RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 PIK3CDO00329 1044 aa15.39■□□□□ 0.05
SIRPB3P-201ENST00000340424 STAM2O75886 525 aa15.39■□□□□ 0.05
SIRPB3P-201ENST00000340424 TMTC3Q6ZXV5 915 aa15.39■□□□□ 0.05
SIRPB3P-201ENST00000340424 SH3RF1Q7Z6J0 888 aa15.39■□□□□ 0.05
SIRPB3P-201ENST00000340424 MICU3Q86XE3 530 aa15.39■□□□□ 0.05
SIRPB3P-201ENST00000340424 FAM126BQ8IXS8 530 aa15.39■□□□□ 0.05
SIRPB3P-201ENST00000340424 SRBD1Q8N5C6 995 aaKnown RBP15.39■□□□□ 0.05
SIRPB3P-201ENST00000340424 BADQ92934 168 aa15.39■□□□□ 0.05
SIRPB3P-201ENST00000340424 CUL5Q93034 780 aa15.39■□□□□ 0.05
SIRPB3P-201ENST00000340424 EMID1Q96A84 441 aaPredicted RBP15.39■□□□□ 0.05
SIRPB3P-201ENST00000340424 MTG1Q9BT17 334 aaPredicted RBP15.39■□□□□ 0.05
SIRPB3P-201ENST00000340424 LRRC2Q9BYS8 371 aa15.39■□□□□ 0.05
SIRPB3P-201ENST00000340424 TBX21Q9UL17 535 aa15.39■□□□□ 0.05
SIRPB3P-201ENST00000340424 BAZ2BQ9UIF8 2168 aaKnown RBP15.39■□□□□ 0.05
SIRPB3P-201ENST00000340424 FRMPD4Q14CM0 1322 aa15.39■□□□□ 0.05
SIRPB3P-201ENST00000340424 ZBTB43O43298 467 aa15.38■□□□□ 0.05
SIRPB3P-201ENST00000340424 PLEKHA8P1O95397 391 aa15.38■□□□□ 0.05
SIRPB3P-201ENST00000340424 TIMP1P01033 207 aa15.38■□□□□ 0.05
SIRPB3P-201ENST00000340424 GH1P01241 217 aa15.38■□□□□ 0.05
SIRPB3P-201ENST00000340424 TGFB3P10600 412 aa15.38■□□□□ 0.05
SIRPB3P-201ENST00000340424 PSMA5P28066 241 aa15.38■□□□□ 0.05
SIRPB3P-201ENST00000340424 CCND2P30279 289 aa15.38■□□□□ 0.05
SIRPB3P-201ENST00000340424 HOXA13P31271 388 aaPredicted RBP15.38■□□□□ 0.05
SIRPB3P-201ENST00000340424 FGD1P98174 961 aa15.38■□□□□ 0.05
SIRPB3P-201ENST00000340424 PURAQ00577 322 aaKnown RBP15.38■□□□□ 0.05
SIRPB3P-201ENST00000340424 COL9A3Q14050 684 aaPredicted RBP15.38■□□□□ 0.05
SIRPB3P-201ENST00000340424 PGM5Q15124 567 aa15.38■□□□□ 0.05
SIRPB3P-201ENST00000340424 ADCK5Q3MIX3 580 aa15.38■□□□□ 0.05
SIRPB3P-201ENST00000340424 TMEM63BQ5T3F8 832 aa15.38■□□□□ 0.05
SIRPB3P-201ENST00000340424 SEPT14Q6ZU15 432 aa15.38■□□□□ 0.05
SIRPB3P-201ENST00000340424 VSIG10LQ86VR7 867 aa15.38■□□□□ 0.05
SIRPB3P-201ENST00000340424 FBXL16Q8N461 479 aa15.38■□□□□ 0.05
SIRPB3P-201ENST00000340424 MRVI1Q9Y6F6 885 aa15.38■□□□□ 0.05
SIRPB3P-201ENST00000340424 hCG_1984214I3L0E3 225 aa15.37■□□□□ 0.05
SIRPB3P-201ENST00000340424 ARIH2O95376 493 aa15.37■□□□□ 0.05
SIRPB3P-201ENST00000340424 CD4P01730 458 aa15.37■□□□□ 0.05
SIRPB3P-201ENST00000340424 SUPT20HL2P0C7V6 817 aa15.37■□□□□ 0.05
SIRPB3P-201ENST00000340424 RXRAP19793 462 aa15.37■□□□□ 0.05
SIRPB3P-201ENST00000340424 FPGSQ05932 587 aa15.37■□□□□ 0.05
SIRPB3P-201ENST00000340424 LAMC2Q13753 1193 aa15.37■□□□□ 0.05
SIRPB3P-201ENST00000340424 RTN1Q16799 776 aa15.37■□□□□ 0.05
SIRPB3P-201ENST00000340424 GNPTABQ3T906 1256 aa15.37■□□□□ 0.05
SIRPB3P-201ENST00000340424 XRRA1Q6P2D8 792 aa15.37■□□□□ 0.05
SIRPB3P-201ENST00000340424 BLOC1S2Q6QNY1 142 aa15.37■□□□□ 0.05
SIRPB3P-201ENST00000340424 ZNF713Q8N859 430 aaPredicted RBP15.37■□□□□ 0.05
SIRPB3P-201ENST00000340424 DDX41Q9UJV9 622 aaKnown RBP15.37■□□□□ 0.05
SIRPB3P-201ENST00000340424 LAMA2P24043 3122 aaKnown RBP15.37■□□□□ 0.05
SIRPB3P-201ENST00000340424 CCDC196A0A1B0GTZ2 297 aa15.36■□□□□ 0.05
SIRPB3P-201ENST00000340424 MYL3P08590 195 aa15.36■□□□□ 0.05
SIRPB3P-201ENST00000340424 MYCLP12524 364 aaPredicted RBP15.36■□□□□ 0.05
SIRPB3P-201ENST00000340424 PTGS1P23219 599 aa15.36■□□□□ 0.05
SIRPB3P-201ENST00000340424 PTPN11Q06124 597 aaPredicted RBP15.36■□□□□ 0.05
SIRPB3P-201ENST00000340424 ARHGAP1Q07960 439 aa15.36■□□□□ 0.05
SIRPB3P-201ENST00000340424 LY6KQ17RY6 165 aa15.36■□□□□ 0.05
SIRPB3P-201ENST00000340424 MFSD5Q6N075 450 aa15.36■□□□□ 0.05
SIRPB3P-201ENST00000340424 NFRKBQ6P4R8 1299 aa15.36■□□□□ 0.05
SIRPB3P-201ENST00000340424 FCHSD1Q86WN1 690 aa15.36■□□□□ 0.05
SIRPB3P-201ENST00000340424 SMARCC2Q8TAQ2 1214 aa15.36■□□□□ 0.05
SIRPB3P-201ENST00000340424 PIBF1Q8WXW3 757 aa15.36■□□□□ 0.05
SIRPB3P-201ENST00000340424 JAKMIP1Q96N16 626 aaKnown RBP15.36■□□□□ 0.05
SIRPB3P-201ENST00000340424 SNX14Q9Y5W7 946 aa15.36■□□□□ 0.05
SIRPB3P-201ENST00000340424 SCN10AQ9Y5Y9 1956 aa15.35■□□□□ 0.05
SIRPB3P-201ENST00000340424 KLF18A0A0U1RQI7 1052 aa15.35■□□□□ 0.05
SIRPB3P-201ENST00000340424 EIF5BO60841 1220 aaKnown RBP15.35■□□□□ 0.05
SIRPB3P-201ENST00000340424 MMP3P08254 477 aa15.35■□□□□ 0.05
SIRPB3P-201ENST00000340424 CASTP20810 708 aaKnown RBP15.35■□□□□ 0.05
SIRPB3P-201ENST00000340424 PPIGQ13427 754 aaKnown RBP eCLIP15.35■□□□□ 0.05
SIRPB3P-201ENST00000340424 DGKDQ16760 1214 aa15.35■□□□□ 0.05
SIRPB3P-201ENST00000340424 PPP1R18Q6NYC8 613 aa15.35■□□□□ 0.05
SIRPB3P-201ENST00000340424 TMEM199Q8N511 208 aa15.35■□□□□ 0.05
SIRPB3P-201ENST00000340424 PPTC7Q8NI37 304 aa15.35■□□□□ 0.05
SIRPB3P-201ENST00000340424 COPS5Q92905 334 aa15.35■□□□□ 0.05
SIRPB3P-201ENST00000340424 KATNAL1Q9BW62 490 aa15.35■□□□□ 0.05
SIRPB3P-201ENST00000340424 ALDH8A1Q9H2A2 487 aaPredicted RBP15.35■□□□□ 0.05
SIRPB3P-201ENST00000340424 PSTPIP2Q9H939 334 aa15.35■□□□□ 0.05
SIRPB3P-201ENST00000340424 TSHZ2Q9NRE2 1034 aa15.35■□□□□ 0.05
SIRPB3P-201ENST00000340424 PCDH10Q9P2E7 1040 aa15.35■□□□□ 0.05
SIRPB3P-201ENST00000340424 GRIN2DO15399 1336 aa15.35■□□□□ 0.05
SIRPB3P-201ENST00000340424 NID2Q14112 1375 aa15.35■□□□□ 0.05
SIRPB3P-201ENST00000340424 GOLGA8AA7E2F4 631 aa15.34■□□□□ 0.05
SIRPB3P-201ENST00000340424 GOLGA8BA8MQT2 603 aa15.34■□□□□ 0.05
SIRPB3P-201ENST00000340424 SOX1O00570 391 aaPredicted RBP15.34■□□□□ 0.05
SIRPB3P-201ENST00000340424 MEIS2O14770 477 aa15.34■□□□□ 0.05
SIRPB3P-201ENST00000340424 RGS20O76081 388 aa15.34■□□□□ 0.05
SIRPB3P-201ENST00000340424 CHRM1P11229 460 aaPredicted RBP15.34■□□□□ 0.05
SIRPB3P-201ENST00000340424 RPS6KB1P23443 525 aa15.34■□□□□ 0.05
SIRPB3P-201ENST00000340424 ITGB8P26012 769 aa15.34■□□□□ 0.05
SIRPB3P-201ENST00000340424 PSMC6P62333 389 aa15.34■□□□□ 0.05
SIRPB3P-201ENST00000340424 PCNX4Q63HM2 1172 aa15.34■□□□□ 0.05
SIRPB3P-201ENST00000340424 DHX37Q8IY37 1157 aaKnown RBP15.34■□□□□ 0.05
SIRPB3P-201ENST00000340424 CMTR1Q8N1G2 835 aaKnown RBP15.34■□□□□ 0.05
SIRPB3P-201ENST00000340424 AFG1LQ8WV93 481 aa15.34■□□□□ 0.05
SIRPB3P-201ENST00000340424 TCEANC2Q96MN5 208 aa15.34■□□□□ 0.05
SIRPB3P-201ENST00000340424 GLT8D2Q9H1C3 349 aa15.34■□□□□ 0.05
SIRPB3P-201ENST00000340424 BRPF3Q9ULD4 1205 aa15.34■□□□□ 0.05
SIRPB3P-201ENST00000340424 CNTNAP5Q8WYK1 1306 aa15.34■□□□□ 0.05
SIRPB3P-201ENST00000340424 B4GALT4O60513 344 aa15.33■□□□□ 0.04
SIRPB3P-201ENST00000340424 HOXD8P13378 290 aaPredicted RBP15.33■□□□□ 0.04
SIRPB3P-201ENST00000340424 ICAM3P32942 547 aa15.33■□□□□ 0.04
SIRPB3P-201ENST00000340424 METAP2P50579 478 aaKnown RBP eCLIP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms