RNA–Protein interactions for RNA: ENST00000316534.8

NPHP1-201, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 3,756 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-201ENST00000316534 PTGS1P23219 599 aa8.07□□□□□ -1.12
NPHP1-201ENST00000316534 RPA1P27694 616 aa8.07□□□□□ -1.12
NPHP1-201ENST00000316534 INPP5BP32019 993 aa8.07□□□□□ -1.12
NPHP1-201ENST00000316534 USP14P54578 494 aa8.07□□□□□ -1.12
NPHP1-201ENST00000316534 KIAA0895Q8NCT3 520 aa8.07□□□□□ -1.12
NPHP1-201ENST00000316534 SENP7Q9BQF6 1050 aa8.07□□□□□ -1.12
NPHP1-201ENST00000316534 RAB34Q9BZG1 259 aa8.07□□□□□ -1.12
NPHP1-201ENST00000316534 NT5C3AQ9H0P0 336 aa8.07□□□□□ -1.12
NPHP1-201ENST00000316534 VAT1LQ9HCJ6 419 aa8.07□□□□□ -1.12
NPHP1-201ENST00000316534 PPP1R9AQ9ULJ8 1098 aa8.07□□□□□ -1.12
NPHP1-201ENST00000316534 UBIAD1Q9Y5Z9 338 aa8.07□□□□□ -1.12
NPHP1-201ENST00000316534 PFASO15067 1338 aa8.06□□□□□ -1.12
NPHP1-201ENST00000316534 USP17L15C9J2P7 530 aa8.06□□□□□ -1.12
NPHP1-201ENST00000316534 USP17L13C9JLJ4 530 aa8.06□□□□□ -1.12
NPHP1-201ENST00000316534 USP17L11C9JVI0 530 aa8.06□□□□□ -1.12
NPHP1-201ENST00000316534 USP17L18D6R9N7 530 aa8.06□□□□□ -1.12
NPHP1-201ENST00000316534 USP17L22D6RA61 530 aa8.06□□□□□ -1.12
NPHP1-201ENST00000316534 USP17L17D6RBQ6 530 aa8.06□□□□□ -1.12
NPHP1-201ENST00000316534 USP17L19D6RCP7 530 aa8.06□□□□□ -1.12
NPHP1-201ENST00000316534 USP17L20D6RJB6 530 aa8.06□□□□□ -1.12
NPHP1-201ENST00000316534 H7C1D1 291 aa8.06□□□□□ -1.12
NPHP1-201ENST00000316534 BIN1O00499 593 aa8.06□□□□□ -1.12
NPHP1-201ENST00000316534 MSH4O15457 936 aa8.06□□□□□ -1.12
NPHP1-201ENST00000316534 PTPRAP18433 802 aa8.06□□□□□ -1.12
NPHP1-201ENST00000316534 TECP42680 631 aa8.06□□□□□ -1.12
NPHP1-201ENST00000316534 PRCPP42785 496 aa8.06□□□□□ -1.12
NPHP1-201ENST00000316534 USP17L24Q0WX57 530 aa8.06□□□□□ -1.12
NPHP1-201ENST00000316534 DCAF15Q66K64 600 aa8.06□□□□□ -1.12
NPHP1-201ENST00000316534 XRRA1Q6P2D8 792 aa8.06□□□□□ -1.12
NPHP1-201ENST00000316534 USP17L6PQ6QN14 398 aa8.06□□□□□ -1.12
NPHP1-201ENST00000316534 HSD17B14Q9BPX1 270 aa8.06□□□□□ -1.12
NPHP1-201ENST00000316534 STRA6Q9BX79 667 aa8.06□□□□□ -1.12
NPHP1-201ENST00000316534 TRIM5Q9C035 493 aa8.06□□□□□ -1.12
NPHP1-201ENST00000316534 A0A1W2PQC6 194 aa8.06□□□□□ -1.12
NPHP1-201ENST00000316534 MYMKA6NI61 221 aa8.06□□□□□ -1.12
NPHP1-201ENST00000316534 BECN2A8MW95 431 aa8.06□□□□□ -1.12
NPHP1-201ENST00000316534 C19orf81C9J6K1 198 aa8.06□□□□□ -1.12
NPHP1-201ENST00000316534 LYPLA2O95372 231 aa8.06□□□□□ -1.12
NPHP1-201ENST00000316534 SETQ01105 290 aaPredicted RBP8.06□□□□□ -1.12
NPHP1-201ENST00000316534 TMEM266Q2M3C6 531 aa8.06□□□□□ -1.12
NPHP1-201ENST00000316534 CCDC186Q7Z3E2 898 aa8.06□□□□□ -1.12
NPHP1-201ENST00000316534 KCNK18Q7Z418 384 aa8.06□□□□□ -1.12
NPHP1-201ENST00000316534 PRPF38AQ8NAV1 312 aaKnown RBP8.06□□□□□ -1.12
NPHP1-201ENST00000316534 TRPM4Q8TD43 1214 aa8.06□□□□□ -1.12
NPHP1-201ENST00000316534 SLF1Q9BQI6 1058 aa8.06□□□□□ -1.12
NPHP1-201ENST00000316534 TTC12Q9H892 705 aaPredicted RBP8.06□□□□□ -1.12
NPHP1-201ENST00000316534 TUFT1Q9NNX1 390 aa8.06□□□□□ -1.12
NPHP1-201ENST00000316534 IFNKQ9P0W0 207 aa8.06□□□□□ -1.12
NPHP1-201ENST00000316534 LRWD1Q9UFC0 647 aa8.06□□□□□ -1.12
NPHP1-201ENST00000316534 NFE2L3Q9Y4A8 694 aa8.06□□□□□ -1.12
NPHP1-201ENST00000316534 PLXNA1Q9UIW2 1896 aa8.06□□□□□ -1.12
NPHP1-201ENST00000316534 PSDA5PKW4 1024 aaPredicted RBP8.06□□□□□ -1.12
NPHP1-201ENST00000316534 UBA7P41226 1012 aa8.06□□□□□ -1.12
NPHP1-201ENST00000316534 AMPD3Q01432 767 aa8.06□□□□□ -1.12
NPHP1-201ENST00000316534 PCNX4Q63HM2 1172 aa8.06□□□□□ -1.12
NPHP1-201ENST00000316534 OTOP1Q7RTM1 612 aa8.06□□□□□ -1.12
NPHP1-201ENST00000316534 GUF1Q8N442 669 aaKnown RBP8.06□□□□□ -1.12
NPHP1-201ENST00000316534 LARP4BQ92615 738 aaKnown RBP8.06□□□□□ -1.12
NPHP1-201ENST00000316534 CTAGE1Q96RT6 745 aa8.06□□□□□ -1.12
NPHP1-201ENST00000316534 TTYH3Q9C0H2 523 aa8.06□□□□□ -1.12
NPHP1-201ENST00000316534 MYH11P35749 1972 aa8.05□□□□□ -1.12
NPHP1-201ENST00000316534 DHX15O43143 795 aaKnown RBP8.05□□□□□ -1.12
NPHP1-201ENST00000316534 EEF1GP26641 437 aaKnown RBP8.05□□□□□ -1.12
NPHP1-201ENST00000316534 CASP1P29466 404 aa8.05□□□□□ -1.12
NPHP1-201ENST00000316534 BACE1P56817 501 aa8.05□□□□□ -1.12
NPHP1-201ENST00000316534 PAK1Q13153 545 aa8.05□□□□□ -1.12
NPHP1-201ENST00000316534 TKFCQ3LXA3 575 aa8.05□□□□□ -1.12
NPHP1-201ENST00000316534 ARSHQ5FYA8 562 aa8.05□□□□□ -1.12
NPHP1-201ENST00000316534 ARHGAP27Q6ZUM4 889 aa8.05□□□□□ -1.12
NPHP1-201ENST00000316534 SYT2Q8N9I0 419 aaPredicted RBP8.05□□□□□ -1.12
NPHP1-201ENST00000316534 PLXNB2O15031 1838 aa8.05□□□□□ -1.12
NPHP1-201ENST00000316534 CTIFO43310 598 aaKnown RBP8.05□□□□□ -1.12
NPHP1-201ENST00000316534 VCAM1P19320 739 aa8.05□□□□□ -1.12
NPHP1-201ENST00000316534 CCNE1P24864 410 aa8.05□□□□□ -1.12
NPHP1-201ENST00000316534 NOLC1Q14978 699 aaKnown RBP eCLIP8.05□□□□□ -1.12
NPHP1-201ENST00000316534 TCP11X2Q5H9J9 407 aa8.05□□□□□ -1.12
NPHP1-201ENST00000316534 FIGNQ5HY92 759 aa8.05□□□□□ -1.12
NPHP1-201ENST00000316534 LDHDQ86WU2 507 aa8.05□□□□□ -1.12
NPHP1-201ENST00000316534 PDILTQ8N807 584 aa8.05□□□□□ -1.12
NPHP1-201ENST00000316534 PANX2Q96RD6 677 aa8.05□□□□□ -1.12
NPHP1-201ENST00000316534 SAMSN1Q9NSI8 373 aaKnown RBP8.05□□□□□ -1.12
NPHP1-201ENST00000316534 TRPM7Q96QT4 1865 aa8.05□□□□□ -1.12
NPHP1-201ENST00000316534 USP2O75604 605 aaPredicted RBP8.05□□□□□ -1.12
NPHP1-201ENST00000316534 ZNF131P52739 623 aa8.05□□□□□ -1.12
NPHP1-201ENST00000316534 PMS1P54277 932 aaKnown RBP8.05□□□□□ -1.12
NPHP1-201ENST00000316534 SPAG1Q07617 926 aa8.05□□□□□ -1.12
NPHP1-201ENST00000316534 MOGSQ13724 837 aa8.05□□□□□ -1.12
NPHP1-201ENST00000316534 NBPF12Q5TAG4 269 aaPredicted RBP8.05□□□□□ -1.12
NPHP1-201ENST00000316534 POTEEQ6S8J3 1075 aa8.05□□□□□ -1.12
NPHP1-201ENST00000316534 SAMD7Q7Z3H4 446 aa8.05□□□□□ -1.12
NPHP1-201ENST00000316534 TC2NQ8N9U0 490 aa8.05□□□□□ -1.12
NPHP1-201ENST00000316534 CALML4Q96GE6 196 aa8.05□□□□□ -1.12
NPHP1-201ENST00000316534 RIT2Q99578 217 aa8.05□□□□□ -1.12
NPHP1-201ENST00000316534 KCND2Q9NZV8 630 aa8.05□□□□□ -1.12
NPHP1-201ENST00000316534 COL20A1Q9P218 1284 aa8.05□□□□□ -1.12
NPHP1-201ENST00000316534 MED24O75448 989 aa8.04□□□□□ -1.12
NPHP1-201ENST00000316534 ATP2B1P20020 1258 aa8.04□□□□□ -1.12
NPHP1-201ENST00000316534 AFMP43652 599 aa8.04□□□□□ -1.12
NPHP1-201ENST00000316534 CATSPERGQ6ZRH7 1159 aa8.04□□□□□ -1.12
NPHP1-201ENST00000316534 CCDC112Q8NEF3 446 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms