RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 TNFAIP2Q03169 654 aa15.11■□□□□ 0.01
TUBD1-202ENST00000340993 NR5A1Q13285 461 aa15.11■□□□□ 0.01
TUBD1-202ENST00000340993 TRIM29Q14134 588 aa15.11■□□□□ 0.01
TUBD1-202ENST00000340993 LHX8Q68G74 356 aa15.11■□□□□ 0.01
TUBD1-202ENST00000340993 MSL3Q8N5Y2 521 aaKnown RBP15.11■□□□□ 0.01
TUBD1-202ENST00000340993 WASF1Q92558 559 aa15.11■□□□□ 0.01
TUBD1-202ENST00000340993 C8orf76Q96K31 380 aa15.11■□□□□ 0.01
TUBD1-202ENST00000340993 XPNPEP3Q9NQH7 507 aa15.11■□□□□ 0.01
TUBD1-202ENST00000340993 PCDHA4Q9UN74 947 aa15.11■□□□□ 0.01
TUBD1-202ENST00000340993 FAM205CA6NFA0 338 aa15.1■□□□□ 0.01
TUBD1-202ENST00000340993 B4DLN1 442 aa15.1■□□□□ 0.01
TUBD1-202ENST00000340993 K7ELQ4 463 aaPredicted RBP15.1■□□□□ 0.01
TUBD1-202ENST00000340993 SGPL1O95470 568 aa15.1■□□□□ 0.01
TUBD1-202ENST00000340993 XBP1P17861 261 aa15.1■□□□□ 0.01
TUBD1-202ENST00000340993 CLK2P49760 499 aaKnown RBP15.1■□□□□ 0.01
TUBD1-202ENST00000340993 GHRHRQ02643 423 aa15.1■□□□□ 0.01
TUBD1-202ENST00000340993 NPY5RQ15761 445 aa15.1■□□□□ 0.01
TUBD1-202ENST00000340993 KRT40Q6A162 431 aa15.1■□□□□ 0.01
TUBD1-202ENST00000340993 BLIDQ8IZY5 108 aa15.1■□□□□ 0.01
TUBD1-202ENST00000340993 CYP2W1Q8TAV3 490 aa15.1■□□□□ 0.01
TUBD1-202ENST00000340993 PHF20Q9BVI0 1012 aa15.1■□□□□ 0.01
TUBD1-202ENST00000340993 VTA1Q9NP79 307 aa15.1■□□□□ 0.01
TUBD1-202ENST00000340993 PCDH10Q9P2E7 1040 aa15.1■□□□□ 0.01
TUBD1-202ENST00000340993 SMC3Q9UQE7 1217 aa15.1■□□□□ 0.01
TUBD1-202ENST00000340993 MRVI1Q9Y6F6 885 aa15.1■□□□□ 0.01
TUBD1-202ENST00000340993 DYNC1LI2O43237 492 aaPredicted RBP15.09■□□□□ 0.01
TUBD1-202ENST00000340993 RGS20O76081 388 aa15.09■□□□□ 0.01
TUBD1-202ENST00000340993 C6orf222P0C671 652 aaPredicted RBP15.09■□□□□ 0.01
TUBD1-202ENST00000340993 TXNP10599 105 aaKnown RBP15.09■□□□□ 0.01
TUBD1-202ENST00000340993 ZNF76P36508 570 aa15.09■□□□□ 0.01
TUBD1-202ENST00000340993 GJA8P48165 433 aa15.09■□□□□ 0.01
TUBD1-202ENST00000340993 CHMP4BP1P59074 171 aa15.09■□□□□ 0.01
TUBD1-202ENST00000340993 TLK2Q86UE8 772 aa15.09■□□□□ 0.01
TUBD1-202ENST00000340993 VSIG10LQ86VR7 867 aa15.09■□□□□ 0.01
TUBD1-202ENST00000340993 BICD2Q8TD16 824 aa15.09■□□□□ 0.01
TUBD1-202ENST00000340993 MORC4Q8TE76 937 aa15.09■□□□□ 0.01
TUBD1-202ENST00000340993 PPP1R13LQ8WUF5 828 aa15.09■□□□□ 0.01
TUBD1-202ENST00000340993 FERMT2Q96AC1 680 aa15.09■□□□□ 0.01
TUBD1-202ENST00000340993 IWS1Q96ST2 819 aa15.09■□□□□ 0.01
TUBD1-202ENST00000340993 LLPHQ9BRT6 129 aaKnown RBP15.09■□□□□ 0.01
TUBD1-202ENST00000340993 BCAS3Q9H6U6 928 aa15.09■□□□□ 0.01
TUBD1-202ENST00000340993 SH3GLB2Q9NR46 395 aa15.09■□□□□ 0.01
TUBD1-202ENST00000340993 MAP3K20Q9NYL2 800 aaKnown RBP15.09■□□□□ 0.01
TUBD1-202ENST00000340993 SYNRGQ9UMZ2 1314 aa15.09■□□□□ 0.01
TUBD1-202ENST00000340993 ESYT2A0FGR8 921 aa15.08■□□□□ 0.01
TUBD1-202ENST00000340993 EARS2Q5JPH6 523 aaKnown RBP15.08■□□□□ 0.01
TUBD1-202ENST00000340993 PIK3AP1Q6ZUJ8 805 aa15.08■□□□□ 0.01
TUBD1-202ENST00000340993 EHMT1Q9H9B1 1298 aa15.08■□□□□ 0.01
TUBD1-202ENST00000340993 TNRC18O15417 2968 aaPredicted RBP15.08■□□□□ 0
TUBD1-202ENST00000340993 BTBD18B2RXH4 712 aa15.08■□□□□ 0
TUBD1-202ENST00000340993 EIF3JO75822 258 aaKnown RBP15.08■□□□□ 0
TUBD1-202ENST00000340993 ATP2B1P20020 1258 aa15.08■□□□□ 0
TUBD1-202ENST00000340993 KRT2P35908 639 aa15.08■□□□□ 0
TUBD1-202ENST00000340993 HMGN5P82970 282 aaKnown RBP15.08■□□□□ 0
TUBD1-202ENST00000340993 ARHGAP4P98171 946 aa15.08■□□□□ 0
TUBD1-202ENST00000340993 INF2Q27J81 1249 aa15.08■□□□□ 0
TUBD1-202ENST00000340993 OR6J1Q8NGC5 347 aa15.08■□□□□ 0
TUBD1-202ENST00000340993 FRMPD4Q14CM0 1322 aa15.08■□□□□ 0
TUBD1-202ENST00000340993 HSP90AA1P07900 732 aaKnown RBP15.07■□□□□ 0
TUBD1-202ENST00000340993 ITGB5P18084 799 aa15.07■□□□□ 0
TUBD1-202ENST00000340993 SP2Q02086 613 aa15.07■□□□□ 0
TUBD1-202ENST00000340993 AP3B2Q13367 1082 aa15.07■□□□□ 0
TUBD1-202ENST00000340993 TTLL4Q14679 1199 aa15.07■□□□□ 0
TUBD1-202ENST00000340993 PCNX4Q63HM2 1172 aa15.07■□□□□ 0
TUBD1-202ENST00000340993 MCTP1Q6DN14 999 aa15.07■□□□□ 0
TUBD1-202ENST00000340993 DIS3L2Q8IYB7 885 aaKnown RBP15.07■□□□□ 0
TUBD1-202ENST00000340993 SAMD3Q8N6K7 520 aa15.07■□□□□ 0
TUBD1-202ENST00000340993 TBCKQ8TEA7 893 aa15.07■□□□□ 0
TUBD1-202ENST00000340993 SCFD2Q8WU76 684 aa15.07■□□□□ 0
TUBD1-202ENST00000340993 GJA10Q969M2 543 aa15.07■□□□□ 0
TUBD1-202ENST00000340993 GLT8D2Q9H1C3 349 aa15.07■□□□□ 0
TUBD1-202ENST00000340993 TELO2Q9Y4R8 837 aa15.07■□□□□ 0
TUBD1-202ENST00000340993 CCDC194A0A1B0GVG4 234 aa15.06■□□□□ 0
TUBD1-202ENST00000340993 DDX39AO00148 427 aaKnown RBP15.06■□□□□ 0
TUBD1-202ENST00000340993 FARP2O94887 1054 aaPredicted RBP15.06■□□□□ 0
TUBD1-202ENST00000340993 MMP1P03956 469 aa15.06■□□□□ 0
TUBD1-202ENST00000340993 SEMA3FQ13275 785 aa15.06■□□□□ 0
TUBD1-202ENST00000340993 GNL2Q13823 731 aaKnown RBP15.06■□□□□ 0
TUBD1-202ENST00000340993 LRRC41Q15345 812 aa15.06■□□□□ 0
TUBD1-202ENST00000340993 PAWRQ96IZ0 340 aaKnown RBP15.06■□□□□ 0
TUBD1-202ENST00000340993 AP5M1Q9H0R1 490 aa15.06■□□□□ 0
TUBD1-202ENST00000340993 BRMS1Q9HCU9 246 aa15.06■□□□□ 0
TUBD1-202ENST00000340993 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.06■□□□□ 0
TUBD1-202ENST00000340993 FAM86B1E9PN63 330 aa15.06■□□□□ 0
TUBD1-202ENST00000340993 FOSP01100 380 aaPredicted RBP15.06■□□□□ 0
TUBD1-202ENST00000340993 FAM86B2P0C5J1 330 aa15.06■□□□□ 0
TUBD1-202ENST00000340993 UBA1P22314 1058 aaKnown RBP15.06■□□□□ 0
TUBD1-202ENST00000340993 SREBF1P36956 1147 aa15.06■□□□□ 0
TUBD1-202ENST00000340993 ATN1P54259 1190 aaPredicted RBP15.06■□□□□ 0
TUBD1-202ENST00000340993 PRR16Q569H4 304 aa15.06■□□□□ 0
TUBD1-202ENST00000340993 GNASQ5JWF2 1037 aa15.06■□□□□ 0
TUBD1-202ENST00000340993 NRBP1Q9UHY1 535 aa15.06■□□□□ 0
TUBD1-202ENST00000340993 GNEQ9Y223 722 aaKnown RBP15.06■□□□□ 0
TUBD1-202ENST00000340993 H3BQV1 296 aa15.05■□□□□ -0
TUBD1-202ENST00000340993 M0R2N6 131 aa15.05■□□□□ -0
TUBD1-202ENST00000340993 MSCO60682 206 aa15.05■□□□□ -0
TUBD1-202ENST00000340993 DUSP11O75319 330 aaKnown RBP15.05■□□□□ -0
TUBD1-202ENST00000340993 TDP2O95551 362 aa15.05■□□□□ -0
TUBD1-202ENST00000340993 GGPS1O95749 300 aa15.05■□□□□ -0
TUBD1-202ENST00000340993 ARP10275 920 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms