFBQ8WX92 580 aa28.79■■■□□ 2.2
CLK2-201ENST00000355560 KLRG1Q96E93 195 aa28.79■■■□□ 2.2
CLK2-201ENST00000355560 EXOC1Q9NV70 894 aa28.79■■■□□ 2.2
CLK2-201ENST00000355560 YBX3P16989 372 aaKnown RBP eCLIP28.79■■■□□ 2.2
CLK2-201ENST00000355560 GIMAP8Q8ND71 665 aaPredicted RBP28.79■■■□□ 2.2
CLK2-201ENST00000355560 KIAA1524Q8TCG1 905 aa28.79■■■□□ 2.2
CLK2-201ENST00000355560 NT5C3AQ9H0P0 336 aa28.79■■■□□ 2.2
CLK2-201ENST00000355560 PPP1R9AQ9ULJ8 1098 aa28.79■■■□□ 2.2
CLK2-201ENST00000355560 COBLO75128 1261 aa28.78■■■□□ 2.2
CLK2-201ENST00000355560 STAT3P40763 770 aa28.78■■■□□ 2.2
CLK2-201ENST00000355560 GSDMDP57764 484 aa28.78■■■□□ 2.2
CLK2-201ENST00000355560 SPIRE1Q08AE8 756 aa28.78■■■□□ 2.2
CLK2-201ENST00000355560 HYIQ5T013 277 aa28.78■■■□□ 2.2
CLK2-201ENST00000355560 CPXCR1Q8N123 301 aa28.78■■■□□ 2.2
CLK2-201ENST00000355560 ADSSL1Q8N142 457 aa28.78■■■□□ 2.2
CLK2-201ENST00000355560 C17orf53Q8N3J3 647 aaPredicted RBP28.78■■■□□ 2.2
CLK2-201ENST00000355560 FAM20AQ96MK3 541 aa28.78■■■□□ 2.2
CLK2-201ENST00000355560 EHMT1Q9H9B1 1298 aa28.78■■■□□ 2.2
CLK2-201ENST00000355560 SLC38A10Q9HBR0 1119 aa28.78■■■□□ 2.2
CLK2-201ENST00000355560 MSH4O15457 936 aa28.78■■■□□ 2.2
CLK2-201ENST00000355560 PDE4DQ08499 809 aa28.78■■■□□ 2.2
CLK2-201ENST00000355560 TPD52L1Q16890 204 aaPredicted RBP28.78■■■□□ 2.2
CLK2-201ENST00000355560 CDKAL1Q5VV42 579 aa28.78■■■□□ 2.2
CLK2-201ENST00000355560 INTS13Q9NVM9 706 aa28.78■■■□□ 2.2
CLK2-201ENST00000355560 ZHX2Q9Y6X8 837 aa28.78■■■□□ 2.2
CLK2-201ENST00000355560 PITPNM2Q9BZ72 1349 aa28.78■■■□□ 2.2
CLK2-201ENST00000355560 MYMKA6NI61 221 aa28.77■■■□□ 2.2
CLK2-201ENST00000355560 SUPT20HL1Q3ZLR7 823 aa28.77■■■□□ 2.2
CLK2-201ENST00000355560 ADARB2Q9NS39 739 aaKnown RBP28.77■■■□□ 2.2
CLK2-201ENST00000355560 IGLV3-22A0A075B6J6 115 aa28.76■■■□□ 2.2
CLK2-201ENST00000355560 UBXN2AP68543 259 aa28.76■■■□□ 2.2
CLK2-201ENST00000355560 PHIPQ8WWQ0 1821 aa28.76■■■□□ 2.2
CLK2-201ENST00000355560 RAVER2Q9HCJ3 691 aaKnown RBP28.76■■■□□ 2.2
CLK2-201ENST00000355560 PARP14Q460N5 1801 aa28.76■■■□□ 2.19
CLK2-201ENST00000355560 STIM1Q13586 685 aa28.76■■■□□ 2.19
CLK2-201ENST00000355560 HAUS3Q68CZ6 603 aa28.76■■■□□ 2.19
CLK2-201ENST00000355560 POTEB3A0JP26 581 aa28.75■■■□□ 2.19
CLK2-201ENST00000355560 POTECB2RU33 542 aa28.75■■■□□ 2.19
CLK2-201ENST00000355560 NFIBO00712 420 aa28.75■■■□□ 2.19
CLK2-201ENST00000355560 HSD17B4P51659 736 aa28.75■■■□□ 2.19
CLK2-201ENST00000355560 POTEBQ6S5H4 581 aa28.75■■■□□ 2.19
CLK2-201ENST00000355560 VSTM4Q8IW00 320 aa28.75■■■□□ 2.19
CLK2-201ENST00000355560 ALAS1P13196 640 aa28.75■■■□□ 2.19
CLK2-201ENST00000355560 PRKG1Q13976 671 aa28.75■■■□□ 2.19
CLK2-201ENST00000355560 NOLC1Q14978 699 aaKnown RBP eCLIP28.75■■■□□ 2.19
CLK2-201ENST00000355560 NCAPH2Q6IBW4 605 aa28.75■■■□□ 2.19
CLK2-201ENST00000355560 DYMQ7RTS9 669 aa28.75■■■□□ 2.19
CLK2-201ENST00000355560 KIAA1024Q9UPX6 916 aa28.75■■■□□ 2.19
CLK2-201ENST00000355560 HMGCS2P54868 508 aa28.74■■■□□ 2.19
CLK2-201ENST00000355560 CLEC4DQ8WXI8 215 aa28.74■■■□□ 2.19
CLK2-201ENST00000355560 LRRC27Q9C0I9 530 aa28.74■■■□□ 2.19
CLK2-201ENST00000355560 CTDP1Q9Y5B0 961 aaPredicted RBP28.74■■■□□ 2.19
CLK2-201ENST00000355560 PSMA7O14818 248 aa28.73■■■□□ 2.19
CLK2-201ENST00000355560 SLC26A4O43511 780 aa28.73■■■□□ 2.19
CLK2-201ENST00000355560 PTPN21Q16825 1174 aa28.73■■■□□ 2.19
CLK2-201ENST00000355560 ERMNQ8TAM6 284 aa28.73■■■□□ 2.19
CLK2-201ENST00000355560 HOMER2Q9NSB8 354 aa28.73■■■□□ 2.19
CLK2-201ENST00000355560 MED24O75448 989 aa28.73■■■□□ 2.19
CLK2-201ENST00000355560 FCER1AP12319 257 aa28.73■■■□□ 2.19
CLK2-201ENST00000355560 STK4Q13043 487 aa28.73■■■□□ 2.19
CLK2-201ENST00000355560 C9orf131Q5VYM1 1079 aa28.73■■■□□ 2.19
CLK2-201ENST00000355560 CNNM4Q6P4Q7 775 aa28.73■■■□□ 2.19
CLK2-201ENST00000355560 UNC13DQ70J99 1090 aa28.73■■■□□ 2.19
CLK2-201ENST00000355560 VAV3Q9UKW4 847 aa28.73■■■□□ 2.19
CLK2-201ENST00000355560 TRIM49BA6NDI0 452 aa28.72■■■□□ 2.19
CLK2-201ENST00000355560 NOL9Q5SY16 702 aaKnown RBP28.72■■■□□ 2.19
CLK2-201ENST00000355560 APTXQ7Z2E3 356 aaKnown RBP28.72■■■□□ 2.19
CLK2-201ENST00000355560 MCF2L2Q86YR7 1114 aa28.72■■■□□ 2.19
CLK2-201ENST00000355560 CCDC150Q8NCX0 1101 aa28.72■■■□□ 2.19
CLK2-201ENST00000355560 DDX55Q8NHQ9 600 aaKnown RBP eCLIP28.72■■■□□ 2.198e-7■■□□□ 14.4
CLK2-201ENST00000355560 DDX12PQ92771 950 aa28.72■■■□□ 2.19
CLK2-201ENST00000355560 A0A1B0GTH6 734 aa28.72■■■□□ 2.19
CLK2-201ENST00000355560 PVALEFA0A1B0GWK0 134 aa28.72■■■□□ 2.19
CLK2-201ENST00000355560 E9PMD0 336 aa28.72■■■□□ 2.19
CLK2-201ENST00000355560 C12orf42Q96LP6 360 aa28.72■■■□□ 2.19
CLK2-201ENST00000355560 GTPBP4Q9BZE4 634 aaKnown RBP28.72■■■□□ 2.19
CLK2-201ENST00000355560 RBBP6Q7Z6E9 1792 aaKnown RBP28.71■■■□□ 2.19
CLK2-201ENST00000355560 C19orf81C9J6K1 198 aa28.71■■■□□ 2.19
CLK2-201ENST00000355560 ZBED4O75132 1171 aa28.71■■■□□ 2.19
CLK2-201ENST00000355560 PMS1P54277 932 aaKnown RBP28.71■■■□□ 2.19
CLK2-201ENST00000355560 CEP55Q53EZ4 464 aa28.71■■■□□ 2.19
CLK2-201ENST00000355560 ARMCX5Q6P1M9 558 aa28.71■■■□□ 2.19
CLK2-201ENST00000355560 ATG4CQ96DT6 458 aa28.71■■■□□ 2.19
CLK2-201ENST00000355560 COL20A1Q9P218 1284 aa28.71■■■□□ 2.19
CLK2-201ENST00000355560 POTEFA5A3E0 1075 aa28.7■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms