RNA–Protein interactions for RNA: ENST00000343053.4

NELFB-201, Transcript of negative elongation factor complex member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NELFB, Length 2,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFB-201ENST00000343053 CREG2Q8IUH2 290 aa26.67■■□□□ 1.86
NELFB-201ENST00000343053 DDX12PQ92771 950 aa26.67■■□□□ 1.86
NELFB-201ENST00000343053 CRACR2AQ9BSW2 395 aa26.67■■□□□ 1.86
NELFB-201ENST00000343053 SNX12Q9UMY4 172 aa26.67■■□□□ 1.86
NELFB-201ENST00000343053 PLAGL2Q9UPG8 496 aa26.67■■□□□ 1.86
NELFB-201ENST00000343053 ZC3H4Q9UPT8 1303 aaKnown RBP26.67■■□□□ 1.86
NELFB-201ENST00000343053 EDIL3O43854 480 aa26.67■■□□□ 1.86
NELFB-201ENST00000343053 NAP1L1P55209 391 aaKnown RBP26.67■■□□□ 1.86
NELFB-201ENST00000343053 PPP4CP60510 307 aa26.67■■□□□ 1.86
NELFB-201ENST00000343053 TDRD12Q587J7 1177 aaKnown RBP26.67■■□□□ 1.86
NELFB-201ENST00000343053 FGFBP2Q9BYJ0 223 aa26.67■■□□□ 1.86
NELFB-201ENST00000343053 MED4Q9NPJ6 270 aa26.67■■□□□ 1.86
NELFB-201ENST00000343053 CWC15Q9P013 229 aaKnown RBP26.67■■□□□ 1.86
NELFB-201ENST00000343053 VGLL3A8MV65 326 aa26.66■■□□□ 1.86
NELFB-201ENST00000343053 MYO1CO00159 1063 aa26.66■■□□□ 1.86
NELFB-201ENST00000343053 MFSD14BQ5SR56 506 aa26.66■■□□□ 1.86
NELFB-201ENST00000343053 RSPH14Q9UHP6 348 aa26.66■■□□□ 1.86
NELFB-201ENST00000343053 RAD21O60216 631 aa26.66■■□□□ 1.86
NELFB-201ENST00000343053 TUBBP07437 444 aa26.66■■□□□ 1.86
NELFB-201ENST00000343053 PDHBP11177 359 aa26.66■■□□□ 1.86
NELFB-201ENST00000343053 RASSF7Q02833 373 aa26.66■■□□□ 1.86
NELFB-201ENST00000343053 AFAP1L1Q8TED9 768 aa26.66■■□□□ 1.86
NELFB-201ENST00000343053 CD209Q9NNX6 404 aa26.66■■□□□ 1.86
NELFB-201ENST00000343053 USO1O60763 962 aaKnown RBP26.65■■□□□ 1.86
NELFB-201ENST00000343053 TACC1O75410 805 aa26.65■■□□□ 1.86
NELFB-201ENST00000343053 LDHCP07864 332 aa26.65■■□□□ 1.86
NELFB-201ENST00000343053 BARGINQ6ZT62 677 aa26.65■■□□□ 1.86
NELFB-201ENST00000343053 UNC13DQ70J99 1090 aa26.65■■□□□ 1.86
NELFB-201ENST00000343053 GOLGA6L1Q8N7Z2 621 aa26.65■■□□□ 1.86
NELFB-201ENST00000343053 MTMR9Q96QG7 549 aa26.65■■□□□ 1.86
NELFB-201ENST00000343053 RRP15Q9Y3B9 282 aaKnown RBP26.65■■□□□ 1.86
NELFB-201ENST00000343053 ANO9A1A5B4 782 aa26.65■■□□□ 1.86
NELFB-201ENST00000343053 SLC16A2P36021 539 aa26.65■■□□□ 1.86
NELFB-201ENST00000343053 SLC1A4P43007 532 aa26.65■■□□□ 1.86
NELFB-201ENST00000343053 ARID5AQ03989 594 aa26.65■■□□□ 1.86
NELFB-201ENST00000343053 MAN2A1Q16706 1144 aa26.65■■□□□ 1.86
NELFB-201ENST00000343053 LRRC31Q6UY01 552 aa26.65■■□□□ 1.86
NELFB-201ENST00000343053 CCNI2Q6ZMN8 369 aaPredicted RBP26.65■■□□□ 1.86
NELFB-201ENST00000343053 SND1Q7KZF4 910 aaKnown RBP eCLIP26.65■■□□□ 1.86
NELFB-201ENST00000343053 CACNA2D4Q7Z3S7 1137 aa26.65■■□□□ 1.86
NELFB-201ENST00000343053 NELFCDQ8IXH7 590 aa26.65■■□□□ 1.86
NELFB-201ENST00000343053 ADCY7P51828 1080 aa26.64■■□□□ 1.86
NELFB-201ENST00000343053 CNBD1Q8NA66 436 aa26.64■■□□□ 1.86
NELFB-201ENST00000343053 TRIM58Q8NG06 486 aa26.64■■□□□ 1.86
NELFB-201ENST00000343053 ZNF287Q9HBT7 754 aa26.64■■□□□ 1.86
NELFB-201ENST00000343053 A0A1W2PQJ5 194 aa26.64■■□□□ 1.86
NELFB-201ENST00000343053 PRPF6O94906 941 aaKnown RBP26.64■■□□□ 1.86
NELFB-201ENST00000343053 RFC4P35249 363 aa26.64■■□□□ 1.86
NELFB-201ENST00000343053 TMEM266Q2M3C6 531 aa26.64■■□□□ 1.86
NELFB-201ENST00000343053 MS4A14Q96JA4 679 aa26.64■■□□□ 1.86
NELFB-201ENST00000343053 LEMD3Q9Y2U8 911 aa26.64■■□□□ 1.86
NELFB-201ENST00000343053 KCTD19Q17RG1 926 aaPredicted RBP26.63■■□□□ 1.85
NELFB-201ENST00000343053 TTBK2Q6IQ55 1244 aa26.63■■□□□ 1.85
NELFB-201ENST00000343053 OSBPL9Q96SU4 736 aa26.63■■□□□ 1.85
NELFB-201ENST00000343053 JRKLQ9Y4A0 524 aa26.63■■□□□ 1.85
NELFB-201ENST00000343053 AGPSO00116 658 aa26.63■■□□□ 1.85
NELFB-201ENST00000343053 RHBDL3P58872 404 aa26.63■■□□□ 1.85
NELFB-201ENST00000343053 ZNF662Q6ZS27 426 aa26.63■■□□□ 1.85
NELFB-201ENST00000343053 LRRC55Q6ZSA7 311 aa26.63■■□□□ 1.85
NELFB-201ENST00000343053 SRLQ86TD4 932 aa26.63■■□□□ 1.85
NELFB-201ENST00000343053 MSL3Q8N5Y2 521 aaKnown RBP26.63■■□□□ 1.85
NELFB-201ENST00000343053 RAD54LQ92698 747 aa26.63■■□□□ 1.85
NELFB-201ENST00000343053 MTMR8Q96EF0 704 aa26.63■■□□□ 1.85
NELFB-201ENST00000343053 COL24A1Q17RW2 1714 aa26.63■■□□□ 1.85
NELFB-201ENST00000343053 TARSL2A2RTX5 802 aaKnown RBP26.62■■□□□ 1.85
NELFB-201ENST00000343053 MARCH6O60337 910 aa26.62■■□□□ 1.85
NELFB-201ENST00000343053 AKR1B1P15121 316 aa26.62■■□□□ 1.85
NELFB-201ENST00000343053 MAGEA1P43355 309 aa26.62■■□□□ 1.85
NELFB-201ENST00000343053 CCDC181Q5TID7 509 aa26.62■■□□□ 1.85
NELFB-201ENST00000343053 DPP8Q6V1X1 898 aaPredicted RBP26.62■■□□□ 1.85
NELFB-201ENST00000343053 TSGA10Q9BZW7 698 aa26.62■■□□□ 1.85
NELFB-201ENST00000343053 NPHP3-ACAD11A0A0J9YXS1 232 aa26.62■■□□□ 1.85
NELFB-201ENST00000343053 FIGNQ5HY92 759 aa26.62■■□□□ 1.85
NELFB-201ENST00000343053 SPATA4Q8NEY3 305 aa26.62■■□□□ 1.85
NELFB-201ENST00000343053 C8orf37Q96NL8 207 aa26.62■■□□□ 1.85
NELFB-201ENST00000343053 DNAJC21Q5F1R6 531 aaKnown RBP26.62■■□□□ 1.85
NELFB-201ENST00000343053 KRT79Q5XKE5 535 aa26.62■■□□□ 1.85
NELFB-201ENST00000343053 BAP1Q92560 729 aa26.62■■□□□ 1.85
NELFB-201ENST00000343053 RPGRIP1Q96KN7 1286 aa26.62■■□□□ 1.85
NELFB-201ENST00000343053 GPR75-ASB3A0A0A6YYF3 556 aa26.61■■□□□ 1.85
NELFB-201ENST00000343053 AARSP49588 968 aaKnown RBP eCLIP26.61■■□□□ 1.853e-6■■■□□ 16.5
NELFB-201ENST00000343053 TTC19Q6DKK2 380 aaPredicted RBP26.61■■□□□ 1.85
NELFB-201ENST00000343053 VIPAS39Q9H9C1 493 aa26.61■■□□□ 1.85
NELFB-201ENST00000343053 TRAF5O00463 557 aa26.61■■□□□ 1.85
NELFB-201ENST00000343053 MCM3P25205 808 aa26.61■■□□□ 1.85
NELFB-201ENST00000343053 RNASE9P60153 205 aaKnown RBP26.61■■□□□ 1.85
NELFB-201ENST00000343053 CCDC40Q4G0X9 1142 aa26.61■■□□□ 1.85
NELFB-201ENST00000343053 RPGRQ92834 1020 aaKnown RBP26.61■■□□□ 1.85
NELFB-201ENST00000343053 POLD4Q9HCU8 107 aa26.61■■□□□ 1.85
NELFB-201ENST00000343053 GOLGA6BA6NDN3 693 aa26.6■■□□□ 1.85
NELFB-201ENST00000343053 PPP1R11O60927 126 aaPredicted RBP26.6■■□□□ 1.85
NELFB-201ENST00000343053 FNBP4Q8N3X1 1017 aaPredicted RBP26.6■■□□□ 1.85
NELFB-201ENST00000343053 EHD4Q9H223 541 aa26.6■■□□□ 1.85
NELFB-201ENST00000343053 PACSIN2Q9UNF0 486 aaPredicted RBP26.6■■□□□ 1.85
NELFB-201ENST00000343053 AHDC1Q5TGY3 1603 aaPredicted RBP26.6■■□□□ 1.85
NELFB-201ENST00000343053 CDK17Q00537 523 aa26.6■■□□□ 1.85
NELFB-201ENST00000343053 KCNMA1Q12791 1236 aa26.6■■□□□ 1.85
NELFB-201ENST00000343053 PTPROQ16827 1216 aa26.6■■□□□ 1.85
NELFB-201ENST00000343053 GUF1Q8N442 669 aaKnown RBP26.6■■□□□ 1.85
NELFB-201ENST00000343053 ZHX3Q9H4I2 956 aa26.6■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms