RNA–Protein interactions for RNA: ENST00000344921.10

SMARCB1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2 BASIC

Gene SMARCB1, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-202ENST00000344921 KCNJ14Q9UNX9 436 aa23.81■■□□□ 1.4
SMARCB1-202ENST00000344921 FRMPD4Q14CM0 1322 aa23.81■■□□□ 1.4
SMARCB1-202ENST00000344921 DUSP11O75319 330 aaKnown RBP23.81■■□□□ 1.4
SMARCB1-202ENST00000344921 CAPN2P17655 700 aa23.81■■□□□ 1.4
SMARCB1-202ENST00000344921 CLK2P49760 499 aaKnown RBP23.81■■□□□ 1.4
SMARCB1-202ENST00000344921 HMGN5P82970 282 aaKnown RBP23.81■■□□□ 1.4
SMARCB1-202ENST00000344921 TRIM29Q14134 588 aa23.81■■□□□ 1.4
SMARCB1-202ENST00000344921 PCNX4Q63HM2 1172 aa23.81■■□□□ 1.4
SMARCB1-202ENST00000344921 MCTP2Q6DN12 878 aa23.81■■□□□ 1.4
SMARCB1-202ENST00000344921 FAM177A1Q8N128 213 aaPredicted RBP23.81■■□□□ 1.4
SMARCB1-202ENST00000344921 FAM184AQ8NB25 1140 aa23.81■■□□□ 1.4
SMARCB1-202ENST00000344921 RASGRP4Q8TDF6 673 aa23.81■■□□□ 1.4
SMARCB1-202ENST00000344921 GJB4Q9NTQ9 266 aa23.81■■□□□ 1.4
SMARCB1-202ENST00000344921 RTEL1Q9NZ71 1219 aa23.81■■□□□ 1.4
SMARCB1-202ENST00000344921 ADCY6O43306 1168 aa23.8■■□□□ 1.4
SMARCB1-202ENST00000344921 PGK1P00558 417 aa23.8■■□□□ 1.4
SMARCB1-202ENST00000344921 SMPD1P17405 629 aa23.8■■□□□ 1.4
SMARCB1-202ENST00000344921 TTLL4Q14679 1199 aa23.8■■□□□ 1.4
SMARCB1-202ENST00000344921 ARRDC4Q8NCT1 418 aa23.8■■□□□ 1.4
SMARCB1-202ENST00000344921 SPC25Q9HBM1 224 aa23.8■■□□□ 1.4
SMARCB1-202ENST00000344921 ADAMTS3O15072 1205 aa23.79■■□□□ 1.4
SMARCB1-202ENST00000344921 STAM2O75886 525 aa23.79■■□□□ 1.4
SMARCB1-202ENST00000344921 TXNP10599 105 aaKnown RBP23.79■■□□□ 1.4
SMARCB1-202ENST00000344921 MRPS9P82933 396 aaKnown RBP23.79■■□□□ 1.4
SMARCB1-202ENST00000344921 GALNT17Q6IS24 598 aa23.79■■□□□ 1.4
SMARCB1-202ENST00000344921 BLIDQ8IZY5 108 aa23.79■■□□□ 1.4
SMARCB1-202ENST00000344921 MRVI1Q9Y6F6 885 aa23.79■■□□□ 1.4
SMARCB1-202ENST00000344921 FRMPD3Q5JV73 1810 aa23.79■■□□□ 1.4
SMARCB1-202ENST00000344921 GNPTABQ3T906 1256 aa23.79■■□□□ 1.4
SMARCB1-202ENST00000344921 XRRA1Q6P2D8 792 aa23.79■■□□□ 1.4
SMARCB1-202ENST00000344921 PHF20Q9BVI0 1012 aa23.79■■□□□ 1.4
SMARCB1-202ENST00000344921 KIAA1217Q5T5P2 1943 aa23.78■■□□□ 1.4
SMARCB1-202ENST00000344921 RBM47A0AV96 593 aaKnown RBP23.78■■□□□ 1.4
SMARCB1-202ENST00000344921 C6orf222P0C671 652 aaPredicted RBP23.78■■□□□ 1.4
SMARCB1-202ENST00000344921 DUSP28Q4G0W2 176 aa23.78■■□□□ 1.4
SMARCB1-202ENST00000344921 TMEM63BQ5T3F8 832 aa23.78■■□□□ 1.4
SMARCB1-202ENST00000344921 GJC2Q5T442 439 aaPredicted RBP23.78■■□□□ 1.4
SMARCB1-202ENST00000344921 RNF180Q86T96 592 aa23.78■■□□□ 1.4
SMARCB1-202ENST00000344921 TLK2Q86UE8 772 aa23.78■■□□□ 1.4
SMARCB1-202ENST00000344921 ANKLE1Q8NAG6 615 aa23.78■■□□□ 1.4
SMARCB1-202ENST00000344921 AP5M1Q9H0R1 490 aa23.78■■□□□ 1.4
SMARCB1-202ENST00000344921 DYNC1LI2O43237 492 aaPredicted RBP23.77■■□□□ 1.4
SMARCB1-202ENST00000344921 BRMS1Q9HCU9 246 aa23.77■■□□□ 1.4
SMARCB1-202ENST00000344921 GNEQ9Y223 722 aaKnown RBP23.77■■□□□ 1.4
SMARCB1-202ENST00000344921 SYNRGQ9UMZ2 1314 aa23.77■■□□□ 1.4
SMARCB1-202ENST00000344921 KBTBD13C9JR72 458 aa23.76■■□□□ 1.39
SMARCB1-202ENST00000344921 FARP2O94887 1054 aaPredicted RBP23.76■■□□□ 1.39
SMARCB1-202ENST00000344921 ZNF76P36508 570 aa23.76■■□□□ 1.39
SMARCB1-202ENST00000344921 LY6KQ17RY6 165 aa23.76■■□□□ 1.39
SMARCB1-202ENST00000344921 KCNV1Q6PIU1 500 aa23.76■■□□□ 1.39
SMARCB1-202ENST00000344921 DAGLBQ8NCG7 672 aa23.76■■□□□ 1.39
SMARCB1-202ENST00000344921 NKRFO15226 690 aaKnown RBP eCLIP23.76■■□□□ 1.39
SMARCB1-202ENST00000344921 RGS20O76081 388 aa23.76■■□□□ 1.39
SMARCB1-202ENST00000344921 ARIH2O95376 493 aa23.76■■□□□ 1.39
SMARCB1-202ENST00000344921 PTGS1P23219 599 aa23.76■■□□□ 1.39
SMARCB1-202ENST00000344921 SREBF1P36956 1147 aa23.76■■□□□ 1.39
SMARCB1-202ENST00000344921 LRRC41Q15345 812 aa23.76■■□□□ 1.39
SMARCB1-202ENST00000344921 NLRX1Q86UT6 975 aa23.76■■□□□ 1.39
SMARCB1-202ENST00000344921 C8orf76Q96K31 380 aa23.76■■□□□ 1.39
SMARCB1-202ENST00000344921 KIF3AQ9Y496 699 aa23.76■■□□□ 1.39
SMARCB1-202ENST00000344921 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.76■■□□□ 1.39
SMARCB1-202ENST00000344921 ARHGAP4P98171 946 aa23.75■■□□□ 1.39
SMARCB1-202ENST00000344921 COPS5Q92905 334 aa23.75■■□□□ 1.39
SMARCB1-202ENST00000344921 PAWRQ96IZ0 340 aaKnown RBP23.75■■□□□ 1.39
SMARCB1-202ENST00000344921 INPP4AQ96PE3 977 aaPredicted RBP23.75■■□□□ 1.39
SMARCB1-202ENST00000344921 Q9Y3F1 56 aa23.75■■□□□ 1.39
SMARCB1-202ENST00000344921 DNM1LO00429 736 aa23.74■■□□□ 1.39
SMARCB1-202ENST00000344921 ADAMTS4O75173 837 aa23.74■■□□□ 1.39
SMARCB1-202ENST00000344921 GJA9P57773 515 aa23.74■■□□□ 1.39
SMARCB1-202ENST00000344921 NPY5RQ15761 445 aa23.74■■□□□ 1.39
SMARCB1-202ENST00000344921 GNASQ5JWF2 1037 aa23.74■■□□□ 1.39
SMARCB1-202ENST00000344921 KRT40Q6A162 431 aa23.74■■□□□ 1.39
SMARCB1-202ENST00000344921 CCDC62Q6P9F0 684 aa23.74■■□□□ 1.39
SMARCB1-202ENST00000344921 OR6J1Q8NGC5 347 aa23.74■■□□□ 1.39
SMARCB1-202ENST00000344921 DIS3LQ8TF46 1054 aaKnown RBP23.74■■□□□ 1.39
SMARCB1-202ENST00000344921 DDX41Q9UJV9 622 aaKnown RBP23.74■■□□□ 1.39
SMARCB1-202ENST00000344921 SMC3Q9UQE7 1217 aa23.74■■□□□ 1.39
SMARCB1-202ENST00000344921 TGFB3P10600 412 aa23.73■■□□□ 1.39
SMARCB1-202ENST00000344921 KRT2P35908 639 aa23.73■■□□□ 1.39
SMARCB1-202ENST00000344921 GUCY1B3Q02153 619 aa23.73■■□□□ 1.39
SMARCB1-202ENST00000344921 IFFO2Q5TF58 517 aa23.73■■□□□ 1.39
SMARCB1-202ENST00000344921 CCDC194A0A1B0GVG4 234 aa23.73■■□□□ 1.39
SMARCB1-202ENST00000344921 K7ELQ4 463 aaPredicted RBP23.73■■□□□ 1.39
SMARCB1-202ENST00000344921 FIBPO43427 364 aa23.73■■□□□ 1.39
SMARCB1-202ENST00000344921 MMP1P03956 469 aa23.73■■□□□ 1.39
SMARCB1-202ENST00000344921 IRX5P78411 483 aaPredicted RBP23.73■■□□□ 1.39
SMARCB1-202ENST00000344921 NECAB2Q7Z6G3 386 aa23.73■■□□□ 1.39
SMARCB1-202ENST00000344921 HSCBQ8IWL3 235 aa23.73■■□□□ 1.39
SMARCB1-202ENST00000344921 UPF3AQ9H1J1 476 aaKnown RBP23.73■■□□□ 1.39
SMARCB1-202ENST00000344921 MYADML2A6NDP7 307 aa23.72■■□□□ 1.39
SMARCB1-202ENST00000344921 GH1P01241 217 aa23.72■■□□□ 1.39
SMARCB1-202ENST00000344921 ITGB5P18084 799 aa23.72■■□□□ 1.39
SMARCB1-202ENST00000344921 GJB2P29033 226 aa23.72■■□□□ 1.39
SMARCB1-202ENST00000344921 BEX3Q00994 111 aa23.72■■□□□ 1.39
SMARCB1-202ENST00000344921 MTMR1Q13613 665 aa23.72■■□□□ 1.39
SMARCB1-202ENST00000344921 SAFBQ15424 915 aaKnown RBP eCLIP23.72■■□□□ 1.39
SMARCB1-202ENST00000344921 FSCN1Q16658 493 aaKnown RBP23.72■■□□□ 1.39
SMARCB1-202ENST00000344921 KRT25Q7Z3Z0 450 aa23.72■■□□□ 1.39
SMARCB1-202ENST00000344921 OXER1Q8TDS5 423 aa23.72■■□□□ 1.39
SMARCB1-202ENST00000344921 TBCKQ8TEA7 893 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms