RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 ADSSL1Q8N142 457 aa19.33■□□□□ 0.69
VPS13B-201ENST00000355155 SLC5A5Q92911 643 aa19.33■□□□□ 0.69
VPS13B-201ENST00000355155 DDNO94850 711 aaPredicted RBP19.33■□□□□ 0.69
VPS13B-201ENST00000355155 SETQ01105 290 aaPredicted RBP19.33■□□□□ 0.69
VPS13B-201ENST00000355155 KMT5BQ4FZB7 885 aa19.33■□□□□ 0.69
VPS13B-201ENST00000355155 RPAP3Q9H6T3 665 aaPredicted RBP19.33■□□□□ 0.69
VPS13B-201ENST00000355155 SV2BQ7L1I2 683 aa19.33■□□□□ 0.68
VPS13B-201ENST00000355155 RBM46Q8TBY0 533 aaKnown RBP19.33■□□□□ 0.68
VPS13B-201ENST00000355155 LARP4BQ92615 738 aaKnown RBP19.33■□□□□ 0.68
VPS13B-201ENST00000355155 POLR3CQ9BUI4 534 aaPredicted RBP19.33■□□□□ 0.68
VPS13B-201ENST00000355155 FANCLQ9NW38 375 aa19.33■□□□□ 0.68
VPS13B-201ENST00000355155 SCAF8Q9UPN6 1271 aaKnown RBP19.33■□□□□ 0.68
VPS13B-201ENST00000355155 PTMAP06454 111 aaKnown RBP19.32■□□□□ 0.68
VPS13B-201ENST00000355155 CASP1P29466 404 aa19.32■□□□□ 0.68
VPS13B-201ENST00000355155 DSG3P32926 999 aa19.32■□□□□ 0.68
VPS13B-201ENST00000355155 PPP2R5CQ13362 524 aa19.32■□□□□ 0.68
VPS13B-201ENST00000355155 TKFCQ3LXA3 575 aa19.32■□□□□ 0.68
VPS13B-201ENST00000355155 CCDC174Q6PII3 467 aa19.32■□□□□ 0.68
VPS13B-201ENST00000355155 APTXQ7Z2E3 356 aaKnown RBP19.32■□□□□ 0.68
VPS13B-201ENST00000355155 SNX29Q8TEQ0 813 aa19.32■□□□□ 0.68
VPS13B-201ENST00000355155 BLZF1Q9H2G9 400 aa19.32■□□□□ 0.68
VPS13B-201ENST00000355155 KCNF1Q9H3M0 494 aa19.32■□□□□ 0.68
VPS13B-201ENST00000355155 CCPG1Q9ULG6 757 aa19.32■□□□□ 0.68
VPS13B-201ENST00000355155 SYNRGQ9UMZ2 1314 aa19.32■□□□□ 0.68
VPS13B-201ENST00000355155 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.32■□□□□ 0.68
VPS13B-201ENST00000355155 POTEMA6NI47 508 aa19.32■□□□□ 0.68
VPS13B-201ENST00000355155 LRRC10BA6NIK2 292 aa19.32■□□□□ 0.68
VPS13B-201ENST00000355155 MSH4O15457 936 aa19.32■□□□□ 0.68
VPS13B-201ENST00000355155 ZYXQ15942 572 aaKnown RBP19.32■□□□□ 0.68
VPS13B-201ENST00000355155 C9orf131Q5VYM1 1079 aa19.32■□□□□ 0.68
VPS13B-201ENST00000355155 UNC13DQ70J99 1090 aa19.32■□□□□ 0.68
VPS13B-201ENST00000355155 NFE2L3Q9Y4A8 694 aa19.32■□□□□ 0.68
VPS13B-201ENST00000355155 SNCAIPQ9Y6H5 919 aa19.32■□□□□ 0.68
VPS13B-201ENST00000355155 MEIS1O00470 390 aa19.31■□□□□ 0.68
VPS13B-201ENST00000355155 VWA5AO00534 786 aa19.31■□□□□ 0.68
VPS13B-201ENST00000355155 SPP2Q13103 211 aa19.31■□□□□ 0.68
VPS13B-201ENST00000355155 PSMD2Q13200 908 aa19.31■□□□□ 0.68
VPS13B-201ENST00000355155 HAUS3Q68CZ6 603 aa19.31■□□□□ 0.68
VPS13B-201ENST00000355155 CATSPERGQ6ZRH7 1159 aa19.31■□□□□ 0.68
VPS13B-201ENST00000355155 DHTKD1Q96HY7 919 aaPredicted RBP19.31■□□□□ 0.68
VPS13B-201ENST00000355155 NUDT12Q9BQG2 462 aa19.31■□□□□ 0.68
VPS13B-201ENST00000355155 XPO4Q9C0E2 1151 aaKnown RBP19.31■□□□□ 0.68
VPS13B-201ENST00000355155 ZBED4O75132 1171 aa19.31■□□□□ 0.68
VPS13B-201ENST00000355155 GSDMDP57764 484 aa19.31■□□□□ 0.68
VPS13B-201ENST00000355155 MAP3K9P80192 1104 aa19.31■□□□□ 0.68
VPS13B-201ENST00000355155 PSMD10O75832 226 aa19.3■□□□□ 0.68
VPS13B-201ENST00000355155 RPA1P27694 616 aa19.3■□□□□ 0.68
VPS13B-201ENST00000355155 ECM1Q16610 540 aa19.3■□□□□ 0.68
VPS13B-201ENST00000355155 XRRA1Q6P2D8 792 aa19.3■□□□□ 0.68
VPS13B-201ENST00000355155 ZKSCAN4Q969J2 545 aaPredicted RBP19.3■□□□□ 0.68
VPS13B-201ENST00000355155 CCDC47Q96A33 483 aaKnown RBP19.3■□□□□ 0.68
VPS13B-201ENST00000355155 AGBL1Q96MI9 1066 aa19.3■□□□□ 0.68
VPS13B-201ENST00000355155 KCND1Q9NSA2 647 aa19.3■□□□□ 0.68
VPS13B-201ENST00000355155 HOXA13P31271 388 aaPredicted RBP19.3■□□□□ 0.68
VPS13B-201ENST00000355155 TBC1D5Q92609 795 aa19.3■□□□□ 0.68
VPS13B-201ENST00000355155 IFNKQ9P0W0 207 aa19.3■□□□□ 0.68
VPS13B-201ENST00000355155 FRMD3A2A2Y4 597 aa19.29■□□□□ 0.68
VPS13B-201ENST00000355155 UNCXA6NJT0 531 aa19.29■□□□□ 0.68
VPS13B-201ENST00000355155 MSNP26038 577 aaKnown RBP19.29■□□□□ 0.68
VPS13B-201ENST00000355155 PLCB2Q00722 1185 aa19.29■□□□□ 0.68
VPS13B-201ENST00000355155 PAK1Q13153 545 aa19.29■□□□□ 0.68
VPS13B-201ENST00000355155 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.29■□□□□ 0.68
VPS13B-201ENST00000355155 ERMNQ8TAM6 284 aa19.29■□□□□ 0.68
VPS13B-201ENST00000355155 NOC3LQ8WTT2 800 aaKnown RBP19.29■□□□□ 0.68
VPS13B-201ENST00000355155 A0A1B0GTH6 734 aa19.29■□□□□ 0.68
VPS13B-201ENST00000355155 ATP1A3P13637 1013 aa19.29■□□□□ 0.68
VPS13B-201ENST00000355155 TAL1P17542 331 aaPredicted RBP19.29■□□□□ 0.68
VPS13B-201ENST00000355155 PRR16Q569H4 304 aa19.29■□□□□ 0.68
VPS13B-201ENST00000355155 PCNX4Q63HM2 1172 aa19.29■□□□□ 0.68
VPS13B-201ENST00000355155 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.29■□□□□ 0.68
VPS13B-201ENST00000355155 KRT26Q7Z3Y9 468 aa19.29■□□□□ 0.68
VPS13B-201ENST00000355155 STAMQ92783 540 aa19.29■□□□□ 0.68
VPS13B-201ENST00000355155 DCPSQ96C86 337 aaKnown RBP19.29■□□□□ 0.68
VPS13B-201ENST00000355155 SPTLC3Q9NUV7 552 aa19.29■□□□□ 0.68
VPS13B-201ENST00000355155 LIMA1Q9UHB6 759 aaKnown RBP19.29■□□□□ 0.68
VPS13B-201ENST00000355155 LCTP09848 1927 aa19.29■□□□□ 0.68
VPS13B-201ENST00000355155 MYMKA6NI61 221 aa19.29■□□□□ 0.68
VPS13B-201ENST00000355155 CFBP00751 764 aa19.29■□□□□ 0.68
VPS13B-201ENST00000355155 CCDC144BQ3MJ40 725 aa19.29■□□□□ 0.68
VPS13B-201ENST00000355155 CEP55Q53EZ4 464 aa19.29■□□□□ 0.68
VPS13B-201ENST00000355155 TUFT1Q9NNX1 390 aa19.29■□□□□ 0.68
VPS13B-201ENST00000355155 UBIAD1Q9Y5Z9 338 aa19.29■□□□□ 0.68
VPS13B-201ENST00000355155 PRCPP42785 496 aa19.28■□□□□ 0.68
VPS13B-201ENST00000355155 VSTM4Q8IW00 320 aa19.28■□□□□ 0.68
VPS13B-201ENST00000355155 RASSF8Q8NHQ8 419 aa19.28■□□□□ 0.68
VPS13B-201ENST00000355155 DNAJC19Q96DA6 116 aa19.28■□□□□ 0.68
VPS13B-201ENST00000355155 CDK5RAP3Q96JB5 506 aa19.28■□□□□ 0.68
VPS13B-201ENST00000355155 RIT2Q99578 217 aa19.28■□□□□ 0.68
VPS13B-201ENST00000355155 MXRA8Q9BRK3 442 aa19.28■□□□□ 0.68
VPS13B-201ENST00000355155 INTS13Q9NVM9 706 aa19.28■□□□□ 0.68
VPS13B-201ENST00000355155 FLOT1O75955 427 aa19.28■□□□□ 0.68
VPS13B-201ENST00000355155 SPATA31C1P0DKV0 1188 aa19.28■□□□□ 0.68
VPS13B-201ENST00000355155 KCNJ6P48051 423 aa19.28■□□□□ 0.68
VPS13B-201ENST00000355155 SPAG1Q07617 926 aa19.28■□□□□ 0.68
VPS13B-201ENST00000355155 TBX2Q13207 712 aaPredicted RBP19.28■□□□□ 0.68
VPS13B-201ENST00000355155 NR1I3Q14994 352 aa19.28■□□□□ 0.68
VPS13B-201ENST00000355155 LBX2Q6XYB7 198 aa19.28■□□□□ 0.68
VPS13B-201ENST00000355155 OTOP1Q7RTM1 612 aa19.28■□□□□ 0.68
VPS13B-201ENST00000355155 CCDC186Q7Z3E2 898 aa19.28■□□□□ 0.68
VPS13B-201ENST00000355155 KCNK18Q7Z418 384 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms