RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 NSUN7Q8NE18 718 aaKnown RBP9.59□□□□□ -0.87
COL6A5-202ENST00000312481 LARP4BQ92615 738 aaKnown RBP9.59□□□□□ -0.87
COL6A5-202ENST00000312481 P2RX5Q93086 422 aa9.59□□□□□ -0.87
COL6A5-202ENST00000312481 TRIM33Q9UPN9 1127 aa9.59□□□□□ -0.87
COL6A5-202ENST00000312481 PNMA6EA0A0J9YXQ4 647 aa9.59□□□□□ -0.87
COL6A5-202ENST00000312481 KRT5P13647 590 aa9.59□□□□□ -0.87
COL6A5-202ENST00000312481 TRPV6Q9H1D0 765 aa9.59□□□□□ -0.87
COL6A5-202ENST00000312481 CCNE1P24864 410 aa9.59□□□□□ -0.87
COL6A5-202ENST00000312481 U2AF2P26368 475 aaKnown RBP eCLIP9.59□□□□□ -0.87
COL6A5-202ENST00000312481 DDB1Q16531 1140 aa9.59□□□□□ -0.87
COL6A5-202ENST00000312481 NLRX1Q86UT6 975 aa9.59□□□□□ -0.87
COL6A5-202ENST00000312481 CCDC144CPQ8IYA2 1237 aa9.59□□□□□ -0.87
COL6A5-202ENST00000312481 MTRQ99707 1265 aa9.59□□□□□ -0.87
COL6A5-202ENST00000312481 CEP72Q9P209 647 aa9.59□□□□□ -0.87
COL6A5-202ENST00000312481 FAM8A1Q9UBU6 413 aa9.59□□□□□ -0.87
COL6A5-202ENST00000312481 PCDHA12Q9UN75 941 aa9.59□□□□□ -0.87
COL6A5-202ENST00000312481 LGALS16A8MUM7 142 aa9.58□□□□□ -0.88
COL6A5-202ENST00000312481 PDE6AP16499 860 aa9.58□□□□□ -0.88
COL6A5-202ENST00000312481 COPB2P35606 906 aa9.58□□□□□ -0.88
COL6A5-202ENST00000312481 SNX29Q8TEQ0 813 aa9.58□□□□□ -0.88
COL6A5-202ENST00000312481 PUF60Q9UHX1 559 aaKnown RBP9.58□□□□□ -0.88
COL6A5-202ENST00000312481 SLIT3O75094 1523 aa9.58□□□□□ -0.88
COL6A5-202ENST00000312481 CES2O00748 559 aa9.58□□□□□ -0.88
COL6A5-202ENST00000312481 NME8Q8N427 588 aa9.58□□□□□ -0.88
COL6A5-202ENST00000312481 ZBTB3Q9H5J0 574 aa9.58□□□□□ -0.88
COL6A5-202ENST00000312481 SLC5A4Q9NY91 659 aa9.58□□□□□ -0.88
COL6A5-202ENST00000312481 LAMB4A4D0S4 1761 aa9.58□□□□□ -0.88
COL6A5-202ENST00000312481 ACTN1P12814 892 aa9.58□□□□□ -0.88
COL6A5-202ENST00000312481 DDX5P17844 614 aaKnown RBP9.58□□□□□ -0.88
COL6A5-202ENST00000312481 EXOC3L4Q17RC7 722 aa9.58□□□□□ -0.88
COL6A5-202ENST00000312481 TMCO5AQ8N6Q1 288 aa9.58□□□□□ -0.88
COL6A5-202ENST00000312481 NSMCE1Q8WV22 266 aa9.58□□□□□ -0.88
COL6A5-202ENST00000312481 CAPZA3Q96KX2 299 aa9.58□□□□□ -0.88
COL6A5-202ENST00000312481 PRDM10Q9NQV6 1147 aa9.58□□□□□ -0.88
COL6A5-202ENST00000312481 EEF2P13639 858 aaKnown RBP9.58□□□□□ -0.88
COL6A5-202ENST00000312481 NR1D1P20393 614 aa9.58□□□□□ -0.88
COL6A5-202ENST00000312481 IRX1P78414 480 aaPredicted RBP9.58□□□□□ -0.88
COL6A5-202ENST00000312481 HERC4Q5GLZ8 1057 aaPredicted RBP9.58□□□□□ -0.88
COL6A5-202ENST00000312481 CCDC63Q8NA47 563 aa9.58□□□□□ -0.88
COL6A5-202ENST00000312481 ANKRD7Q92527 254 aa9.58□□□□□ -0.88
COL6A5-202ENST00000312481 NIP7Q9Y221 180 aaKnown RBP eCLIP9.58□□□□□ -0.88
COL6A5-202ENST00000312481 MUTP22033 750 aa9.58□□□□□ -0.88
COL6A5-202ENST00000312481 SLC1A4P43007 532 aa9.58□□□□□ -0.88
COL6A5-202ENST00000312481 PLCB3Q01970 1234 aa9.58□□□□□ -0.88
COL6A5-202ENST00000312481 SLC4A8Q2Y0W8 1093 aa9.58□□□□□ -0.88
COL6A5-202ENST00000312481 LRCH2Q5VUJ6 765 aa9.58□□□□□ -0.88
COL6A5-202ENST00000312481 EP400NLQ6ZTU2 488 aa9.58□□□□□ -0.88
COL6A5-202ENST00000312481 CABP7Q86V35 215 aa9.58□□□□□ -0.88
COL6A5-202ENST00000312481 PSMD1Q99460 953 aa9.58□□□□□ -0.88
COL6A5-202ENST00000312481 KCNK9Q9NPC2 374 aa9.58□□□□□ -0.88
COL6A5-202ENST00000312481 DIP2BQ9P265 1576 aa9.58□□□□□ -0.88
COL6A5-202ENST00000312481 MFAP3LO75121 409 aa9.58□□□□□ -0.88
COL6A5-202ENST00000312481 NFKBIAP25963 317 aa9.58□□□□□ -0.88
COL6A5-202ENST00000312481 DBN1Q16643 649 aa9.58□□□□□ -0.88
COL6A5-202ENST00000312481 USP28Q96RU2 1077 aa9.58□□□□□ -0.88
COL6A5-202ENST00000312481 GCOM2Q9BZD3 368 aaPredicted RBP9.58□□□□□ -0.88
COL6A5-202ENST00000312481 INTS9Q9NV88 658 aaKnown RBP9.58□□□□□ -0.88
COL6A5-202ENST00000312481 SAMD3Q8N6K7 520 aa9.58□□□□□ -0.88
COL6A5-202ENST00000312481 ATP6V0A1Q93050 837 aa9.58□□□□□ -0.88
COL6A5-202ENST00000312481 SIKE1Q9BRV8 207 aa9.58□□□□□ -0.88
COL6A5-202ENST00000312481 TMEM60Q9H2L4 133 aa9.58□□□□□ -0.88
COL6A5-202ENST00000312481 HNRNPRO43390 633 aaKnown RBP9.58□□□□□ -0.88
COL6A5-202ENST00000312481 NDUFA8P51970 172 aa9.58□□□□□ -0.88
COL6A5-202ENST00000312481 RESTQ13127 1097 aa9.58□□□□□ -0.88
COL6A5-202ENST00000312481 PDCD2Q16342 344 aaPredicted RBP9.58□□□□□ -0.88
COL6A5-202ENST00000312481 SLFN12LQ6IEE8 588 aa9.58□□□□□ -0.88
COL6A5-202ENST00000312481 TERB1Q8NA31 727 aa9.58□□□□□ -0.88
COL6A5-202ENST00000312481 KRT12Q99456 494 aa9.58□□□□□ -0.88
COL6A5-202ENST00000312481 DDX25Q9UHL0 483 aaKnown RBP9.58□□□□□ -0.88
COL6A5-202ENST00000312481 ZNF532Q9HCE3 1301 aa9.57□□□□□ -0.88
COL6A5-202ENST00000312481 HOXB6P17509 224 aaKnown RBP9.57□□□□□ -0.88
COL6A5-202ENST00000312481 MFAP3P55082 362 aa9.57□□□□□ -0.88
COL6A5-202ENST00000312481 CASP8Q14790 479 aa9.57□□□□□ -0.88
COL6A5-202ENST00000312481 CCDC117Q8IWD4 279 aaPredicted RBP9.57□□□□□ -0.88
COL6A5-202ENST00000312481 TEX11Q8IYF3 940 aa9.57□□□□□ -0.88
COL6A5-202ENST00000312481 IFNL3Q8IZI9 196 aa9.57□□□□□ -0.88
COL6A5-202ENST00000312481 LRRC8CQ8TDW0 803 aa9.57□□□□□ -0.88
COL6A5-202ENST00000312481 NACC1Q96RE7 527 aa9.57□□□□□ -0.88
COL6A5-202ENST00000312481 KRT15P19012 456 aa9.57□□□□□ -0.88
COL6A5-202ENST00000312481 CHRNA3P32297 505 aa9.57□□□□□ -0.88
COL6A5-202ENST00000312481 LAMB3Q13751 1172 aa9.57□□□□□ -0.88
COL6A5-202ENST00000312481 DCUN1D2Q6PH85 259 aa9.57□□□□□ -0.88
COL6A5-202ENST00000312481 PNPLA7Q6ZV29 1317 aa9.57□□□□□ -0.88
COL6A5-202ENST00000312481 ARHGAP10A1A4S6 786 aa9.57□□□□□ -0.88
COL6A5-202ENST00000312481 PSMC2P35998 433 aaKnown RBP9.57□□□□□ -0.88
COL6A5-202ENST00000312481 USP14P54578 494 aa9.57□□□□□ -0.88
COL6A5-202ENST00000312481 ZC3H6P61129 1189 aaKnown RBP9.57□□□□□ -0.88
COL6A5-202ENST00000312481 NAALADL2Q58DX5 795 aa9.57□□□□□ -0.88
COL6A5-202ENST00000312481 CENPUQ71F23 418 aa9.57□□□□□ -0.88
COL6A5-202ENST00000312481 SND1Q7KZF4 910 aaKnown RBP eCLIP9.57□□□□□ -0.88
COL6A5-202ENST00000312481 RBM41Q96IZ5 413 aaKnown RBP9.57□□□□□ -0.88
COL6A5-202ENST00000312481 SPINK5Q9NQ38 1064 aaPredicted RBP9.57□□□□□ -0.88
COL6A5-202ENST00000312481 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.57□□□□□ -0.88
COL6A5-202ENST00000312481 WDR93Q6P2C0 686 aa9.57□□□□□ -0.88
COL6A5-202ENST00000312481 HEG1Q9ULI3 1381 aa9.57□□□□□ -0.88
COL6A5-202ENST00000312481 ATF2P15336 505 aa9.57□□□□□ -0.88
COL6A5-202ENST00000312481 SCRN1Q12765 414 aa9.57□□□□□ -0.88
COL6A5-202ENST00000312481 SKIDA1Q1XH10 827 aa9.57□□□□□ -0.88
COL6A5-202ENST00000312481 CCT6BQ92526 530 aa9.57□□□□□ -0.88
COL6A5-202ENST00000312481 ZSWIM4Q9H7M6 989 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms