RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 PPP1R37O75864 691 aa15.35■□□□□ 0.05
EPHB3-201ENST00000330394 SNX1Q13596 522 aa15.35■□□□□ 0.05
EPHB3-201ENST00000330394 ALKBH5Q6P6C2 394 aaKnown RBP15.35■□□□□ 0.05
EPHB3-201ENST00000330394 SNX24Q9Y343 169 aa15.35■□□□□ 0.05
EPHB3-201ENST00000330394 H0Y3Z8 333 aa15.35■□□□□ 0.05
EPHB3-201ENST00000330394 GFPT2O94808 682 aa15.35■□□□□ 0.05
EPHB3-201ENST00000330394 HDLBPQ00341 1268 aaKnown RBP15.35■□□□□ 0.05
EPHB3-201ENST00000330394 CYP4F22Q6NT55 531 aa15.35■□□□□ 0.05
EPHB3-201ENST00000330394 NEO1Q92859 1461 aa15.34■□□□□ 0.05
EPHB3-201ENST00000330394 ABCC12Q96J65 1359 aa15.34■□□□□ 0.05
EPHB3-201ENST00000330394 POC1B-GALNT4F8VUJ3 575 aa15.34■□□□□ 0.05
EPHB3-201ENST00000330394 BAG2O95816 211 aa15.34■□□□□ 0.05
EPHB3-201ENST00000330394 HNRNPH1P31943 449 aaKnown RBP15.34■□□□□ 0.05
EPHB3-201ENST00000330394 TAF11Q15544 211 aa15.34■□□□□ 0.05
EPHB3-201ENST00000330394 RASIP1Q5U651 963 aa15.34■□□□□ 0.05
EPHB3-201ENST00000330394 CCDC62Q6P9F0 684 aa15.34■□□□□ 0.05
EPHB3-201ENST00000330394 RNF14Q9UBS8 474 aa15.34■□□□□ 0.05
EPHB3-201ENST00000330394 GNA14O95837 355 aa15.34■□□□□ 0.05
EPHB3-201ENST00000330394 MMEP08473 750 aa15.34■□□□□ 0.05
EPHB3-201ENST00000330394 PRR16Q569H4 304 aa15.34■□□□□ 0.05
EPHB3-201ENST00000330394 USP37Q86T82 979 aa15.34■□□□□ 0.05
EPHB3-201ENST00000330394 OR2W6PQ8NHA6 318 aa15.34■□□□□ 0.05
EPHB3-201ENST00000330394 KCNV2Q8TDN2 545 aa15.34■□□□□ 0.05
EPHB3-201ENST00000330394 CCT8L2Q96SF2 557 aa15.34■□□□□ 0.05
EPHB3-201ENST00000330394 COL4A3BPQ9Y5P4 624 aa15.34■□□□□ 0.05
EPHB3-201ENST00000330394 FGGP02679 453 aa15.34■□□□□ 0.05
EPHB3-201ENST00000330394 HVCN1Q96D96 273 aa15.34■□□□□ 0.05
EPHB3-201ENST00000330394 NT5C3AQ9H0P0 336 aa15.34■□□□□ 0.05
EPHB3-201ENST00000330394 ARPP21Q9UBL0 812 aaPredicted RBP15.34■□□□□ 0.05
EPHB3-201ENST00000330394 ZBTB1Q9Y2K1 713 aa15.34■□□□□ 0.05
EPHB3-201ENST00000330394 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.34■□□□□ 0.05
EPHB3-201ENST00000330394 DUSP10Q9Y6W6 482 aa15.34■□□□□ 0.05
EPHB3-201ENST00000330394 LRRD1A4D1F6 860 aa15.33■□□□□ 0.05
EPHB3-201ENST00000330394 HSPA1LP34931 641 aa15.33■□□□□ 0.05
EPHB3-201ENST00000330394 SLC1A4P43007 532 aa15.33■□□□□ 0.05
EPHB3-201ENST00000330394 DYNLL2Q96FJ2 89 aa15.33■□□□□ 0.05
EPHB3-201ENST00000330394 SNX12Q9UMY4 172 aa15.33■□□□□ 0.05
EPHB3-201ENST00000330394 CIB2O75838 187 aa15.33■□□□□ 0.04
EPHB3-201ENST00000330394 PLCG2P16885 1265 aa15.33■□□□□ 0.04
EPHB3-201ENST00000330394 ZNF449Q6P9G9 518 aa15.33■□□□□ 0.04
EPHB3-201ENST00000330394 ATG9AQ7Z3C6 839 aa15.33■□□□□ 0.04
EPHB3-201ENST00000330394 NEK9Q8TD19 979 aa15.33■□□□□ 0.04
EPHB3-201ENST00000330394 GBP5Q96PP8 586 aa15.33■□□□□ 0.04
EPHB3-201ENST00000330394 YIPF3Q9GZM5 350 aa15.33■□□□□ 0.04
EPHB3-201ENST00000330394 FAM114A2Q9NRY5 505 aa15.33■□□□□ 0.04
EPHB3-201ENST00000330394 BTG4Q9NY30 223 aa15.33■□□□□ 0.04
EPHB3-201ENST00000330394 BAZ2BQ9UIF8 2168 aaKnown RBP15.33■□□□□ 0.04
EPHB3-201ENST00000330394 ARHGEF35A5YM69 484 aa15.33■□□□□ 0.04
EPHB3-201ENST00000330394 ACSL3O95573 720 aa15.33■□□□□ 0.04
EPHB3-201ENST00000330394 BCRP11274 1271 aa15.33■□□□□ 0.04
EPHB3-201ENST00000330394 FCER1AP12319 257 aa15.33■□□□□ 0.04
EPHB3-201ENST00000330394 TRIP13Q15645 432 aaPredicted RBP15.33■□□□□ 0.04
EPHB3-201ENST00000330394 TBC1D10BQ4KMP7 808 aaPredicted RBP15.33■□□□□ 0.04
EPHB3-201ENST00000330394 USP17L2Q6R6M4 530 aa15.33■□□□□ 0.04
EPHB3-201ENST00000330394 PARP2Q9UGN5 583 aa15.33■□□□□ 0.04
EPHB3-201ENST00000330394 REREQ9P2R6 1566 aa15.33■□□□□ 0.04
EPHB3-201ENST00000330394 DDB1Q16531 1140 aa15.32■□□□□ 0.04
EPHB3-201ENST00000330394 PARP10Q53GL7 1025 aa15.32■□□□□ 0.04
EPHB3-201ENST00000330394 HNRNPLLQ8WVV9 542 aaKnown RBP15.32■□□□□ 0.04
EPHB3-201ENST00000330394 COA7Q96BR5 231 aa15.32■□□□□ 0.04
EPHB3-201ENST00000330394 STAMBPO95630 424 aa15.32■□□□□ 0.04
EPHB3-201ENST00000330394 CARSP49589 748 aaKnown RBP15.32■□□□□ 0.04
EPHB3-201ENST00000330394 ATP6V1G3Q96LB4 118 aa15.32■□□□□ 0.04
EPHB3-201ENST00000330394 HPS5Q9UPZ3 1129 aa15.32■□□□□ 0.04
EPHB3-201ENST00000330394 USP17L3A6NCW0 530 aa15.32■□□□□ 0.04
EPHB3-201ENST00000330394 USP17L4A6NCW7 530 aa15.32■□□□□ 0.04
EPHB3-201ENST00000330394 RASGRF2O14827 1237 aa15.32■□□□□ 0.04
EPHB3-201ENST00000330394 USP17L8P0C7I0 530 aa15.32■□□□□ 0.04
EPHB3-201ENST00000330394 PPP4R3AQ6IN85 833 aa15.32■□□□□ 0.04
EPHB3-201ENST00000330394 USP17L1Q7RTZ2 530 aa15.32■□□□□ 0.04
EPHB3-201ENST00000330394 PPM1KQ8N3J5 372 aa15.32■□□□□ 0.04
EPHB3-201ENST00000330394 ENAHQ8N8S7 591 aaPredicted RBP15.32■□□□□ 0.04
EPHB3-201ENST00000330394 ANKRD2Q9GZV1 360 aa15.32■□□□□ 0.04
EPHB3-201ENST00000330394 ANKZF1Q9H8Y5 726 aa15.32■□□□□ 0.04
EPHB3-201ENST00000330394 HAUS2Q9NVX0 235 aa15.32■□□□□ 0.04
EPHB3-201ENST00000330394 AGTPBP1Q9UPW5 1226 aa15.32■□□□□ 0.04
EPHB3-201ENST00000330394 MEIS1O00470 390 aa15.32■□□□□ 0.04
EPHB3-201ENST00000330394 ZRANB2O95218 330 aaKnown RBP eCLIP15.32■□□□□ 0.04
EPHB3-201ENST00000330394 SERPING1P05155 500 aa15.32■□□□□ 0.04
EPHB3-201ENST00000330394 TMOD1P28289 359 aa15.32■□□□□ 0.04
EPHB3-201ENST00000330394 RASSF2P50749 326 aa15.32■□□□□ 0.04
EPHB3-201ENST00000330394 POLE2P56282 527 aa15.32■□□□□ 0.04
EPHB3-201ENST00000330394 ERVK-24P63145 666 aa15.32■□□□□ 0.04
EPHB3-201ENST00000330394 RBBP5Q15291 538 aaKnown RBP15.32■□□□□ 0.04
EPHB3-201ENST00000330394 FAM47EQ6ZV65 393 aa15.32■□□□□ 0.04
EPHB3-201ENST00000330394 FOXP4Q8IVH2 680 aaPredicted RBP15.32■□□□□ 0.04
EPHB3-201ENST00000330394 SCYL3Q8IZE3 742 aa15.32■□□□□ 0.04
EPHB3-201ENST00000330394 KAZALD1Q96I82 304 aa15.32■□□□□ 0.04
EPHB3-201ENST00000330394 VIPAS39Q9H9C1 493 aa15.32■□□□□ 0.04
EPHB3-201ENST00000330394 CD248Q9HCU0 757 aa15.32■□□□□ 0.04
EPHB3-201ENST00000330394 LIMA1Q9UHB6 759 aaKnown RBP15.32■□□□□ 0.04
EPHB3-201ENST00000330394 DDX25Q9UHL0 483 aaKnown RBP15.32■□□□□ 0.04
EPHB3-201ENST00000330394 ADGRB3O60242 1522 aa15.31■□□□□ 0.04
EPHB3-201ENST00000330394 CEP152O94986 1710 aa15.31■□□□□ 0.04
EPHB3-201ENST00000330394 ARHGAP31Q2M1Z3 1444 aa15.31■□□□□ 0.04
EPHB3-201ENST00000330394 CFBP00751 764 aa15.31■□□□□ 0.04
EPHB3-201ENST00000330394 KLK7P49862 253 aa15.31■□□□□ 0.04
EPHB3-201ENST00000330394 LRRC14Q15048 493 aa15.31■□□□□ 0.04
EPHB3-201ENST00000330394 PPP1R21Q6ZMI0 780 aa15.31■□□□□ 0.04
EPHB3-201ENST00000330394 KCNB2Q92953 911 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms