RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 SOGA3Q5TF21 947 aa11.98□□□□□ -0.49
SND1-201ENST00000354725 CCDC102BQ68D86 513 aa11.98□□□□□ -0.49
SND1-201ENST00000354725 MLKLQ8NB16 471 aa11.98□□□□□ -0.49
SND1-201ENST00000354725 INO80BQ9C086 356 aaPredicted RBP11.98□□□□□ -0.49
SND1-201ENST00000354725 FAM204AQ9H8W3 233 aa11.98□□□□□ -0.49
SND1-201ENST00000354725 SRPRBQ9Y5M8 271 aaKnown RBP11.98□□□□□ -0.49
SND1-201ENST00000354725 MROH5Q6ZUA9 1318 aa11.97□□□□□ -0.49
SND1-201ENST00000354725 hCG_2014768A0A024R1R8 64 aa11.97□□□□□ -0.49
SND1-201ENST00000354725 GBP2P32456 591 aaPredicted RBP11.97□□□□□ -0.49
SND1-201ENST00000354725 GRIN1Q05586 938 aa11.97□□□□□ -0.49
SND1-201ENST00000354725 CHRNDQ07001 517 aa11.97□□□□□ -0.49
SND1-201ENST00000354725 CUL4BQ13620 913 aa11.97□□□□□ -0.49
SND1-201ENST00000354725 BRD3Q15059 726 aa11.97□□□□□ -0.49
SND1-201ENST00000354725 SLC9C2Q5TAH2 1124 aa11.97□□□□□ -0.49
SND1-201ENST00000354725 CDKAL1Q5VV42 579 aa11.97□□□□□ -0.49
SND1-201ENST00000354725 ARHGAP22Q7Z5H3 698 aa11.97□□□□□ -0.49
SND1-201ENST00000354725 RTKN2Q8IZC4 609 aa11.97□□□□□ -0.49
SND1-201ENST00000354725 TMCO5AQ8N6Q1 288 aa11.97□□□□□ -0.49
SND1-201ENST00000354725 PANX2Q96RD6 677 aa11.97□□□□□ -0.49
SND1-201ENST00000354725 MTRQ99707 1265 aa11.97□□□□□ -0.49
SND1-201ENST00000354725 ZSWIM5Q9P217 1185 aa11.97□□□□□ -0.49
SND1-201ENST00000354725 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.97□□□□□ -0.49
SND1-201ENST00000354725 IVNS1ABPQ9Y6Y0 642 aa11.97□□□□□ -0.49
SND1-201ENST00000354725 ZSCAN12O43309 604 aa11.97□□□□□ -0.49
SND1-201ENST00000354725 ERCC5P28715 1186 aaPredicted RBP11.97□□□□□ -0.49
SND1-201ENST00000354725 GUCY1A2P33402 732 aa11.97□□□□□ -0.49
SND1-201ENST00000354725 VASPP50552 380 aaPredicted RBP11.97□□□□□ -0.49
SND1-201ENST00000354725 RASSF7Q02833 373 aa11.97□□□□□ -0.49
SND1-201ENST00000354725 GNL2Q13823 731 aaKnown RBP11.97□□□□□ -0.49
SND1-201ENST00000354725 POSTNQ15063 836 aa11.97□□□□□ -0.49
SND1-201ENST00000354725 SPECC1LQ69YQ0 1117 aa11.97□□□□□ -0.49
SND1-201ENST00000354725 SMCR8Q8TEV9 937 aaPredicted RBP11.97□□□□□ -0.49
SND1-201ENST00000354725 WDR24Q96S15 920 aa11.97□□□□□ -0.49
SND1-201ENST00000354725 BCS1LQ9Y276 419 aa11.97□□□□□ -0.49
SND1-201ENST00000354725 GSG1L2A8MUP6 293 aa11.96□□□□□ -0.49
SND1-201ENST00000354725 B4E1Z4 1266 aa11.96□□□□□ -0.49
SND1-201ENST00000354725 FUT2Q10981 343 aa11.96□□□□□ -0.49
SND1-201ENST00000354725 SFMBT2Q5VUG0 894 aa11.96□□□□□ -0.49
SND1-201ENST00000354725 SLC30A9Q6PML9 568 aa11.96□□□□□ -0.49
SND1-201ENST00000354725 RAB11FIP4Q86YS3 637 aa11.96□□□□□ -0.49
SND1-201ENST00000354725 SREK1Q8WXA9 508 aaKnown RBP11.96□□□□□ -0.49
SND1-201ENST00000354725 AGBL1Q96MI9 1066 aa11.96□□□□□ -0.49
SND1-201ENST00000354725 XDHP47989 1333 aa11.96□□□□□ -0.49
SND1-201ENST00000354725 KLRK1P26718 216 aa11.96□□□□□ -0.49
SND1-201ENST00000354725 SMARCA1P28370 1054 aa11.96□□□□□ -0.49
SND1-201ENST00000354725 PSMC1P62191 440 aaKnown RBP11.96□□□□□ -0.49
SND1-201ENST00000354725 HSP90B2PQ58FF3 399 aa11.96□□□□□ -0.49
SND1-201ENST00000354725 CAPRIN2Q6IMN6 1127 aaKnown RBP11.96□□□□□ -0.49
SND1-201ENST00000354725 TOGARAM2Q6ZUX3 1019 aa11.96□□□□□ -0.49
SND1-201ENST00000354725 DPH6Q7L8W6 267 aa11.96□□□□□ -0.49
SND1-201ENST00000354725 POM121Q96HA1 1249 aa11.96□□□□□ -0.49
SND1-201ENST00000354725 CCDC114Q96M63 670 aa11.96□□□□□ -0.49
SND1-201ENST00000354725 PHACTR1Q9C0D0 580 aa11.96□□□□□ -0.49
SND1-201ENST00000354725 PCDHGC5Q9Y5F6 944 aa11.96□□□□□ -0.49
SND1-201ENST00000354725 HOXA2O43364 376 aa11.96□□□□□ -0.5
SND1-201ENST00000354725 HIP1RO75146 1068 aa11.96□□□□□ -0.5
SND1-201ENST00000354725 IARSP41252 1262 aaKnown RBP11.96□□□□□ -0.5
SND1-201ENST00000354725 RILPL1Q5EBL4 403 aa11.96□□□□□ -0.5
SND1-201ENST00000354725 IFNL3Q8IZI9 196 aa11.96□□□□□ -0.5
SND1-201ENST00000354725 TNFRSF25Q93038 417 aa11.96□□□□□ -0.5
SND1-201ENST00000354725 SEMA3EO15041 775 aa11.95□□□□□ -0.5
SND1-201ENST00000354725 TIMM44O43615 452 aa11.95□□□□□ -0.5
SND1-201ENST00000354725 URI1O94763 535 aaPredicted RBP11.95□□□□□ -0.5
SND1-201ENST00000354725 SFSWAPQ12872 951 aaKnown RBP11.95□□□□□ -0.5
SND1-201ENST00000354725 RABGGTAQ92696 567 aa11.95□□□□□ -0.5
SND1-201ENST00000354725 TRIM7Q9C029 511 aa11.95□□□□□ -0.5
SND1-201ENST00000354725 RETREG1Q9H6L5 497 aa11.95□□□□□ -0.5
SND1-201ENST00000354725 CNNM2Q9H8M5 875 aa11.95□□□□□ -0.5
SND1-201ENST00000354725 TBC1D7Q9P0N9 293 aa11.95□□□□□ -0.5
SND1-201ENST00000354725 SFMBT1Q9UHJ3 866 aa11.95□□□□□ -0.5
SND1-201ENST00000354725 ZNF804BA4D1E1 1349 aa11.95□□□□□ -0.5
SND1-201ENST00000354725 ITIH6Q6UXX5 1313 aa11.95□□□□□ -0.5
SND1-201ENST00000354725 GRIN3BO60391 1043 aa11.95□□□□□ -0.5
SND1-201ENST00000354725 PHACTR2O75167 634 aa11.95□□□□□ -0.5
SND1-201ENST00000354725 UQCRFS1P1P0C7P4 283 aa11.95□□□□□ -0.5
SND1-201ENST00000354725 TOP1P11387 765 aaKnown RBP11.95□□□□□ -0.5
SND1-201ENST00000354725 PHKA1P46020 1223 aa11.95□□□□□ -0.5
SND1-201ENST00000354725 PLCD1P51178 756 aa11.95□□□□□ -0.5
SND1-201ENST00000354725 SEC23AQ15436 765 aa11.95□□□□□ -0.5
SND1-201ENST00000354725 TXNRD3Q86VQ6 643 aa11.95□□□□□ -0.5
SND1-201ENST00000354725 HNRNPLLQ8WVV9 542 aaKnown RBP11.95□□□□□ -0.5
SND1-201ENST00000354725 FZD9O00144 591 aa11.95□□□□□ -0.5
SND1-201ENST00000354725 OPA1O60313 960 aa11.95□□□□□ -0.5
SND1-201ENST00000354725 FGRP09769 529 aa11.95□□□□□ -0.5
SND1-201ENST00000354725 BEND6Q5SZJ8 279 aaPredicted RBP11.95□□□□□ -0.5
SND1-201ENST00000354725 C9orf131Q5VYM1 1079 aa11.95□□□□□ -0.5
SND1-201ENST00000354725 CRACR2BQ8N4Y2 399 aaPredicted RBP11.95□□□□□ -0.5
SND1-201ENST00000354725 WASF1Q92558 559 aa11.95□□□□□ -0.5
SND1-201ENST00000354725 MPP4Q96JB8 637 aa11.95□□□□□ -0.5
SND1-201ENST00000354725 AATFQ9NY61 560 aaKnown RBP eCLIP11.95□□□□□ -0.5
SND1-201ENST00000354725 FOCADQ5VW36 1801 aa11.95□□□□□ -0.5
SND1-201ENST00000354725 CDK5RAP2Q96SN8 1893 aa11.94□□□□□ -0.5
SND1-201ENST00000354725 A0A087X0B3 334 aa11.94□□□□□ -0.5
SND1-201ENST00000354725 ATP6V1G1O75348 118 aa11.94□□□□□ -0.5
SND1-201ENST00000354725 RPSAP08865 295 aaKnown RBP11.94□□□□□ -0.5
SND1-201ENST00000354725 CDR1P51861 262 aa11.94□□□□□ -0.5
SND1-201ENST00000354725 GOLGA8FQ08AF8 430 aa11.94□□□□□ -0.5
SND1-201ENST00000354725 GOLGA8DPQ0D2H9 430 aa11.94□□□□□ -0.5
SND1-201ENST00000354725 NPY5RQ15761 445 aa11.94□□□□□ -0.5
SND1-201ENST00000354725 MYO1HQ8N1T3 1032 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms