RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 K7ENM7 598 aa6.82□□□□□ -1.32
PRKDC-201ENST00000314191 NDUFA10O95299 355 aa6.82□□□□□ -1.32
PRKDC-201ENST00000314191 ZBED6P86452 979 aa6.82□□□□□ -1.32
PRKDC-201ENST00000314191 PPARDQ03181 441 aa6.82□□□□□ -1.32
PRKDC-201ENST00000314191 SND1Q7KZF4 910 aaKnown RBP eCLIP6.82□□□□□ -1.327e-7■■□□□ 11.8
PRKDC-201ENST00000314191 MAP3K14Q99558 947 aa6.82□□□□□ -1.32
PRKDC-201ENST00000314191 MYO1AQ9UBC5 1043 aa6.82□□□□□ -1.32
PRKDC-201ENST00000314191 HPSEQ9Y251 543 aa6.82□□□□□ -1.32
PRKDC-201ENST00000314191 FKBP3Q00688 224 aaKnown RBP6.82□□□□□ -1.32
PRKDC-201ENST00000314191 EVX2Q03828 476 aa6.82□□□□□ -1.32
PRKDC-201ENST00000314191 DCAF15Q66K64 600 aa6.82□□□□□ -1.32
PRKDC-201ENST00000314191 UNC13DQ70J99 1090 aa6.82□□□□□ -1.32
PRKDC-201ENST00000314191 BPIFA3Q9BQP9 254 aa6.82□□□□□ -1.32
PRKDC-201ENST00000314191 NBPF3Q9H094 633 aa6.82□□□□□ -1.32
PRKDC-201ENST00000314191 STAT1P42224 750 aa6.82□□□□□ -1.32
PRKDC-201ENST00000314191 TUBB4BP68371 445 aa6.82□□□□□ -1.32
PRKDC-201ENST00000314191 ANKRD35Q8N283 1001 aa6.82□□□□□ -1.32
PRKDC-201ENST00000314191 PRM3Q9NNZ6 103 aa6.82□□□□□ -1.32
PRKDC-201ENST00000314191 STXBP3O00186 592 aa6.82□□□□□ -1.32
PRKDC-201ENST00000314191 PDHBP11177 359 aa6.82□□□□□ -1.32
PRKDC-201ENST00000314191 CCZ1BP86790 482 aa6.82□□□□□ -1.32
PRKDC-201ENST00000314191 CCZ1P86791 482 aaPredicted RBP6.82□□□□□ -1.32
PRKDC-201ENST00000314191 FAM186BQ8IYM0 893 aa6.82□□□□□ -1.32
PRKDC-201ENST00000314191 AP3B2Q13367 1082 aa6.82□□□□□ -1.32
PRKDC-201ENST00000314191 GRIK5Q16478 980 aa6.82□□□□□ -1.32
PRKDC-201ENST00000314191 SFR1Q86XK3 245 aa6.82□□□□□ -1.32
PRKDC-201ENST00000314191 STAT2P52630 851 aa6.82□□□□□ -1.32
PRKDC-201ENST00000314191 RPS6KA1Q15418 735 aa6.82□□□□□ -1.32
PRKDC-201ENST00000314191 MPHOSPH6Q99547 160 aaKnown RBP6.82□□□□□ -1.32
PRKDC-201ENST00000314191 FAM107BQ9H098 131 aa6.82□□□□□ -1.32
PRKDC-201ENST00000314191 ANKRD62A6NC57 917 aa6.82□□□□□ -1.32
PRKDC-201ENST00000314191 DPYDQ12882 1025 aa6.82□□□□□ -1.32
PRKDC-201ENST00000314191 GNPTABQ3T906 1256 aa6.82□□□□□ -1.32
PRKDC-201ENST00000314191 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.82□□□□□ -1.32
PRKDC-201ENST00000314191 SCAF8Q9UPN6 1271 aaKnown RBP6.82□□□□□ -1.32
PRKDC-201ENST00000314191 DKC1O60832 514 aaKnown RBP eCLIP6.81□□□□□ -1.328e-7■■■□□ 14.9
PRKDC-201ENST00000314191 CCDC50Q8IVM0 306 aa6.81□□□□□ -1.32
PRKDC-201ENST00000314191 NUCKS1Q9H1E3 243 aaKnown RBP6.81□□□□□ -1.32
PRKDC-201ENST00000314191 TAOK3Q9H2K8 898 aa6.81□□□□□ -1.32
PRKDC-201ENST00000314191 EXOC7Q9UPT5 735 aa6.81□□□□□ -1.32
PRKDC-201ENST00000314191 GOLGA6L10A0A0M3HER8 536 aa6.81□□□□□ -1.32
PRKDC-201ENST00000314191 POTEB3A0JP26 581 aa6.81□□□□□ -1.32
PRKDC-201ENST00000314191 POTECB2RU33 542 aa6.81□□□□□ -1.32
PRKDC-201ENST00000314191 MYL1P05976 194 aa6.81□□□□□ -1.32
PRKDC-201ENST00000314191 ZNF543Q08ER8 600 aa6.81□□□□□ -1.32
PRKDC-201ENST00000314191 WHAMMP3Q1A5X7 153 aa6.81□□□□□ -1.32
PRKDC-201ENST00000314191 POTEBQ6S5H4 581 aa6.81□□□□□ -1.32
PRKDC-201ENST00000314191 MCF2L2Q86YR7 1114 aa6.81□□□□□ -1.32
PRKDC-201ENST00000314191 TRIM58Q8NG06 486 aa6.81□□□□□ -1.32
PRKDC-201ENST00000314191 HOOK2Q96ED9 719 aa6.81□□□□□ -1.32
PRKDC-201ENST00000314191 IRX2Q9BZI1 471 aaPredicted RBP6.81□□□□□ -1.32
PRKDC-201ENST00000314191 NHEJ1Q9H9Q4 299 aaPredicted RBP6.81□□□□□ -1.32
PRKDC-201ENST00000314191 TTC26A0AVF1 554 aa6.81□□□□□ -1.32
PRKDC-201ENST00000314191 SPOPO43791 374 aa6.81□□□□□ -1.32
PRKDC-201ENST00000314191 PLCB3Q01970 1234 aa6.81□□□□□ -1.32
PRKDC-201ENST00000314191 NFIAQ12857 509 aa6.81□□□□□ -1.32
PRKDC-201ENST00000314191 SRGAP1Q7Z6B7 1085 aa6.81□□□□□ -1.32
PRKDC-201ENST00000314191 NCAPG2Q86XI2 1143 aa6.81□□□□□ -1.32
PRKDC-201ENST00000314191 IFT74Q96LB3 600 aa6.81□□□□□ -1.32
PRKDC-201ENST00000314191 CSADQ9Y600 493 aa6.81□□□□□ -1.32
PRKDC-201ENST00000314191 ADGRG1Q9Y653 693 aa6.81□□□□□ -1.32
PRKDC-201ENST00000314191 DYDC2Q96IM9 177 aa6.81□□□□□ -1.32
PRKDC-201ENST00000314191 HYOU1Q9Y4L1 999 aa6.81□□□□□ -1.32
PRKDC-201ENST00000314191 PVALEFA0A1B0GWK0 134 aa6.81□□□□□ -1.32
PRKDC-201ENST00000314191 STRN3Q13033 797 aa6.81□□□□□ -1.32
PRKDC-201ENST00000314191 ANKRD40Q6AI12 368 aa6.81□□□□□ -1.32
PRKDC-201ENST00000314191 ADSSL1Q8N142 457 aa6.81□□□□□ -1.32
PRKDC-201ENST00000314191 PIM2Q9P1W9 311 aa6.81□□□□□ -1.32
PRKDC-201ENST00000314191 HHIPL2Q6UWX4 724 aa6.81□□□□□ -1.32
PRKDC-201ENST00000314191 HDXQ7Z353 690 aa6.81□□□□□ -1.32
PRKDC-201ENST00000314191 MAD2L2Q9UI95 211 aa6.81□□□□□ -1.32
PRKDC-201ENST00000314191 GINS2Q9Y248 185 aa6.81□□□□□ -1.32
PRKDC-201ENST00000314191 FTCDO95954 541 aa6.81□□□□□ -1.32
PRKDC-201ENST00000314191 VEGFAP15692 232 aaPredicted RBP6.81□□□□□ -1.32
PRKDC-201ENST00000314191 E4F1Q66K89 784 aaPredicted RBP6.81□□□□□ -1.32
PRKDC-201ENST00000314191 NACC1Q96RE7 527 aa6.81□□□□□ -1.32
PRKDC-201ENST00000314191 POLR1AO95602 1720 aaPredicted RBP6.81□□□□□ -1.32
PRKDC-201ENST00000314191 SMIM23A6NLE4 172 aa6.81□□□□□ -1.32
PRKDC-201ENST00000314191 TUBBP07437 444 aa6.81□□□□□ -1.32
PRKDC-201ENST00000314191 IRX3P78415 501 aaPredicted RBP6.81□□□□□ -1.32
PRKDC-201ENST00000314191 ARHGAP4P98171 946 aa6.81□□□□□ -1.32
PRKDC-201ENST00000314191 SEPT7Q16181 437 aaKnown RBP6.81□□□□□ -1.32
PRKDC-201ENST00000314191 METTL14Q9HCE5 456 aaKnown RBP6.81□□□□□ -1.32
PRKDC-201ENST00000314191 FAM205AQ6ZU69 1335 aa6.81□□□□□ -1.32
PRKDC-201ENST00000314191 WDR44Q5JSH3 913 aa6.81□□□□□ -1.32
PRKDC-201ENST00000314191 WDR11Q9BZH6 1224 aa6.81□□□□□ -1.32
PRKDC-201ENST00000314191 NYAP2Q9P242 653 aa6.81□□□□□ -1.32
PRKDC-201ENST00000314191 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.81□□□□□ -1.32
PRKDC-201ENST00000314191 RICTORQ6R327 1708 aa6.81□□□□□ -1.32
PRKDC-201ENST00000314191 PALM3A6NDB9 673 aaPredicted RBP6.81□□□□□ -1.32
PRKDC-201ENST00000314191 KCNK3O14649 394 aa6.81□□□□□ -1.32
PRKDC-201ENST00000314191 NDUFB10O96000 172 aa6.81□□□□□ -1.32
PRKDC-201ENST00000314191 EIF4A3P38919 411 aaKnown RBP6.81□□□□□ -1.32
PRKDC-201ENST00000314191 NCBP1Q09161 790 aaKnown RBP6.81□□□□□ -1.32
PRKDC-201ENST00000314191 OTUD6AQ7L8S5 288 aa6.81□□□□□ -1.32
PRKDC-201ENST00000314191 CNKSR2Q8WXI2 1034 aa6.81□□□□□ -1.32
PRKDC-201ENST00000314191 RTFDC1Q9BY42 306 aaPredicted RBP6.81□□□□□ -1.32
PRKDC-201ENST00000314191 CAMTA1Q9Y6Y1 1673 aa6.81□□□□□ -1.32
PRKDC-201ENST00000314191 H2AFZP0C0S5 128 aa6.81□□□□□ -1.32
PRKDC-201ENST00000314191 H2AFVQ71UI9 128 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms