RNA–Protein interactions for RNA: ENST00000318080.6

CRAT-201, Transcript of carnitine O-acetyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRAT, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-201ENST00000318080 SPRED3Q2MJR0 410 aa17.77■□□□□ 0.43
CRAT-201ENST00000318080 SH3GL2Q99962 352 aa17.77■□□□□ 0.43
CRAT-201ENST00000318080 NOC4LQ9BVI4 516 aaKnown RBP17.77■□□□□ 0.43
CRAT-201ENST00000318080 ZNHIT6Q9NWK9 470 aaKnown RBP17.77■□□□□ 0.43
CRAT-201ENST00000318080 ARHGAP20Q9P2F6 1191 aa17.77■□□□□ 0.43
CRAT-201ENST00000318080 PCDHA6Q9UN73 950 aa17.77■□□□□ 0.43
CRAT-201ENST00000318080 PCDHA8Q9Y5H6 950 aa17.77■□□□□ 0.43
CRAT-201ENST00000318080 LAMB2P55268 1798 aa17.77■□□□□ 0.43
CRAT-201ENST00000318080 ZNF804BA4D1E1 1349 aa17.76■□□□□ 0.43
CRAT-201ENST00000318080 TSPY2A6NKD2 308 aa17.76■□□□□ 0.43
CRAT-201ENST00000318080 POLRMTO00411 1230 aaKnown RBP17.76■□□□□ 0.43
CRAT-201ENST00000318080 IRF6O14896 467 aa17.76■□□□□ 0.43
CRAT-201ENST00000318080 PDE4DQ08499 809 aa17.76■□□□□ 0.43
CRAT-201ENST00000318080 KIF5AQ12840 1032 aa17.76■□□□□ 0.43
CRAT-201ENST00000318080 ZKSCAN4Q969J2 545 aaPredicted RBP17.76■□□□□ 0.43
CRAT-201ENST00000318080 NYXQ9GZU5 481 aa17.76■□□□□ 0.43
CRAT-201ENST00000318080 FAM207AQ9NSI2 230 aaPredicted RBP17.76■□□□□ 0.43
CRAT-201ENST00000318080 SNX12Q9UMY4 172 aa17.76■□□□□ 0.43
CRAT-201ENST00000318080 PCDHA4Q9UN74 947 aa17.76■□□□□ 0.43
CRAT-201ENST00000318080 HDLBPQ00341 1268 aaKnown RBP17.76■□□□□ 0.43
CRAT-201ENST00000318080 IFT88Q13099 833 aa17.76■□□□□ 0.43
CRAT-201ENST00000318080 NNTQ13423 1086 aa17.76■□□□□ 0.43
CRAT-201ENST00000318080 KCNB1Q14721 858 aa17.76■□□□□ 0.43
CRAT-201ENST00000318080 GRIPAP1Q4V328 841 aa17.76■□□□□ 0.43
CRAT-201ENST00000318080 C2CD5Q86YS7 1000 aa17.76■□□□□ 0.43
CRAT-201ENST00000318080 IFT81Q8WYA0 676 aa17.76■□□□□ 0.43
CRAT-201ENST00000318080 CABS1Q96KC9 395 aa17.76■□□□□ 0.43
CRAT-201ENST00000318080 FAM84BQ96KN1 310 aaPredicted RBP17.76■□□□□ 0.43
CRAT-201ENST00000318080 NLRP3Q96P20 1036 aa17.76■□□□□ 0.43
CRAT-201ENST00000318080 IL17RBQ9NRM6 502 aa17.76■□□□□ 0.43
CRAT-201ENST00000318080 KIAA0754O94854 1291 aa17.75■□□□□ 0.43
CRAT-201ENST00000318080 PDHBP11177 359 aa17.75■□□□□ 0.43
CRAT-201ENST00000318080 VAV2P52735 878 aa17.75■□□□□ 0.43
CRAT-201ENST00000318080 MECOMQ03112 1051 aa17.75■□□□□ 0.43
CRAT-201ENST00000318080 SLC10A5Q5PT55 438 aa17.75■□□□□ 0.43
CRAT-201ENST00000318080 P2RX5Q93086 422 aa17.75■□□□□ 0.43
CRAT-201ENST00000318080 CCDC42Q96M95 316 aa17.75■□□□□ 0.43
CRAT-201ENST00000318080 PYM1Q9BRP8 204 aaKnown RBP17.75■□□□□ 0.43
CRAT-201ENST00000318080 CACNA1SQ13698 1873 aa17.75■□□□□ 0.43
CRAT-201ENST00000318080 CCDC194A0A1B0GVG4 234 aa17.75■□□□□ 0.43
CRAT-201ENST00000318080 M0R2N6 131 aa17.75■□□□□ 0.43
CRAT-201ENST00000318080 IPO7O95373 1038 aaKnown RBP17.75■□□□□ 0.43
CRAT-201ENST00000318080 USP17L8P0C7I0 530 aa17.75■□□□□ 0.43
CRAT-201ENST00000318080 SF3B3Q15393 1217 aaKnown RBP17.75■□□□□ 0.43
CRAT-201ENST00000318080 ZNF662Q6ZS27 426 aa17.75■□□□□ 0.43
CRAT-201ENST00000318080 SPATA4Q8NEY3 305 aa17.75■□□□□ 0.43
CRAT-201ENST00000318080 DYNLL2Q96FJ2 89 aa17.75■□□□□ 0.43
CRAT-201ENST00000318080 CYTH3O43739 400 aa17.74■□□□□ 0.43
CRAT-201ENST00000318080 MCM3P25205 808 aa17.74■□□□□ 0.43
CRAT-201ENST00000318080 PRDX5P30044 214 aa17.74■□□□□ 0.43
CRAT-201ENST00000318080 PDE6BP35913 854 aa17.74■□□□□ 0.43
CRAT-201ENST00000318080 CEP57Q86XR8 500 aa17.74■□□□□ 0.43
CRAT-201ENST00000318080 EHBP1Q8NDI1 1231 aa17.74■□□□□ 0.43
CRAT-201ENST00000318080 RNF217Q8TC41 542 aa17.74■□□□□ 0.43
CRAT-201ENST00000318080 NSUN4Q96CB9 384 aaKnown RBP17.74■□□□□ 0.43
CRAT-201ENST00000318080 RUFY1Q96T51 708 aa17.74■□□□□ 0.43
CRAT-201ENST00000318080 PCDHA13Q9Y5I0 950 aa17.74■□□□□ 0.43
CRAT-201ENST00000318080 MYH10P35580 1976 aa17.74■□□□□ 0.43
CRAT-201ENST00000318080 GOLGA8HP0CJ92 632 aa17.74■□□□□ 0.43
CRAT-201ENST00000318080 EIF4A3P38919 411 aaKnown RBP17.74■□□□□ 0.43
CRAT-201ENST00000318080 SLC15A2Q16348 729 aa17.74■□□□□ 0.43
CRAT-201ENST00000318080 HEATR3Q7Z4Q2 680 aa17.74■□□□□ 0.43
CRAT-201ENST00000318080 CCDC155Q8N6L0 562 aa17.74■□□□□ 0.43
CRAT-201ENST00000318080 RPGRIP1Q96KN7 1286 aa17.74■□□□□ 0.43
CRAT-201ENST00000318080 CCDC43Q96MW1 224 aaKnown RBP17.74■□□□□ 0.43
CRAT-201ENST00000318080 IFIH1Q9BYX4 1025 aaKnown RBP17.74■□□□□ 0.43
CRAT-201ENST00000318080 SEMA6BQ9H3T3 888 aa17.74■□□□□ 0.43
CRAT-201ENST00000318080 SLC39A2Q9NP94 309 aa17.74■□□□□ 0.43
CRAT-201ENST00000318080 FLT1P17948 1338 aa17.74■□□□□ 0.43
CRAT-201ENST00000318080 ANO9A1A5B4 782 aa17.74■□□□□ 0.43
CRAT-201ENST00000318080 USP17L3A6NCW0 530 aa17.74■□□□□ 0.43
CRAT-201ENST00000318080 USP17L4A6NCW7 530 aa17.74■□□□□ 0.43
CRAT-201ENST00000318080 MMP10P09238 476 aa17.74■□□□□ 0.43
CRAT-201ENST00000318080 CCNE1P24864 410 aa17.74■□□□□ 0.43
CRAT-201ENST00000318080 HPDP32754 393 aaPredicted RBP17.74■□□□□ 0.43
CRAT-201ENST00000318080 ASIC1P78348 528 aa17.74■□□□□ 0.43
CRAT-201ENST00000318080 USP17L1Q7RTZ2 530 aa17.74■□□□□ 0.43
CRAT-201ENST00000318080 TMC4Q7Z404 712 aa17.74■□□□□ 0.43
CRAT-201ENST00000318080 POTEDQ86YR6 584 aa17.74■□□□□ 0.43
CRAT-201ENST00000318080 CCDC170Q8IYT3 715 aa17.74■□□□□ 0.43
CRAT-201ENST00000318080 TRIM9Q9C026 710 aa17.74■□□□□ 0.43
CRAT-201ENST00000318080 MEFVO15553 781 aaPredicted RBP17.73■□□□□ 0.43
CRAT-201ENST00000318080 CARSP49589 748 aaKnown RBP17.73■□□□□ 0.43
CRAT-201ENST00000318080 TFAP4Q01664 338 aa17.73■□□□□ 0.43
CRAT-201ENST00000318080 E2F5Q15329 346 aa17.73■□□□□ 0.43
CRAT-201ENST00000318080 NAA35Q5VZE5 725 aa17.73■□□□□ 0.43
CRAT-201ENST00000318080 KIAA0895Q8NCT3 520 aa17.73■□□□□ 0.43
CRAT-201ENST00000318080 OSBPL9Q96SU4 736 aa17.73■□□□□ 0.43
CRAT-201ENST00000318080 NFU1Q9UMS0 254 aa17.73■□□□□ 0.43
CRAT-201ENST00000318080 ORC4O43929 436 aa17.73■□□□□ 0.43
CRAT-201ENST00000318080 SF3B2Q13435 895 aaKnown RBP17.73■□□□□ 0.43
CRAT-201ENST00000318080 N4BP2L2Q92802 583 aaPredicted RBP17.73■□□□□ 0.43
CRAT-201ENST00000318080 SH2D4AQ9H788 454 aa17.73■□□□□ 0.43
CRAT-201ENST00000318080 PPANQ9NQ55 473 aaKnown RBP17.73■□□□□ 0.43
CRAT-201ENST00000318080 CALML3P27482 149 aa17.72■□□□□ 0.43
CRAT-201ENST00000318080 LSP1P33241 339 aa17.72■□□□□ 0.43
CRAT-201ENST00000318080 KIF11P52732 1056 aa17.72■□□□□ 0.43
CRAT-201ENST00000318080 SPA17Q15506 151 aa17.72■□□□□ 0.43
CRAT-201ENST00000318080 CHADLQ6NUI6 762 aa17.72■□□□□ 0.43
CRAT-201ENST00000318080 CABP7Q86V35 215 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms