RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 IGHMBP2P38935 993 aaKnown RBP19.74■□□□□ 0.75
PRKCB-202ENST00000321728 PPP1R2P41236 205 aa19.74■□□□□ 0.75
PRKCB-202ENST00000321728 MMP14P50281 582 aa19.74■□□□□ 0.75
PRKCB-202ENST00000321728 HLTFQ14527 1009 aaKnown RBP eCLIP19.74■□□□□ 0.75
PRKCB-202ENST00000321728 KIAA0895Q8NCT3 520 aa19.74■□□□□ 0.75
PRKCB-202ENST00000321728 BTG4Q9NY30 223 aa19.74■□□□□ 0.75
PRKCB-202ENST00000321728 SUFUQ9UMX1 484 aa19.74■□□□□ 0.75
PRKCB-202ENST00000321728 PCDHA6Q9UN73 950 aa19.74■□□□□ 0.75
PRKCB-202ENST00000321728 CEP83Q9Y592 693 aa19.74■□□□□ 0.75
PRKCB-202ENST00000321728 PCDHA8Q9Y5H6 950 aa19.74■□□□□ 0.75
PRKCB-202ENST00000321728 SLIT2O94813 1529 aa19.74■□□□□ 0.75
PRKCB-202ENST00000321728 PCP11498 1178 aaKnown RBP19.74■□□□□ 0.75
PRKCB-202ENST00000321728 MAN2A1Q16706 1144 aa19.74■□□□□ 0.75
PRKCB-202ENST00000321728 TANGO6Q9C0B7 1094 aa19.74■□□□□ 0.75
PRKCB-202ENST00000321728 MAGEF1Q9HAY2 307 aa19.74■□□□□ 0.75
PRKCB-202ENST00000321728 SLC40A1Q9NP59 571 aa19.74■□□□□ 0.75
PRKCB-202ENST00000321728 DONSONQ9NYP3 566 aa19.74■□□□□ 0.75
PRKCB-202ENST00000321728 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.74■□□□□ 0.75
PRKCB-202ENST00000321728 TSPY2A6NKD2 308 aa19.73■□□□□ 0.75
PRKCB-202ENST00000321728 FGRP09769 529 aa19.73■□□□□ 0.75
PRKCB-202ENST00000321728 NEDD9Q14511 834 aa19.73■□□□□ 0.75
PRKCB-202ENST00000321728 SMIM5Q71RC9 77 aa19.73■□□□□ 0.75
PRKCB-202ENST00000321728 RPAINQ86UA6 219 aa19.73■□□□□ 0.75
PRKCB-202ENST00000321728 KLHL7Q8IXQ5 586 aa19.73■□□□□ 0.75
PRKCB-202ENST00000321728 CYFIP2Q96F07 1278 aa19.73■□□□□ 0.75
PRKCB-202ENST00000321728 C7orf25Q9BPX7 421 aa19.73■□□□□ 0.75
PRKCB-202ENST00000321728 PACSIN2Q9UNF0 486 aaPredicted RBP19.73■□□□□ 0.75
PRKCB-202ENST00000321728 CHRM1P11229 460 aaPredicted RBP19.73■□□□□ 0.75
PRKCB-202ENST00000321728 PSEN1P49768 467 aa19.73■□□□□ 0.75
PRKCB-202ENST00000321728 AMPD3Q01432 767 aa19.73■□□□□ 0.75
PRKCB-202ENST00000321728 HEATR3Q7Z4Q2 680 aa19.73■□□□□ 0.75
PRKCB-202ENST00000321728 BAP1Q92560 729 aa19.73■□□□□ 0.75
PRKCB-202ENST00000321728 NLRC4Q9NPP4 1024 aa19.73■□□□□ 0.75
PRKCB-202ENST00000321728 GOLGA6L7A0A1B0GV03 622 aa19.72■□□□□ 0.75
PRKCB-202ENST00000321728 RASSF9O75901 435 aa19.72■□□□□ 0.75
PRKCB-202ENST00000321728 CHRNDQ07001 517 aa19.72■□□□□ 0.75
PRKCB-202ENST00000321728 EHHADHQ08426 723 aa19.72■□□□□ 0.75
PRKCB-202ENST00000321728 PLCB4Q15147 1175 aa19.72■□□□□ 0.75
PRKCB-202ENST00000321728 PDXDC1Q6P996 788 aa19.72■□□□□ 0.75
PRKCB-202ENST00000321728 ARFGAP2Q8N6H7 521 aa19.72■□□□□ 0.75
PRKCB-202ENST00000321728 FLT1P17948 1338 aa19.72■□□□□ 0.75
PRKCB-202ENST00000321728 GCOM1H8Y6P7 765 aaPredicted RBP19.72■□□□□ 0.75
PRKCB-202ENST00000321728 MYZAPP0CAP1 466 aa19.72■□□□□ 0.75
PRKCB-202ENST00000321728 CDC37Q16543 378 aaPredicted RBP19.72■□□□□ 0.75
PRKCB-202ENST00000321728 PPP4R3AQ6IN85 833 aa19.72■□□□□ 0.75
PRKCB-202ENST00000321728 CENPPQ6IPU0 288 aa19.72■□□□□ 0.75
PRKCB-202ENST00000321728 ACSBG1Q96GR2 724 aa19.72■□□□□ 0.75
PRKCB-202ENST00000321728 SH3GLB2Q9NR46 395 aa19.72■□□□□ 0.75
PRKCB-202ENST00000321728 BCCIPQ9P287 314 aaKnown RBP eCLIP19.72■□□□□ 0.75
PRKCB-202ENST00000321728 RAD51CO43502 376 aa19.71■□□□□ 0.75
PRKCB-202ENST00000321728 SSBP05455 408 aaKnown RBP eCLIP19.71■□□□□ 0.75
PRKCB-202ENST00000321728 ASTE1Q2TB18 679 aaPredicted RBP19.71■□□□□ 0.75
PRKCB-202ENST00000321728 CEP57Q86XR8 500 aa19.71■□□□□ 0.75
PRKCB-202ENST00000321728 STAG2Q8N3U4 1231 aa19.71■□□□□ 0.75
PRKCB-202ENST00000321728 GGA2Q9UJY4 613 aa19.71■□□□□ 0.75
PRKCB-202ENST00000321728 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.71■□□□□ 0.754e-6■□□□□ 9.9
PRKCB-202ENST00000321728 LAD1O00515 517 aa19.71■□□□□ 0.75
PRKCB-202ENST00000321728 CLSTN1O94985 981 aa19.71■□□□□ 0.75
PRKCB-202ENST00000321728 NF2P35240 595 aa19.71■□□□□ 0.75
PRKCB-202ENST00000321728 ODF2Q5BJF6 829 aa19.71■□□□□ 0.75
PRKCB-202ENST00000321728 OR2W6PQ8NHA6 318 aa19.71■□□□□ 0.75
PRKCB-202ENST00000321728 TMBIM4Q9HC24 238 aa19.71■□□□□ 0.75
PRKCB-202ENST00000321728 ORC4O43929 436 aa19.7■□□□□ 0.74
PRKCB-202ENST00000321728 TNNC1P63316 161 aa19.7■□□□□ 0.74
PRKCB-202ENST00000321728 LETM2Q2VYF4 491 aa19.7■□□□□ 0.74
PRKCB-202ENST00000321728 SLC9C1Q4G0N8 1177 aa19.7■□□□□ 0.74
PRKCB-202ENST00000321728 C6orf89Q6UWU4 347 aa19.7■□□□□ 0.74
PRKCB-202ENST00000321728 LRP5O75197 1615 aa19.7■□□□□ 0.74
PRKCB-202ENST00000321728 SSU72P8A0A1W2PR75 194 aa19.7■□□□□ 0.74
PRKCB-202ENST00000321728 GMNCA6NCL1 334 aa19.7■□□□□ 0.74
PRKCB-202ENST00000321728 M0R2N6 131 aa19.7■□□□□ 0.74
PRKCB-202ENST00000321728 CCNT1O60563 726 aaKnown RBP19.7■□□□□ 0.74
PRKCB-202ENST00000321728 OR52Z1P0C646 297 aa19.7■□□□□ 0.74
PRKCB-202ENST00000321728 PRPHP41219 470 aa19.7■□□□□ 0.74
PRKCB-202ENST00000321728 TECP42680 631 aa19.7■□□□□ 0.74
PRKCB-202ENST00000321728 DRP2Q13474 957 aa19.7■□□□□ 0.74
PRKCB-202ENST00000321728 HGSNATQ68CP4 663 aa19.7■□□□□ 0.74
PRKCB-202ENST00000321728 C1orf131Q8NDD1 294 aaKnown RBP19.7■□□□□ 0.74
PRKCB-202ENST00000321728 AK8Q96MA6 479 aa19.7■□□□□ 0.74
PRKCB-202ENST00000321728 TACO1Q9BSH4 297 aaKnown RBP19.7■□□□□ 0.74
PRKCB-202ENST00000321728 LUC7LQ9NQ29 371 aaKnown RBP19.7■□□□□ 0.74
PRKCB-202ENST00000321728 COL4A1P02462 1669 aa19.7■□□□□ 0.74
PRKCB-202ENST00000321728 NUP98P52948 1817 aa19.7■□□□□ 0.74
PRKCB-202ENST00000321728 GRID2IPA4D2P6 1211 aa19.69■□□□□ 0.74
PRKCB-202ENST00000321728 FGFR1OPO95684 399 aaKnown RBP19.69■□□□□ 0.74
PRKCB-202ENST00000321728 CYP2D6P10635 497 aa19.69■□□□□ 0.74
PRKCB-202ENST00000321728 HSPA9P38646 679 aaKnown RBP19.69■□□□□ 0.74
PRKCB-202ENST00000321728 PREPLQ4J6C6 727 aaPredicted RBP19.69■□□□□ 0.74
PRKCB-202ENST00000321728 ZNF34Q8IZ26 560 aa19.69■□□□□ 0.74
PRKCB-202ENST00000321728 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.69■□□□□ 0.74
PRKCB-202ENST00000321728 TAF1DQ9H5J8 278 aaPredicted RBP19.69■□□□□ 0.74
PRKCB-202ENST00000321728 DDX20Q9UHI6 824 aaKnown RBP19.69■□□□□ 0.74
PRKCB-202ENST00000321728 KLRC1P26715 233 aa19.69■□□□□ 0.74
PRKCB-202ENST00000321728 HSD17B3P37058 310 aa19.69■□□□□ 0.74
PRKCB-202ENST00000321728 SNCBQ16143 134 aa19.69■□□□□ 0.74
PRKCB-202ENST00000321728 ENOX2Q16206 610 aaKnown RBP19.69■□□□□ 0.74
PRKCB-202ENST00000321728 CCDC152Q4G0S7 254 aa19.69■□□□□ 0.74
PRKCB-202ENST00000321728 N4BP2L2Q92802 583 aaPredicted RBP19.69■□□□□ 0.74
PRKCB-202ENST00000321728 ACTR5Q9H9F9 607 aaPredicted RBP19.69■□□□□ 0.74
PRKCB-202ENST00000321728 MCM8Q9UJA3 840 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms