RNA–Protein interactions for RNA: ENST00000340196.8

CCDC144CP-201, Transcript of coiled-coil domain containing 144C, pseudogene, humanhuman

TSL 2 BASIC

Gene CCDC144CP, Length 2,823 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CP-201ENST00000340196 NUDT12Q9BQG2 462 aa13.28□□□□□ -0.28
CCDC144CP-201ENST00000340196 MMTAG2Q9BU76 263 aaKnown RBP13.28□□□□□ -0.28
CCDC144CP-201ENST00000340196 SH2D4AQ9H788 454 aa13.28□□□□□ -0.28
CCDC144CP-201ENST00000340196 BIN2Q9UBW5 565 aaPredicted RBP13.28□□□□□ -0.28
CCDC144CP-201ENST00000340196 MKRN1Q9UHC7 482 aaKnown RBP13.28□□□□□ -0.28
CCDC144CP-201ENST00000340196 STXBP3O00186 592 aa13.27□□□□□ -0.28
CCDC144CP-201ENST00000340196 FTCDO95954 541 aa13.27□□□□□ -0.28
CCDC144CP-201ENST00000340196 CCDC172P0C7W6 258 aa13.27□□□□□ -0.28
CCDC144CP-201ENST00000340196 USP17L2Q6R6M4 530 aa13.27□□□□□ -0.28
CCDC144CP-201ENST00000340196 KRT27Q7Z3Y8 459 aa13.27□□□□□ -0.28
CCDC144CP-201ENST00000340196 TBC1D7Q9P0N9 293 aa13.27□□□□□ -0.28
CCDC144CP-201ENST00000340196 FAM184BQ9ULE4 1060 aa13.27□□□□□ -0.28
CCDC144CP-201ENST00000340196 POTEMA6NI47 508 aa13.27□□□□□ -0.29
CCDC144CP-201ENST00000340196 GLI1P08151 1106 aa13.27□□□□□ -0.29
CCDC144CP-201ENST00000340196 CARSP49589 748 aaKnown RBP13.27□□□□□ -0.29
CCDC144CP-201ENST00000340196 KCNB1Q14721 858 aa13.27□□□□□ -0.29
CCDC144CP-201ENST00000340196 SLC10A5Q5PT55 438 aa13.27□□□□□ -0.29
CCDC144CP-201ENST00000340196 SH3RF3Q8TEJ3 882 aaPredicted RBP13.27□□□□□ -0.29
CCDC144CP-201ENST00000340196 IFT81Q8WYA0 676 aa13.27□□□□□ -0.29
CCDC144CP-201ENST00000340196 FGFBP2Q9BYJ0 223 aa13.27□□□□□ -0.29
CCDC144CP-201ENST00000340196 CRNKL1Q9BZJ0 848 aaKnown RBP13.27□□□□□ -0.29
CCDC144CP-201ENST00000340196 RTCBQ9Y3I0 505 aaKnown RBP13.27□□□□□ -0.29
CCDC144CP-201ENST00000340196 TARSL2A2RTX5 802 aaKnown RBP13.26□□□□□ -0.29
CCDC144CP-201ENST00000340196 ORC4O43929 436 aa13.26□□□□□ -0.29
CCDC144CP-201ENST00000340196 ZEB2O60315 1214 aa13.26□□□□□ -0.29
CCDC144CP-201ENST00000340196 CACNB1Q02641 598 aaPredicted RBP13.26□□□□□ -0.29
CCDC144CP-201ENST00000340196 CAPS2Q9BXY5 557 aa13.26□□□□□ -0.29
CCDC144CP-201ENST00000340196 UBA5Q9GZZ9 404 aa13.26□□□□□ -0.29
CCDC144CP-201ENST00000340196 NFU1Q9UMS0 254 aa13.26□□□□□ -0.29
CCDC144CP-201ENST00000340196 GNPATO15228 680 aa13.26□□□□□ -0.29
CCDC144CP-201ENST00000340196 NAPAP54920 295 aa13.26□□□□□ -0.29
CCDC144CP-201ENST00000340196 TDRD12Q587J7 1177 aaKnown RBP13.26□□□□□ -0.29
CCDC144CP-201ENST00000340196 ZNF772Q68DY9 489 aaPredicted RBP13.26□□□□□ -0.29
CCDC144CP-201ENST00000340196 KCNK18Q7Z418 384 aa13.26□□□□□ -0.29
CCDC144CP-201ENST00000340196 CLEC10AQ8IUN9 316 aa13.26□□□□□ -0.29
CCDC144CP-201ENST00000340196 TANGO6Q9C0B7 1094 aa13.26□□□□□ -0.29
CCDC144CP-201ENST00000340196 MKNK2Q9HBH9 465 aa13.26□□□□□ -0.29
CCDC144CP-201ENST00000340196 FAM169AQ9Y6X4 670 aa13.26□□□□□ -0.29
CCDC144CP-201ENST00000340196 CASZ1Q86V15 1759 aa13.26□□□□□ -0.29
CCDC144CP-201ENST00000340196 MYMKA6NI61 221 aa13.26□□□□□ -0.29
CCDC144CP-201ENST00000340196 CALML3P27482 149 aa13.26□□□□□ -0.29
CCDC144CP-201ENST00000340196 CCDC181Q5TID7 509 aa13.26□□□□□ -0.29
CCDC144CP-201ENST00000340196 MAPKAPK5Q8IW41 473 aa13.26□□□□□ -0.29
CCDC144CP-201ENST00000340196 ZIM3Q96PE6 472 aa13.26□□□□□ -0.29
CCDC144CP-201ENST00000340196 TLR10Q9BXR5 811 aa13.26□□□□□ -0.29
CCDC144CP-201ENST00000340196 NDST4Q9H3R1 872 aa13.26□□□□□ -0.29
CCDC144CP-201ENST00000340196 SIK3Q9Y2K2 1263 aa13.26□□□□□ -0.29
CCDC144CP-201ENST00000340196 KIF5BP33176 963 aa13.25□□□□□ -0.29
CCDC144CP-201ENST00000340196 TUBB4BP68371 445 aa13.25□□□□□ -0.29
CCDC144CP-201ENST00000340196 GUCY1A3Q02108 690 aa13.25□□□□□ -0.29
CCDC144CP-201ENST00000340196 SF3B3Q15393 1217 aaKnown RBP13.25□□□□□ -0.29
CCDC144CP-201ENST00000340196 TADA2BQ86TJ2 420 aa13.25□□□□□ -0.29
CCDC144CP-201ENST00000340196 TGFBRAP1Q8WUH2 860 aa13.25□□□□□ -0.29
CCDC144CP-201ENST00000340196 PACSIN1Q9BY11 444 aa13.25□□□□□ -0.29
CCDC144CP-201ENST00000340196 FAM107BQ9H098 131 aa13.25□□□□□ -0.29
CCDC144CP-201ENST00000340196 LRRC4BQ9NT99 713 aa13.25□□□□□ -0.29
CCDC144CP-201ENST00000340196 A0A1B0GUL6 1792 aa13.25□□□□□ -0.29
CCDC144CP-201ENST00000340196 TACC1O75410 805 aa13.25□□□□□ -0.29
CCDC144CP-201ENST00000340196 OR52Z1P0C646 297 aa13.25□□□□□ -0.29
CCDC144CP-201ENST00000340196 TSPY3P0CV98 308 aa13.25□□□□□ -0.29
CCDC144CP-201ENST00000340196 TSPY8P0CW00 308 aa13.25□□□□□ -0.29
CCDC144CP-201ENST00000340196 MAGEA1P43355 309 aa13.25□□□□□ -0.29
CCDC144CP-201ENST00000340196 SLC27A3Q5K4L6 730 aa13.25□□□□□ -0.29
CCDC144CP-201ENST00000340196 TBC1D9BQ66K14 1250 aa13.25□□□□□ -0.29
CCDC144CP-201ENST00000340196 AMIGO3Q86WK7 504 aa13.25□□□□□ -0.29
CCDC144CP-201ENST00000340196 EHBP1Q8NDI1 1231 aa13.25□□□□□ -0.29
CCDC144CP-201ENST00000340196 TBCKQ8TEA7 893 aa13.25□□□□□ -0.29
CCDC144CP-201ENST00000340196 ARHGEF1Q92888 912 aaKnown RBP13.25□□□□□ -0.29
CCDC144CP-201ENST00000340196 DHTKD1Q96HY7 919 aaPredicted RBP13.25□□□□□ -0.29
CCDC144CP-201ENST00000340196 TMEM47Q9BQJ4 181 aa13.25□□□□□ -0.29
CCDC144CP-201ENST00000340196 CCSER1Q9C0I3 900 aa13.25□□□□□ -0.29
CCDC144CP-201ENST00000340196 TCP11L1Q9NUJ3 509 aa13.25□□□□□ -0.29
CCDC144CP-201ENST00000340196 PLAGL2Q9UPG8 496 aa13.25□□□□□ -0.29
CCDC144CP-201ENST00000340196 UBR3Q6ZT12 1888 aa13.25□□□□□ -0.29
CCDC144CP-201ENST00000340196 ANO9A1A5B4 782 aa13.24□□□□□ -0.29
CCDC144CP-201ENST00000340196 BACH1O14867 736 aa13.24□□□□□ -0.29
CCDC144CP-201ENST00000340196 SLC37A4O43826 429 aa13.24□□□□□ -0.29
CCDC144CP-201ENST00000340196 SHOX2O60902 331 aaPredicted RBP13.24□□□□□ -0.29
CCDC144CP-201ENST00000340196 TDP2O95551 362 aa13.24□□□□□ -0.29
CCDC144CP-201ENST00000340196 TUBBP07437 444 aa13.24□□□□□ -0.29
CCDC144CP-201ENST00000340196 EIF6P56537 245 aaKnown RBP13.24□□□□□ -0.29
CCDC144CP-201ENST00000340196 DZIP1Q86YF9 867 aaKnown RBP13.24□□□□□ -0.29
CCDC144CP-201ENST00000340196 CCDC170Q8IYT3 715 aa13.24□□□□□ -0.29
CCDC144CP-201ENST00000340196 CCDC43Q96MW1 224 aaKnown RBP13.24□□□□□ -0.29
CCDC144CP-201ENST00000340196 BARHL2Q9NY43 387 aa13.24□□□□□ -0.29
CCDC144CP-201ENST00000340196 SMCO2A6NFE2 343 aa13.24□□□□□ -0.29
CCDC144CP-201ENST00000340196 KLRF2D3W0D1 207 aa13.24□□□□□ -0.29
CCDC144CP-201ENST00000340196 GUCY2DQ02846 1103 aa13.24□□□□□ -0.29
CCDC144CP-201ENST00000340196 UBE4AQ14139 1066 aa13.24□□□□□ -0.29
CCDC144CP-201ENST00000340196 VWA3BQ502W6 1294 aa13.24□□□□□ -0.29
CCDC144CP-201ENST00000340196 KLHDC7AQ5VTJ3 777 aa13.24□□□□□ -0.29
CCDC144CP-201ENST00000340196 C8orf74Q6P047 294 aa13.24□□□□□ -0.29
CCDC144CP-201ENST00000340196 TRIM58Q8NG06 486 aa13.24□□□□□ -0.29
CCDC144CP-201ENST00000340196 ERGIC2Q96RQ1 377 aa13.24□□□□□ -0.29
CCDC144CP-201ENST00000340196 BLOC1S4Q9NUP1 217 aa13.24□□□□□ -0.29
CCDC144CP-201ENST00000340196 STIM2Q9P246 746 aa13.24□□□□□ -0.29
CCDC144CP-201ENST00000340196 FRMPD2Q68DX3 1309 aaPredicted RBP13.23□□□□□ -0.29
CCDC144CP-201ENST00000340196 SEC24CP53992 1094 aa13.23□□□□□ -0.29
CCDC144CP-201ENST00000340196 TMEM132AQ24JP5 1023 aa13.23□□□□□ -0.29
CCDC144CP-201ENST00000340196 TMED8Q6PL24 325 aaPredicted RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms