RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 CRACR2BQ8N4Y2 399 aaPredicted RBP8.43□□□□□ -1.06
ZNF540-202ENST00000343599 ADAMTS19Q8TE59 1207 aa8.43□□□□□ -1.06
ZNF540-202ENST00000343599 GRXCR2A6NFK2 248 aa8.42□□□□□ -1.06
ZNF540-202ENST00000343599 Q3C1V9 767 aa8.42□□□□□ -1.06
ZNF540-202ENST00000343599 TAPT1Q6NXT6 567 aa8.42□□□□□ -1.06
ZNF540-202ENST00000343599 NME8Q8N427 588 aa8.42□□□□□ -1.06
ZNF540-202ENST00000343599 CMASQ8NFW8 434 aaPredicted RBP8.42□□□□□ -1.06
ZNF540-202ENST00000343599 OSBPL6Q9BZF3 934 aa8.42□□□□□ -1.06
ZNF540-202ENST00000343599 STARD7Q9NQZ5 370 aa8.42□□□□□ -1.06
ZNF540-202ENST00000343599 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.42□□□□□ -1.06
ZNF540-202ENST00000343599 ZFP37Q9Y6Q3 630 aaPredicted RBP8.42□□□□□ -1.06
ZNF540-202ENST00000343599 ERCC3P19447 782 aa8.42□□□□□ -1.06
ZNF540-202ENST00000343599 COL9A1P20849 921 aa8.42□□□□□ -1.06
ZNF540-202ENST00000343599 CDC42EP1Q00587 391 aa8.42□□□□□ -1.06
ZNF540-202ENST00000343599 TFCP2Q12800 502 aa8.42□□□□□ -1.06
ZNF540-202ENST00000343599 CHAF1AQ13111 956 aaPredicted RBP8.42□□□□□ -1.06
ZNF540-202ENST00000343599 GPATCH4Q5T3I0 446 aaKnown RBP8.42□□□□□ -1.06
ZNF540-202ENST00000343599 SMYD5Q6GMV2 418 aa8.42□□□□□ -1.06
ZNF540-202ENST00000343599 BADQ92934 168 aa8.42□□□□□ -1.06
ZNF540-202ENST00000343599 LRCH3Q96II8 777 aa8.42□□□□□ -1.06
ZNF540-202ENST00000343599 UHRF1Q96T88 793 aaPredicted RBP8.42□□□□□ -1.06
ZNF540-202ENST00000343599 RAD9AQ99638 391 aa8.42□□□□□ -1.06
ZNF540-202ENST00000343599 FTHL17Q9BXU8 183 aa8.42□□□□□ -1.06
ZNF540-202ENST00000343599 MED4Q9NPJ6 270 aa8.42□□□□□ -1.06
ZNF540-202ENST00000343599 HELLSQ9NRZ9 838 aa8.42□□□□□ -1.06
ZNF540-202ENST00000343599 ANKRD62A6NC57 917 aa8.41□□□□□ -1.06
ZNF540-202ENST00000343599 LRP3O75074 770 aa8.41□□□□□ -1.06
ZNF540-202ENST00000343599 TTLL1O95922 423 aa8.41□□□□□ -1.06
ZNF540-202ENST00000343599 TMEM132BQ14DG7 1078 aa8.41□□□□□ -1.06
ZNF540-202ENST00000343599 CAVIN1Q6NZI2 390 aaKnown RBP8.41□□□□□ -1.06
ZNF540-202ENST00000343599 VWCEQ96DN2 955 aa8.41□□□□□ -1.06
ZNF540-202ENST00000343599 PORCNQ9H237 461 aa8.41□□□□□ -1.06
ZNF540-202ENST00000343599 MMP1P03956 469 aa8.41□□□□□ -1.06
ZNF540-202ENST00000343599 TLE2Q04725 743 aa8.41□□□□□ -1.06
ZNF540-202ENST00000343599 DPP9Q86TI2 863 aa8.41□□□□□ -1.06
ZNF540-202ENST00000343599 MNS1Q8NEH6 495 aa8.41□□□□□ -1.06
ZNF540-202ENST00000343599 KCNN1Q92952 543 aa8.41□□□□□ -1.06
ZNF540-202ENST00000343599 GPATCH3Q96I76 525 aa8.41□□□□□ -1.06
ZNF540-202ENST00000343599 NECTIN4Q96NY8 510 aa8.41□□□□□ -1.06
ZNF540-202ENST00000343599 GLT8D2Q9H1C3 349 aa8.41□□□□□ -1.06
ZNF540-202ENST00000343599 LMBRD1Q9NUN5 540 aa8.41□□□□□ -1.06
ZNF540-202ENST00000343599 TMEM39AQ9NV64 488 aa8.41□□□□□ -1.06
ZNF540-202ENST00000343599 H3BNC9 293 aa8.4□□□□□ -1.06
ZNF540-202ENST00000343599 RAG1P15918 1043 aa8.4□□□□□ -1.06
ZNF540-202ENST00000343599 ITGB8P26012 769 aa8.4□□□□□ -1.06
ZNF540-202ENST00000343599 GSCP56915 257 aaPredicted RBP8.4□□□□□ -1.06
ZNF540-202ENST00000343599 SMAD2Q15796 467 aaKnown RBP8.4□□□□□ -1.06
ZNF540-202ENST00000343599 CRIPAKQ8N1N5 446 aa8.4□□□□□ -1.06
ZNF540-202ENST00000343599 RNF217Q8TC41 542 aa8.4□□□□□ -1.06
ZNF540-202ENST00000343599 APPBP2Q92624 585 aa8.4□□□□□ -1.06
ZNF540-202ENST00000343599 PBX4Q9BYU1 374 aa8.4□□□□□ -1.06
ZNF540-202ENST00000343599 WDR81Q562E7 1941 aa8.4□□□□□ -1.06
ZNF540-202ENST00000343599 GOLIM4O00461 696 aa8.4□□□□□ -1.06
ZNF540-202ENST00000343599 SRGAP2BP0DMP2 458 aa8.4□□□□□ -1.06
ZNF540-202ENST00000343599 SLC26A2P50443 739 aa8.4□□□□□ -1.06
ZNF540-202ENST00000343599 TSGA10IPQ3SY00 556 aa8.4□□□□□ -1.06
ZNF540-202ENST00000343599 HLA-CQ95604 372 aa8.4□□□□□ -1.06
ZNF540-202ENST00000343599 TGS1Q96RS0 853 aaKnown RBP8.4□□□□□ -1.06
ZNF540-202ENST00000343599 SENP7Q9BQF6 1050 aa8.4□□□□□ -1.06
ZNF540-202ENST00000343599 ZNF446Q9NWS9 450 aa8.4□□□□□ -1.06
ZNF540-202ENST00000343599 DDX19BQ9UMR2 479 aa8.4□□□□□ -1.06
ZNF540-202ENST00000343599 CCDC189A1A4V9 331 aa8.4□□□□□ -1.07
ZNF540-202ENST00000343599 PIK3CDO00329 1044 aa8.4□□□□□ -1.07
ZNF540-202ENST00000343599 GDF11O95390 407 aa8.4□□□□□ -1.07
ZNF540-202ENST00000343599 PDE6AP16499 860 aa8.4□□□□□ -1.07
ZNF540-202ENST00000343599 DIXDC1Q155Q3 683 aa8.4□□□□□ -1.07
ZNF540-202ENST00000343599 PPP1R18Q6NYC8 613 aa8.4□□□□□ -1.07
ZNF540-202ENST00000343599 TRAF7Q6Q0C0 670 aa8.4□□□□□ -1.07
ZNF540-202ENST00000343599 C16orf59Q7L2K0 433 aa8.4□□□□□ -1.07
ZNF540-202ENST00000343599 DGKHQ86XP1 1220 aa8.4□□□□□ -1.07
ZNF540-202ENST00000343599 PPTC7Q8NI37 304 aa8.4□□□□□ -1.07
ZNF540-202ENST00000343599 EVI5LQ96CN4 794 aa8.4□□□□□ -1.07
ZNF540-202ENST00000343599 TRERF1Q96PN7 1200 aa8.4□□□□□ -1.07
ZNF540-202ENST00000343599 AP5M1Q9H0R1 490 aa8.4□□□□□ -1.07
ZNF540-202ENST00000343599 C1orf112Q9NSG2 853 aa8.4□□□□□ -1.07
ZNF540-202ENST00000343599 DZANK1Q9NVP4 752 aa8.4□□□□□ -1.07
ZNF540-202ENST00000343599 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.4□□□□□ -1.07
ZNF540-202ENST00000343599 LRP2BPQ9P2M1 347 aa8.4□□□□□ -1.07
ZNF540-202ENST00000343599 SALL3Q9BXA9 1300 aa8.39□□□□□ -1.07
ZNF540-202ENST00000343599 SOBPA7XYQ1 873 aa8.39□□□□□ -1.07
ZNF540-202ENST00000343599 PEX14O75381 377 aa8.39□□□□□ -1.07
ZNF540-202ENST00000343599 GNAT1P11488 350 aa8.39□□□□□ -1.07
ZNF540-202ENST00000343599 HSD17B4P51659 736 aa8.39□□□□□ -1.07
ZNF540-202ENST00000343599 PURAQ00577 322 aaKnown RBP8.39□□□□□ -1.07
ZNF540-202ENST00000343599 LAMC2Q13753 1193 aa8.39□□□□□ -1.07
ZNF540-202ENST00000343599 CCDC62Q6P9F0 684 aa8.39□□□□□ -1.07
ZNF540-202ENST00000343599 SCFD2Q8WU76 684 aa8.39□□□□□ -1.07
ZNF540-202ENST00000343599 ZNF689Q96CS4 500 aaPredicted RBP8.39□□□□□ -1.07
ZNF540-202ENST00000343599 LZTS2Q9BRK4 669 aa8.39□□□□□ -1.07
ZNF540-202ENST00000343599 OSBPL3Q9H4L5 887 aa8.39□□□□□ -1.07
ZNF540-202ENST00000343599 GH2P01242 217 aa8.39□□□□□ -1.07
ZNF540-202ENST00000343599 SELPP16109 830 aa8.39□□□□□ -1.07
ZNF540-202ENST00000343599 HOXB8P17481 243 aaPredicted RBP8.39□□□□□ -1.07
ZNF540-202ENST00000343599 PAX3P23760 479 aa8.39□□□□□ -1.07
ZNF540-202ENST00000343599 ICA1Q05084 483 aa8.39□□□□□ -1.07
ZNF540-202ENST00000343599 SEMA3FQ13275 785 aa8.39□□□□□ -1.07
ZNF540-202ENST00000343599 HERC6Q8IVU3 1022 aa8.39□□□□□ -1.07
ZNF540-202ENST00000343599 FAM178BQ8IXR5 827 aa8.39□□□□□ -1.07
ZNF540-202ENST00000343599 LRRC47Q8N1G4 583 aaKnown RBP8.39□□□□□ -1.07
ZNF540-202ENST00000343599 FBXO22Q8NEZ5 403 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms