RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 PEX19P40855 299 aa11.49□□□□□ -0.57
CLN8-201ENST00000331222 PTH1RQ03431 593 aa11.49□□□□□ -0.57
CLN8-201ENST00000331222 OR52Z1P0C646 297 aa11.48□□□□□ -0.57
CLN8-201ENST00000331222 ANXA13P27216 316 aa11.48□□□□□ -0.57
CLN8-201ENST00000331222 CCND2P30279 289 aa11.48□□□□□ -0.57
CLN8-201ENST00000331222 NEK8Q86SG6 692 aa11.48□□□□□ -0.57
CLN8-201ENST00000331222 RNF139Q8WU17 664 aa11.48□□□□□ -0.57
CLN8-201ENST00000331222 PPFIA2O75334 1257 aa11.48□□□□□ -0.57
CLN8-201ENST00000331222 ESRRBO95718 433 aa11.48□□□□□ -0.57
CLN8-201ENST00000331222 DCAF4L1Q3SXM0 396 aa11.48□□□□□ -0.57
CLN8-201ENST00000331222 LRRC8CQ8TDW0 803 aa11.48□□□□□ -0.57
CLN8-201ENST00000331222 A0A0D9SFI3 127 aa11.48□□□□□ -0.57
CLN8-201ENST00000331222 GPC4O75487 556 aa11.48□□□□□ -0.57
CLN8-201ENST00000331222 MAPK4P31152 587 aa11.48□□□□□ -0.57
CLN8-201ENST00000331222 ZNF394Q53GI3 561 aa11.48□□□□□ -0.57
CLN8-201ENST00000331222 ARMC9Q7Z3E5 817 aa11.48□□□□□ -0.57
CLN8-201ENST00000331222 GRAMD1CQ8IYS0 662 aa11.48□□□□□ -0.57
CLN8-201ENST00000331222 RETREG2Q8NC44 543 aa11.48□□□□□ -0.57
CLN8-201ENST00000331222 GRK7Q8WTQ7 553 aa11.48□□□□□ -0.57
CLN8-201ENST00000331222 OTULINQ96BN8 352 aa11.48□□□□□ -0.57
CLN8-201ENST00000331222 CHAMP1Q96JM3 812 aa11.48□□□□□ -0.57
CLN8-201ENST00000331222 CEP170P1Q96L14 293 aa11.48□□□□□ -0.57
CLN8-201ENST00000331222 HPS4Q9NQG7 708 aa11.48□□□□□ -0.57
CLN8-201ENST00000331222 SLCO1A2P46721 670 aa11.48□□□□□ -0.57
CLN8-201ENST00000331222 DSTYKQ6XUX3 929 aa11.48□□□□□ -0.57
CLN8-201ENST00000331222 SLC12A6Q9UHW9 1150 aa11.48□□□□□ -0.57
CLN8-201ENST00000331222 H3BRJ5 948 aa11.48□□□□□ -0.57
CLN8-201ENST00000331222 PPFIA4O75335 1185 aa11.48□□□□□ -0.57
CLN8-201ENST00000331222 NSFP46459 744 aaKnown RBP11.48□□□□□ -0.57
CLN8-201ENST00000331222 ACCSLQ4AC99 568 aa11.48□□□□□ -0.57
CLN8-201ENST00000331222 TRIM59Q8IWR1 403 aa11.48□□□□□ -0.57
CLN8-201ENST00000331222 CARD14Q9BXL6 1004 aa11.48□□□□□ -0.57
CLN8-201ENST00000331222 AFF4Q9UHB7 1163 aaKnown RBP11.48□□□□□ -0.57
CLN8-201ENST00000331222 CFLARO15519 480 aa11.48□□□□□ -0.57
CLN8-201ENST00000331222 STMN1P16949 149 aa11.48□□□□□ -0.57
CLN8-201ENST00000331222 NDUFA8P51970 172 aa11.48□□□□□ -0.57
CLN8-201ENST00000331222 EXOC3L4Q17RC7 722 aa11.48□□□□□ -0.57
CLN8-201ENST00000331222 MAIP1Q8WWC4 291 aa11.48□□□□□ -0.57
CLN8-201ENST00000331222 LRRC4Q9HBW1 653 aa11.48□□□□□ -0.57
CLN8-201ENST00000331222 GDAQ9Y2T3 454 aa11.48□□□□□ -0.57
CLN8-201ENST00000331222 NEMP1O14524 444 aa11.47□□□□□ -0.57
CLN8-201ENST00000331222 TTC4O95801 387 aa11.47□□□□□ -0.57
CLN8-201ENST00000331222 GUCY2DQ02846 1103 aa11.47□□□□□ -0.57
CLN8-201ENST00000331222 C2orf54Q08AI8 447 aa11.47□□□□□ -0.57
CLN8-201ENST00000331222 ASPHQ12797 758 aa11.47□□□□□ -0.57
CLN8-201ENST00000331222 CCDC157Q569K6 752 aa11.47□□□□□ -0.57
CLN8-201ENST00000331222 MARCH10Q8NA82 808 aaPredicted RBP11.47□□□□□ -0.57
CLN8-201ENST00000331222 COG4Q9H9E3 785 aa11.47□□□□□ -0.57
CLN8-201ENST00000331222 UBE2TQ9NPD8 197 aaPredicted RBP11.47□□□□□ -0.57
CLN8-201ENST00000331222 KLHL14Q9P2G3 628 aa11.47□□□□□ -0.57
CLN8-201ENST00000331222 ORC6Q9Y5N6 252 aa11.47□□□□□ -0.57
CLN8-201ENST00000331222 TNKSO95271 1327 aa11.47□□□□□ -0.57
CLN8-201ENST00000331222 ATP2B4P23634 1241 aa11.47□□□□□ -0.57
CLN8-201ENST00000331222 TUBB4BP68371 445 aa11.47□□□□□ -0.57
CLN8-201ENST00000331222 TBCCQ15814 346 aa11.47□□□□□ -0.57
CLN8-201ENST00000331222 PASD1Q8IV76 773 aa11.47□□□□□ -0.57
CLN8-201ENST00000331222 AFG1LQ8WV93 481 aa11.47□□□□□ -0.57
CLN8-201ENST00000331222 MAFGO15525 162 aa11.47□□□□□ -0.57
CLN8-201ENST00000331222 CDC25AP30304 524 aa11.47□□□□□ -0.57
CLN8-201ENST00000331222 ERFEQ4G0M1 354 aa11.47□□□□□ -0.57
CLN8-201ENST00000331222 USP17L2Q6R6M4 530 aa11.47□□□□□ -0.57
CLN8-201ENST00000331222 TTC25Q96NG3 672 aa11.47□□□□□ -0.57
CLN8-201ENST00000331222 VCX3AQ9NNX9 186 aa11.47□□□□□ -0.57
CLN8-201ENST00000331222 ASXL2Q76L83 1435 aa11.47□□□□□ -0.57
CLN8-201ENST00000331222 A2MP01023 1474 aa11.47□□□□□ -0.57
CLN8-201ENST00000331222 MYL1P05976 194 aa11.47□□□□□ -0.57
CLN8-201ENST00000331222 CACNB2Q08289 660 aaPredicted RBP11.47□□□□□ -0.57
CLN8-201ENST00000331222 KIF19Q2TAC6 998 aa11.47□□□□□ -0.57
CLN8-201ENST00000331222 RSBN1LQ6PCB5 846 aaPredicted RBP11.47□□□□□ -0.57
CLN8-201ENST00000331222 SCN4BQ8IWT1 228 aa11.47□□□□□ -0.57
CLN8-201ENST00000331222 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.47□□□□□ -0.57
CLN8-201ENST00000331222 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.47□□□□□ -0.57
CLN8-201ENST00000331222 PI4K2BG5E9Z4 385 aa11.47□□□□□ -0.57
CLN8-201ENST00000331222 ARHGAP6O43182 974 aa11.47□□□□□ -0.57
CLN8-201ENST00000331222 GFPT2O94808 682 aa11.47□□□□□ -0.57
CLN8-201ENST00000331222 OCM2P0CE71 109 aa11.47□□□□□ -0.57
CLN8-201ENST00000331222 OCMP0CE72 109 aaPredicted RBP11.47□□□□□ -0.57
CLN8-201ENST00000331222 PTK2Q05397 1052 aa11.47□□□□□ -0.57
CLN8-201ENST00000331222 MTMR3Q13615 1198 aa11.47□□□□□ -0.57
CLN8-201ENST00000331222 FAM180AQ6UWF9 173 aa11.47□□□□□ -0.57
CLN8-201ENST00000331222 MAGOHBQ96A72 148 aaKnown RBP11.47□□□□□ -0.57
CLN8-201ENST00000331222 SCHIP1Q9P0W5 487 aaPredicted RBP11.47□□□□□ -0.57
CLN8-201ENST00000331222 SLAIN2Q9P270 581 aa11.47□□□□□ -0.57
CLN8-201ENST00000331222 FBXL5Q9UKA1 691 aa11.47□□□□□ -0.57
CLN8-201ENST00000331222 SLC13A4Q9UKG4 626 aa11.47□□□□□ -0.57
CLN8-201ENST00000331222 TFDP1Q14186 410 aa11.47□□□□□ -0.57
CLN8-201ENST00000331222 CAPRIN1Q14444 709 aaKnown RBP11.47□□□□□ -0.57
CLN8-201ENST00000331222 SLC10A4Q96EP9 437 aa11.47□□□□□ -0.57
CLN8-201ENST00000331222 ZNF804BA4D1E1 1349 aa11.47□□□□□ -0.57
CLN8-201ENST00000331222 CTTNBP2Q8WZ74 1663 aa11.46□□□□□ -0.57
CLN8-201ENST00000331222 GRIN2AQ12879 1464 aa11.46□□□□□ -0.57
CLN8-201ENST00000331222 PHKA1P46020 1223 aa11.46□□□□□ -0.57
CLN8-201ENST00000331222 STAT2P52630 851 aa11.46□□□□□ -0.57
CLN8-201ENST00000331222 CACNB3P54284 484 aa11.46□□□□□ -0.57
CLN8-201ENST00000331222 MRPS25P82663 173 aaKnown RBP11.46□□□□□ -0.57
CLN8-201ENST00000331222 ATL3Q6DD88 541 aa11.46□□□□□ -0.57
CLN8-201ENST00000331222 INTS4Q96HW7 963 aaKnown RBP11.46□□□□□ -0.57
CLN8-201ENST00000331222 HAUS8Q9BT25 410 aa11.46□□□□□ -0.57
CLN8-201ENST00000331222 ASAP1Q9ULH1 1129 aa11.46□□□□□ -0.57
CLN8-201ENST00000331222 BTBD18B2RXH4 712 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms