RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 SNCAIPQ9Y6H5 919 aa18.79■□□□□ 0.6
CLCF1-201ENST00000312438 ATAD5Q96QE3 1844 aa18.78■□□□□ 0.6
CLCF1-201ENST00000312438 PPP1R3GB7ZBB8 358 aa18.78■□□□□ 0.6
CLCF1-201ENST00000312438 MSH4O15457 936 aa18.78■□□□□ 0.6
CLCF1-201ENST00000312438 DSG3P32926 999 aa18.78■□□□□ 0.6
CLCF1-201ENST00000312438 NF2P35240 595 aa18.78■□□□□ 0.6
CLCF1-201ENST00000312438 FMR1Q06787 632 aaKnown RBP eCLIP18.78■□□□□ 0.6
CLCF1-201ENST00000312438 TMEM119Q4V9L6 283 aa18.78■□□□□ 0.6
CLCF1-201ENST00000312438 CATSPERGQ6ZRH7 1159 aa18.78■□□□□ 0.6
CLCF1-201ENST00000312438 SPC24Q8NBT2 197 aa18.78■□□□□ 0.6
CLCF1-201ENST00000312438 ATG4CQ96DT6 458 aa18.78■□□□□ 0.6
CLCF1-201ENST00000312438 TRIM9Q9C026 710 aa18.78■□□□□ 0.6
CLCF1-201ENST00000312438 BLOC1S4Q9NUP1 217 aa18.78■□□□□ 0.6
CLCF1-201ENST00000312438 FANCLQ9NW38 375 aa18.78■□□□□ 0.6
CLCF1-201ENST00000312438 ADAMTS5Q9UNA0 930 aa18.78■□□□□ 0.6
CLCF1-201ENST00000312438 KDM3AQ9Y4C1 1321 aa18.78■□□□□ 0.6
CLCF1-201ENST00000312438 IGLV3-22A0A075B6J6 115 aa18.77■□□□□ 0.6
CLCF1-201ENST00000312438 OAZ1P54368 228 aa18.77■□□□□ 0.6
CLCF1-201ENST00000312438 FAM43AQ8N2R8 423 aa18.77■□□□□ 0.6
CLCF1-201ENST00000312438 CYP2W1Q8TAV3 490 aa18.77■□□□□ 0.6
CLCF1-201ENST00000312438 LARP4BQ92615 738 aaKnown RBP18.77■□□□□ 0.6
CLCF1-201ENST00000312438 CCDC47Q96A33 483 aaKnown RBP18.77■□□□□ 0.6
CLCF1-201ENST00000312438 GTPBP4Q9BZE4 634 aaKnown RBP18.77■□□□□ 0.6
CLCF1-201ENST00000312438 HOXC10Q9NYD6 342 aa18.77■□□□□ 0.6
CLCF1-201ENST00000312438 NFIBO00712 420 aa18.77■□□□□ 0.59
CLCF1-201ENST00000312438 KLRC4O43908 158 aa18.77■□□□□ 0.59
CLCF1-201ENST00000312438 RHOBTB3O94955 611 aa18.77■□□□□ 0.59
CLCF1-201ENST00000312438 CD44P16070 742 aaKnown RBP18.77■□□□□ 0.59
CLCF1-201ENST00000312438 CCT6AP40227 531 aaKnown RBP18.77■□□□□ 0.59
CLCF1-201ENST00000312438 KMT5BQ4FZB7 885 aa18.77■□□□□ 0.59
CLCF1-201ENST00000312438 ERMNQ8TAM6 284 aa18.77■□□□□ 0.59
CLCF1-201ENST00000312438 RAD54LQ92698 747 aa18.77■□□□□ 0.59
CLCF1-201ENST00000312438 NFE2L3Q9Y4A8 694 aa18.77■□□□□ 0.59
CLCF1-201ENST00000312438 IQCA1LA6NCM1 817 aa18.76■□□□□ 0.59
CLCF1-201ENST00000312438 SPIRE1Q08AE8 756 aa18.76■□□□□ 0.59
CLCF1-201ENST00000312438 CEP55Q53EZ4 464 aa18.76■□□□□ 0.59
CLCF1-201ENST00000312438 SPATA1Q5VX52 437 aa18.76■□□□□ 0.59
CLCF1-201ENST00000312438 HAUS3Q68CZ6 603 aa18.76■□□□□ 0.59
CLCF1-201ENST00000312438 TRERF1Q96PN7 1200 aa18.76■□□□□ 0.59
CLCF1-201ENST00000312438 DOCK1Q14185 1865 aa18.76■□□□□ 0.59
CLCF1-201ENST00000312438 FANCCQ00597 558 aa18.75■□□□□ 0.59
CLCF1-201ENST00000312438 MCM6Q14566 821 aa18.75■□□□□ 0.59
CLCF1-201ENST00000312438 MUM1L1Q5H9M0 696 aa18.75■□□□□ 0.59
CLCF1-201ENST00000312438 SMYD4Q8IYR2 804 aaPredicted RBP18.75■□□□□ 0.59
CLCF1-201ENST00000312438 CDCA5Q96FF9 252 aa18.75■□□□□ 0.59
CLCF1-201ENST00000312438 UIMC1Q96RL1 719 aa18.75■□□□□ 0.59
CLCF1-201ENST00000312438 MED15Q96RN5 788 aa18.75■□□□□ 0.59
CLCF1-201ENST00000312438 ZKSCAN5Q9Y2L8 839 aa18.75■□□□□ 0.59
CLCF1-201ENST00000312438 MYPNQ86TC9 1320 aa18.75■□□□□ 0.59
CLCF1-201ENST00000312438 MEIS1O00470 390 aa18.74■□□□□ 0.59
CLCF1-201ENST00000312438 ATP2A1O14983 1001 aa18.74■□□□□ 0.59
CLCF1-201ENST00000312438 ATP1A3P13637 1013 aa18.74■□□□□ 0.59
CLCF1-201ENST00000312438 MSNP26038 577 aaKnown RBP18.74■□□□□ 0.59
CLCF1-201ENST00000312438 DHX8Q14562 1220 aaKnown RBP18.74■□□□□ 0.59
CLCF1-201ENST00000312438 ECM1Q16610 540 aa18.74■□□□□ 0.59
CLCF1-201ENST00000312438 KLHL10Q6JEL2 608 aa18.74■□□□□ 0.59
CLCF1-201ENST00000312438 ANKRD13AQ8IZ07 590 aa18.74■□□□□ 0.59
CLCF1-201ENST00000312438 REPS2Q8NFH8 660 aa18.74■□□□□ 0.59
CLCF1-201ENST00000312438 SYTL5Q8TDW5 730 aaPredicted RBP18.74■□□□□ 0.59
CLCF1-201ENST00000312438 HOMER2Q9NSB8 354 aa18.74■□□□□ 0.59
CLCF1-201ENST00000312438 IFNKQ9P0W0 207 aa18.74■□□□□ 0.59
CLCF1-201ENST00000312438 RPTORQ8N122 1335 aa18.74■□□□□ 0.59
CLCF1-201ENST00000312438 PVALEFA0A1B0GWK0 134 aa18.74■□□□□ 0.59
CLCF1-201ENST00000312438 SERPINC1P01008 464 aa18.74■□□□□ 0.59
CLCF1-201ENST00000312438 UBXN2AP68543 259 aa18.74■□□□□ 0.59
CLCF1-201ENST00000312438 ASIC1P78348 528 aa18.74■□□□□ 0.59
CLCF1-201ENST00000312438 SETQ01105 290 aaPredicted RBP18.74■□□□□ 0.59
CLCF1-201ENST00000312438 PPATQ06203 517 aa18.74■□□□□ 0.59
CLCF1-201ENST00000312438 CNNM4Q6P4Q7 775 aa18.74■□□□□ 0.59
CLCF1-201ENST00000312438 PNMA8AQ86V59 439 aaPredicted RBP18.74■□□□□ 0.59
CLCF1-201ENST00000312438 TRMT44Q8IYL2 757 aaKnown RBP18.74■□□□□ 0.59
CLCF1-201ENST00000312438 GIMAP8Q8ND71 665 aaPredicted RBP18.74■□□□□ 0.59
CLCF1-201ENST00000312438 XPO4Q9C0E2 1151 aaKnown RBP18.74■□□□□ 0.59
CLCF1-201ENST00000312438 TAF1DQ9H5J8 278 aaPredicted RBP18.74■□□□□ 0.59
CLCF1-201ENST00000312438 RWDD2AQ9UIY3 292 aa18.74■□□□□ 0.59
CLCF1-201ENST00000312438 KIAA1024Q9UPX6 916 aa18.74■□□□□ 0.59
CLCF1-201ENST00000312438 CBFA2T2O43439 604 aa18.73■□□□□ 0.59
CLCF1-201ENST00000312438 ZNF18P17022 549 aa18.73■□□□□ 0.59
CLCF1-201ENST00000312438 CDK11BP21127 795 aaKnown RBP18.73■□□□□ 0.59
CLCF1-201ENST00000312438 STAT3P40763 770 aa18.73■□□□□ 0.59
CLCF1-201ENST00000312438 RNF207Q6ZRF8 634 aa18.73■□□□□ 0.59
CLCF1-201ENST00000312438 KCNK18Q7Z418 384 aa18.73■□□□□ 0.59
CLCF1-201ENST00000312438 WNK4Q96J92 1243 aa18.73■□□□□ 0.59
CLCF1-201ENST00000312438 MXRA8Q9BRK3 442 aa18.73■□□□□ 0.59
CLCF1-201ENST00000312438 COL20A1Q9P218 1284 aa18.73■□□□□ 0.59
CLCF1-201ENST00000312438 VAV3Q9UKW4 847 aa18.73■□□□□ 0.59
CLCF1-201ENST00000312438 MYH7BA7E2Y1 1941 aa18.73■□□□□ 0.59
CLCF1-201ENST00000312438 MYMKA6NI61 221 aa18.72■□□□□ 0.59
CLCF1-201ENST00000312438 RPA1P27694 616 aa18.72■□□□□ 0.59
CLCF1-201ENST00000312438 PRCPP42785 496 aa18.72■□□□□ 0.59
CLCF1-201ENST00000312438 UBASH3AP57075 661 aa18.72■□□□□ 0.59
CLCF1-201ENST00000312438 RPS6P62753 249 aaKnown RBP18.72■□□□□ 0.59
CLCF1-201ENST00000312438 PDE4DQ08499 809 aa18.72■□□□□ 0.59
CLCF1-201ENST00000312438 STIM1Q13586 685 aa18.72■□□□□ 0.59
CLCF1-201ENST00000312438 NCAPH2Q6IBW4 605 aa18.72■□□□□ 0.59
CLCF1-201ENST00000312438 CCDC186Q7Z3E2 898 aa18.72■□□□□ 0.59
CLCF1-201ENST00000312438 ERO1BQ86YB8 467 aa18.72■□□□□ 0.59
CLCF1-201ENST00000312438 ADSSL1Q8N142 457 aa18.72■□□□□ 0.59
CLCF1-201ENST00000312438 KCTD17Q8N5Z5 321 aa18.72■□□□□ 0.59
CLCF1-201ENST00000312438 SLC5A5Q92911 643 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 230.1 ms