RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 CHADLQ6NUI6 762 aa14.63□□□□□ -0.07
CPNE1-201ENST00000317677 DTHD1Q6ZMT9 781 aa14.63□□□□□ -0.07
CPNE1-201ENST00000317677 DPF2Q92785 391 aa14.63□□□□□ -0.07
CPNE1-201ENST00000317677 MED15Q96RN5 788 aa14.63□□□□□ -0.07
CPNE1-201ENST00000317677 NAT10Q9H0A0 1025 aaKnown RBP14.63□□□□□ -0.07
CPNE1-201ENST00000317677 MED4Q9NPJ6 270 aa14.63□□□□□ -0.07
CPNE1-201ENST00000317677 CNOT7Q9UIV1 285 aaKnown RBP14.63□□□□□ -0.07
CPNE1-201ENST00000317677 USP17L15C9J2P7 530 aa14.62□□□□□ -0.07
CPNE1-201ENST00000317677 USP17L13C9JLJ4 530 aa14.62□□□□□ -0.07
CPNE1-201ENST00000317677 USP17L11C9JVI0 530 aa14.62□□□□□ -0.07
CPNE1-201ENST00000317677 USP17L18D6R9N7 530 aa14.62□□□□□ -0.07
CPNE1-201ENST00000317677 USP17L22D6RA61 530 aa14.62□□□□□ -0.07
CPNE1-201ENST00000317677 USP17L17D6RBQ6 530 aa14.62□□□□□ -0.07
CPNE1-201ENST00000317677 USP17L19D6RCP7 530 aa14.62□□□□□ -0.07
CPNE1-201ENST00000317677 USP17L20D6RJB6 530 aa14.62□□□□□ -0.07
CPNE1-201ENST00000317677 LAD1O00515 517 aa14.62□□□□□ -0.07
CPNE1-201ENST00000317677 OPLAHO14841 1288 aa14.62□□□□□ -0.07
CPNE1-201ENST00000317677 TBC1D8O95759 1140 aa14.62□□□□□ -0.07
CPNE1-201ENST00000317677 USP17L24Q0WX57 530 aa14.62□□□□□ -0.07
CPNE1-201ENST00000317677 KANK3Q6NY19 840 aa14.62□□□□□ -0.07
CPNE1-201ENST00000317677 USP17L6PQ6QN14 398 aa14.62□□□□□ -0.07
CPNE1-201ENST00000317677 MSL3Q8N5Y2 521 aaKnown RBP14.62□□□□□ -0.07
CPNE1-201ENST00000317677 CUL5Q93034 780 aa14.62□□□□□ -0.07
CPNE1-201ENST00000317677 MTMR9Q96QG7 549 aa14.62□□□□□ -0.07
CPNE1-201ENST00000317677 TAF1DQ9H5J8 278 aaPredicted RBP14.62□□□□□ -0.07
CPNE1-201ENST00000317677 PSTPIP2Q9H939 334 aa14.62□□□□□ -0.07
CPNE1-201ENST00000317677 ARHGEF10LQ9HCE6 1279 aa14.62□□□□□ -0.07
CPNE1-201ENST00000317677 ADAM21Q9UKJ8 722 aa14.62□□□□□ -0.07
CPNE1-201ENST00000317677 PRR12Q9ULL5 1215 aa14.62□□□□□ -0.07
CPNE1-201ENST00000317677 PCDHA1Q9Y5I3 950 aa14.62□□□□□ -0.07
CPNE1-201ENST00000317677 EFCAB8A8MWE9 144 aa14.62□□□□□ -0.07
CPNE1-201ENST00000317677 MEIS2O14770 477 aa14.62□□□□□ -0.07
CPNE1-201ENST00000317677 TNNI2P48788 182 aa14.62□□□□□ -0.07
CPNE1-201ENST00000317677 ZRSR1Q15695 479 aaKnown RBP14.62□□□□□ -0.07
CPNE1-201ENST00000317677 FAM83BQ5T0W9 1011 aa14.62□□□□□ -0.07
CPNE1-201ENST00000317677 PNMA8AQ86V59 439 aaPredicted RBP14.62□□□□□ -0.07
CPNE1-201ENST00000317677 IMPACTQ9P2X3 320 aa14.62□□□□□ -0.07
CPNE1-201ENST00000317677 EPHX2P34913 555 aa14.61□□□□□ -0.07
CPNE1-201ENST00000317677 FMR1Q06787 632 aaKnown RBP eCLIP14.61□□□□□ -0.077e-7■■■□□ 18.6
CPNE1-201ENST00000317677 LDHDQ86WU2 507 aa14.61□□□□□ -0.07
CPNE1-201ENST00000317677 DHX37Q8IY37 1157 aaKnown RBP14.61□□□□□ -0.07
CPNE1-201ENST00000317677 MMTAG2Q9BU76 263 aaKnown RBP14.61□□□□□ -0.07
CPNE1-201ENST00000317677 CCSER1Q9C0I3 900 aa14.61□□□□□ -0.07
CPNE1-201ENST00000317677 CXorf56Q9H5V9 222 aa14.61□□□□□ -0.07
CPNE1-201ENST00000317677 VCPKMTQ9H867 229 aa14.61□□□□□ -0.07
CPNE1-201ENST00000317677 KCNG1Q9UIX4 513 aa14.61□□□□□ -0.07
CPNE1-201ENST00000317677 HOOK1Q9UJC3 728 aaKnown RBP14.61□□□□□ -0.07
CPNE1-201ENST00000317677 IKBKBO14920 756 aa14.6□□□□□ -0.07
CPNE1-201ENST00000317677 MRPL12P52815 198 aaKnown RBP14.6□□□□□ -0.07
CPNE1-201ENST00000317677 CORO7P57737 925 aa14.6□□□□□ -0.07
CPNE1-201ENST00000317677 ORC2Q13416 577 aaPredicted RBP14.6□□□□□ -0.07
CPNE1-201ENST00000317677 ZYXQ15942 572 aaKnown RBP14.6□□□□□ -0.07
CPNE1-201ENST00000317677 EAPPQ56P03 285 aaPredicted RBP14.6□□□□□ -0.07
CPNE1-201ENST00000317677 MCTP2Q6DN12 878 aa14.6□□□□□ -0.07
CPNE1-201ENST00000317677 BLZF1Q9H2G9 400 aa14.6□□□□□ -0.07
CPNE1-201ENST00000317677 DISC1Q9NRI5 854 aa14.6□□□□□ -0.07
CPNE1-201ENST00000317677 PHLPP2Q6ZVD8 1323 aa14.6□□□□□ -0.07
CPNE1-201ENST00000317677 TADA3O75528 432 aa14.6□□□□□ -0.07
CPNE1-201ENST00000317677 CD44P16070 742 aaKnown RBP14.6□□□□□ -0.07
CPNE1-201ENST00000317677 SATB1Q01826 763 aa14.6□□□□□ -0.07
CPNE1-201ENST00000317677 CUL4BQ13620 913 aa14.6□□□□□ -0.07
CPNE1-201ENST00000317677 KIF4BQ2VIQ3 1234 aa14.6□□□□□ -0.07
CPNE1-201ENST00000317677 USH1GQ495M9 461 aa14.6□□□□□ -0.07
CPNE1-201ENST00000317677 FBXO11Q86XK2 927 aa14.6□□□□□ -0.07
CPNE1-201ENST00000317677 CRYGNQ8WXF5 182 aa14.6□□□□□ -0.07
CPNE1-201ENST00000317677 DRC1Q96MC2 740 aa14.6□□□□□ -0.07
CPNE1-201ENST00000317677 PLIN2Q99541 437 aa14.6□□□□□ -0.07
CPNE1-201ENST00000317677 AMNQ9BXJ7 453 aa14.6□□□□□ -0.07
CPNE1-201ENST00000317677 ZCCHC17Q9NP64 241 aaKnown RBP14.6□□□□□ -0.07
CPNE1-201ENST00000317677 CLEC11AQ9Y240 323 aa14.6□□□□□ -0.07
CPNE1-201ENST00000317677 DOCK1Q14185 1865 aa14.59□□□□□ -0.07
CPNE1-201ENST00000317677 ATP1A3P13637 1013 aa14.59□□□□□ -0.07
CPNE1-201ENST00000317677 TECP42680 631 aa14.59□□□□□ -0.07
CPNE1-201ENST00000317677 IKQ13123 557 aaPredicted RBP14.59□□□□□ -0.07
CPNE1-201ENST00000317677 NBPF12Q5TAG4 269 aaPredicted RBP14.59□□□□□ -0.07
CPNE1-201ENST00000317677 CC2D1AQ6P1N0 951 aaPredicted RBP14.59□□□□□ -0.07
CPNE1-201ENST00000317677 LEKR1Q6ZMV7 388 aa14.59□□□□□ -0.07
CPNE1-201ENST00000317677 MMS22LQ6ZRQ5 1243 aa14.59□□□□□ -0.07
CPNE1-201ENST00000317677 IGSF22Q8N9C0 903 aa14.59□□□□□ -0.07
CPNE1-201ENST00000317677 TRIML1Q8N9V2 468 aa14.59□□□□□ -0.07
CPNE1-201ENST00000317677 TRPM4Q8TD43 1214 aa14.59□□□□□ -0.07
CPNE1-201ENST00000317677 TRMT1Q9NXH9 659 aaKnown RBP14.59□□□□□ -0.07
CPNE1-201ENST00000317677 EIF3CLB5ME19 914 aaKnown RBP14.58□□□□□ -0.07
CPNE1-201ENST00000317677 CCP110O43303 1012 aa14.58□□□□□ -0.07
CPNE1-201ENST00000317677 SASH3O75995 380 aa14.58□□□□□ -0.07
CPNE1-201ENST00000317677 STAT2P52630 851 aa14.58□□□□□ -0.07
CPNE1-201ENST00000317677 MYL5Q02045 173 aa14.58□□□□□ -0.07
CPNE1-201ENST00000317677 DGKZQ13574 1117 aa14.58□□□□□ -0.07
CPNE1-201ENST00000317677 PPP4R3AQ6IN85 833 aa14.58□□□□□ -0.07
CPNE1-201ENST00000317677 GPR161Q8N6U8 529 aaKnown RBP14.58□□□□□ -0.07
CPNE1-201ENST00000317677 HAS1Q92839 578 aa14.58□□□□□ -0.07
CPNE1-201ENST00000317677 GJA10Q969M2 543 aa14.58□□□□□ -0.07
CPNE1-201ENST00000317677 EIF3CQ99613 913 aaKnown RBP14.58□□□□□ -0.07
CPNE1-201ENST00000317677 ANO3Q9BYT9 981 aa14.58□□□□□ -0.07
CPNE1-201ENST00000317677 DEFB129Q9H1M3 183 aa14.58□□□□□ -0.07
CPNE1-201ENST00000317677 GOPCQ9HD26 462 aa14.58□□□□□ -0.07
CPNE1-201ENST00000317677 FBXO28Q9NVF7 368 aa14.58□□□□□ -0.07
CPNE1-201ENST00000317677 GTPBP6O43824 516 aaPredicted RBP14.58□□□□□ -0.08
CPNE1-201ENST00000317677 ASNSP08243 561 aa14.58□□□□□ -0.08
CPNE1-201ENST00000317677 STAT6P42226 847 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms