RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 SEPT14Q6ZU15 432 aa17.47■□□□□ 0.39
PDLIM5-202ENST00000318007 GABRQQ9UN88 632 aa17.47■□□□□ 0.39
PDLIM5-202ENST00000318007 DDX39AO00148 427 aaKnown RBP17.46■□□□□ 0.39
PDLIM5-202ENST00000318007 GPR25O00155 361 aa17.46■□□□□ 0.39
PDLIM5-202ENST00000318007 STRNO43815 780 aa17.46■□□□□ 0.39
PDLIM5-202ENST00000318007 ARP10275 920 aa17.46■□□□□ 0.39
PDLIM5-202ENST00000318007 CCND2P30279 289 aa17.46■□□□□ 0.39
PDLIM5-202ENST00000318007 NASPP49321 788 aaPredicted RBP17.46■□□□□ 0.39
PDLIM5-202ENST00000318007 FCGRTP55899 365 aa17.46■□□□□ 0.39
PDLIM5-202ENST00000318007 PDE4DQ08499 809 aa17.46■□□□□ 0.39
PDLIM5-202ENST00000318007 CALCRLQ16602 461 aa17.46■□□□□ 0.39
PDLIM5-202ENST00000318007 PCNX4Q63HM2 1172 aa17.46■□□□□ 0.39
PDLIM5-202ENST00000318007 FBXO16Q8IX29 292 aaPredicted RBP17.46■□□□□ 0.39
PDLIM5-202ENST00000318007 SCAND2PQ9GZW5 306 aaPredicted RBP17.46■□□□□ 0.39
PDLIM5-202ENST00000318007 ADD3Q9UEY8 706 aaKnown RBP17.46■□□□□ 0.39
PDLIM5-202ENST00000318007 DNAH12Q6ZR08 3092 aa17.46■□□□□ 0.39
PDLIM5-202ENST00000318007 MCM3APO60318 1980 aa17.46■□□□□ 0.39
PDLIM5-202ENST00000318007 CDC25AP30304 524 aa17.46■□□□□ 0.39
PDLIM5-202ENST00000318007 USP11P51784 963 aa17.46■□□□□ 0.39
PDLIM5-202ENST00000318007 PRKCZQ05513 592 aa17.46■□□□□ 0.39
PDLIM5-202ENST00000318007 SLC39A14Q15043 492 aa17.46■□□□□ 0.39
PDLIM5-202ENST00000318007 CEP55Q53EZ4 464 aa17.46■□□□□ 0.39
PDLIM5-202ENST00000318007 MCTP2Q6DN12 878 aa17.46■□□□□ 0.39
PDLIM5-202ENST00000318007 PLA2G4DQ86XP0 818 aa17.46■□□□□ 0.39
PDLIM5-202ENST00000318007 ZNF296Q8WUU4 475 aaPredicted RBP17.46■□□□□ 0.39
PDLIM5-202ENST00000318007 PTGS1P23219 599 aa17.45■□□□□ 0.38
PDLIM5-202ENST00000318007 MAP2K1Q02750 393 aaPredicted RBP17.45■□□□□ 0.38
PDLIM5-202ENST00000318007 MTMR1Q13613 665 aa17.45■□□□□ 0.38
PDLIM5-202ENST00000318007 NFKBIBQ15653 356 aa17.45■□□□□ 0.38
PDLIM5-202ENST00000318007 ZNF792Q3KQV3 632 aa17.45■□□□□ 0.38
PDLIM5-202ENST00000318007 DNAJC5GQ8N7S2 189 aa17.45■□□□□ 0.38
PDLIM5-202ENST00000318007 DNERQ8NFT8 737 aa17.45■□□□□ 0.38
PDLIM5-202ENST00000318007 LENG9Q96B70 501 aa17.45■□□□□ 0.38
PDLIM5-202ENST00000318007 NUDT12Q9BQG2 462 aa17.45■□□□□ 0.38
PDLIM5-202ENST00000318007 PLXNA1Q9UIW2 1896 aa17.45■□□□□ 0.38
PDLIM5-202ENST00000318007 PCDHA7Q9UN72 937 aa17.45■□□□□ 0.38
PDLIM5-202ENST00000318007 CEP131Q9UPN4 1083 aa17.45■□□□□ 0.38
PDLIM5-202ENST00000318007 IGLV3-22A0A075B6J6 115 aa17.44■□□□□ 0.38
PDLIM5-202ENST00000318007 CHMP2AO43633 222 aa17.44■□□□□ 0.38
PDLIM5-202ENST00000318007 OR52Z1P0C646 297 aa17.44■□□□□ 0.38
PDLIM5-202ENST00000318007 MCM4P33991 863 aa17.44■□□□□ 0.38
PDLIM5-202ENST00000318007 TECP42680 631 aa17.44■□□□□ 0.38
PDLIM5-202ENST00000318007 SP4Q02446 784 aa17.44■□□□□ 0.38
PDLIM5-202ENST00000318007 KIF22Q14807 665 aa17.44■□□□□ 0.38
PDLIM5-202ENST00000318007 IL17AQ16552 155 aa17.44■□□□□ 0.38
PDLIM5-202ENST00000318007 MORN1Q5T089 497 aa17.44■□□□□ 0.38
PDLIM5-202ENST00000318007 PPP4R3AQ6IN85 833 aa17.44■□□□□ 0.38
PDLIM5-202ENST00000318007 VSIG10LQ86VR7 867 aa17.44■□□□□ 0.38
PDLIM5-202ENST00000318007 MAML3Q96JK9 1138 aa17.44■□□□□ 0.38
PDLIM5-202ENST00000318007 MXRA8Q9BRK3 442 aa17.44■□□□□ 0.38
PDLIM5-202ENST00000318007 FLRT1Q9NZU1 646 aa17.44■□□□□ 0.38
PDLIM5-202ENST00000318007 FRMPD4Q14CM0 1322 aa17.44■□□□□ 0.38
PDLIM5-202ENST00000318007 SLC15A5A6NIM6 579 aa17.44■□□□□ 0.38
PDLIM5-202ENST00000318007 PP2D1A8MPX8 630 aa17.44■□□□□ 0.38
PDLIM5-202ENST00000318007 GOLGA6L22H0YM25 854 aa17.44■□□□□ 0.38
PDLIM5-202ENST00000318007 MSH4O15457 936 aa17.44■□□□□ 0.38
PDLIM5-202ENST00000318007 RGS20O76081 388 aa17.44■□□□□ 0.38
PDLIM5-202ENST00000318007 YEATS4O95619 227 aa17.44■□□□□ 0.38
PDLIM5-202ENST00000318007 ATP2C1P98194 919 aaPredicted RBP17.44■□□□□ 0.38
PDLIM5-202ENST00000318007 MAP2K5Q13163 448 aa17.44■□□□□ 0.38
PDLIM5-202ENST00000318007 ZRSR1Q15695 479 aaKnown RBP17.44■□□□□ 0.38
PDLIM5-202ENST00000318007 STXBP2Q15833 593 aa17.44■□□□□ 0.38
PDLIM5-202ENST00000318007 ARMCX2Q7L311 632 aa17.44■□□□□ 0.38
PDLIM5-202ENST00000318007 SAMD3Q8N6K7 520 aa17.44■□□□□ 0.38
PDLIM5-202ENST00000318007 C4orf32Q8N8J7 132 aa17.44■□□□□ 0.38
PDLIM5-202ENST00000318007 KCNH7Q9NS40 1196 aa17.44■□□□□ 0.38
PDLIM5-202ENST00000318007 MGAMO43451 1857 aa17.44■□□□□ 0.38
PDLIM5-202ENST00000318007 GOLGA6L4A6NEF3 574 aa17.43■□□□□ 0.38
PDLIM5-202ENST00000318007 POTEMA6NI47 508 aa17.43■□□□□ 0.38
PDLIM5-202ENST00000318007 CYP3A4P08684 503 aa17.43■□□□□ 0.38
PDLIM5-202ENST00000318007 CYP2C19P33261 490 aa17.43■□□□□ 0.38
PDLIM5-202ENST00000318007 FLT3LGP49771 235 aa17.43■□□□□ 0.38
PDLIM5-202ENST00000318007 PRAMEF19Q5SWL8 479 aa17.43■□□□□ 0.38
PDLIM5-202ENST00000318007 TMEM63BQ5T3F8 832 aa17.43■□□□□ 0.38
PDLIM5-202ENST00000318007 ABRAQ8N0Z2 381 aa17.43■□□□□ 0.38
PDLIM5-202ENST00000318007 KCNG4Q8TDN1 519 aa17.43■□□□□ 0.38
PDLIM5-202ENST00000318007 HAS1Q92839 578 aa17.43■□□□□ 0.38
PDLIM5-202ENST00000318007 ZNF577Q9BSK1 485 aa17.43■□□□□ 0.38
PDLIM5-202ENST00000318007 BCAS3Q9H6U6 928 aa17.43■□□□□ 0.38
PDLIM5-202ENST00000318007 RCOR1Q9UKL0 485 aa17.43■□□□□ 0.38
PDLIM5-202ENST00000318007 ATL3Q6DD88 541 aa17.42■□□□□ 0.38
PDLIM5-202ENST00000318007 CSRNP2Q9H175 543 aa17.42■□□□□ 0.38
PDLIM5-202ENST00000318007 TTC12Q9H892 705 aaPredicted RBP17.42■□□□□ 0.38
PDLIM5-202ENST00000318007 PDGFCQ9NRA1 345 aa17.42■□□□□ 0.38
PDLIM5-202ENST00000318007 FBXO2Q9UK22 296 aaPredicted RBP17.42■□□□□ 0.38
PDLIM5-202ENST00000318007 ATP9AO75110 1047 aa17.42■□□□□ 0.38
PDLIM5-202ENST00000318007 GCFC2P16383 781 aaKnown RBP17.42■□□□□ 0.38
PDLIM5-202ENST00000318007 CIITAP33076 1130 aa17.42■□□□□ 0.38
PDLIM5-202ENST00000318007 CLEC17AQ6ZS10 378 aa17.42■□□□□ 0.38
PDLIM5-202ENST00000318007 USP49Q70CQ1 688 aa17.42■□□□□ 0.38
PDLIM5-202ENST00000318007 KRI1Q8N9T8 703 aaKnown RBP17.42■□□□□ 0.38
PDLIM5-202ENST00000318007 LMBRD1Q9NUN5 540 aa17.42■□□□□ 0.38
PDLIM5-202ENST00000318007 GJD2Q9UKL4 321 aa17.42■□□□□ 0.38
PDLIM5-202ENST00000318007 CYP3A7-CYP3A51PA0A087WV96 503 aa17.41■□□□□ 0.38
PDLIM5-202ENST00000318007 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.41■□□□□ 0.38
PDLIM5-202ENST00000318007 MEIS1O00470 390 aa17.41■□□□□ 0.38
PDLIM5-202ENST00000318007 CYP3A7P24462 503 aa17.41■□□□□ 0.38
PDLIM5-202ENST00000318007 RGS2P41220 211 aa17.41■□□□□ 0.38
PDLIM5-202ENST00000318007 Q4G0T1 1027 aa17.41■□□□□ 0.38
PDLIM5-202ENST00000318007 DTHD1Q6ZMT9 781 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms