RNA–Protein interactions for RNA: ENST00000310112.7

SNCB-201, Transcript of synuclein beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCB, Length 1,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-201ENST00000310112 USP2O75604 605 aaPredicted RBP26.48■■□□□ 1.83
SNCB-201ENST00000310112 ZNF18P17022 549 aa26.48■■□□□ 1.83
SNCB-201ENST00000310112 MAP3K9P80192 1104 aa26.48■■□□□ 1.83
SNCB-201ENST00000310112 SETQ01105 290 aaPredicted RBP26.48■■□□□ 1.83
SNCB-201ENST00000310112 FMR1Q06787 632 aaKnown RBP eCLIP26.48■■□□□ 1.83
SNCB-201ENST00000310112 COBLL1Q53SF7 1204 aa26.48■■□□□ 1.83
SNCB-201ENST00000310112 AGBL1Q96MI9 1066 aa26.48■■□□□ 1.83
SNCB-201ENST00000310112 BLOC1S4Q9NUP1 217 aa26.48■■□□□ 1.83
SNCB-201ENST00000310112 SYNRGQ9UMZ2 1314 aa26.48■■□□□ 1.83
SNCB-201ENST00000310112 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP26.48■■□□□ 1.83
SNCB-201ENST00000310112 FAM86B1E9PN63 330 aa26.47■■□□□ 1.83
SNCB-201ENST00000310112 FAM86B2P0C5J1 330 aa26.47■■□□□ 1.83
SNCB-201ENST00000310112 CLCN1P35523 988 aa26.47■■□□□ 1.83
SNCB-201ENST00000310112 KMT5BQ4FZB7 885 aa26.47■■□□□ 1.83
SNCB-201ENST00000310112 PRAMEF18Q5VWM3 479 aa26.47■■□□□ 1.83
SNCB-201ENST00000310112 PLIN2Q99541 437 aa26.47■■□□□ 1.83
SNCB-201ENST00000310112 IFNKQ9P0W0 207 aa26.47■■□□□ 1.83
SNCB-201ENST00000310112 AFG3L2Q9Y4W6 797 aa26.47■■□□□ 1.83
SNCB-201ENST00000310112 ZNF500O60304 480 aaPredicted RBP26.46■■□□□ 1.83
SNCB-201ENST00000310112 SERPINC1P01008 464 aa26.46■■□□□ 1.83
SNCB-201ENST00000310112 CCT6AP40227 531 aaKnown RBP26.46■■□□□ 1.83
SNCB-201ENST00000310112 GSDMDP57764 484 aa26.46■■□□□ 1.83
SNCB-201ENST00000310112 PAK1Q13153 545 aa26.46■■□□□ 1.83
SNCB-201ENST00000310112 SAMD1Q6SPF0 538 aaPredicted RBP26.46■■□□□ 1.83
SNCB-201ENST00000310112 NIPA1Q7RTP0 329 aa26.46■■□□□ 1.83
SNCB-201ENST00000310112 KRT26Q7Z3Y9 468 aa26.46■■□□□ 1.83
SNCB-201ENST00000310112 CLEC4DQ8WXI8 215 aa26.46■■□□□ 1.83
SNCB-201ENST00000310112 EXOC1Q9NV70 894 aa26.46■■□□□ 1.83
SNCB-201ENST00000310112 ADAMTS5Q9UNA0 930 aa26.46■■□□□ 1.83
SNCB-201ENST00000310112 PARP14Q460N5 1801 aa26.46■■□□□ 1.83
SNCB-201ENST00000310112 POLR2AP24928 1970 aaKnown RBP26.46■■□□□ 1.83
SNCB-201ENST00000310112 RPTORQ8N122 1335 aa26.46■■□□□ 1.83
SNCB-201ENST00000310112 IGLV3-22A0A075B6J6 115 aa26.46■■□□□ 1.83
SNCB-201ENST00000310112 VWA5AO00534 786 aa26.46■■□□□ 1.83
SNCB-201ENST00000310112 CD44P16070 742 aaKnown RBP26.46■■□□□ 1.83
SNCB-201ENST00000310112 NF2P35240 595 aa26.46■■□□□ 1.83
SNCB-201ENST00000310112 IREB2P48200 963 aaKnown RBP26.46■■□□□ 1.83
SNCB-201ENST00000310112 UBASH3AP57075 661 aa26.46■■□□□ 1.83
SNCB-201ENST00000310112 COG2Q14746 738 aa26.46■■□□□ 1.83
SNCB-201ENST00000310112 GIMAP8Q8ND71 665 aaPredicted RBP26.46■■□□□ 1.83
SNCB-201ENST00000310112 LRRC15Q8TF66 581 aa26.46■■□□□ 1.83
SNCB-201ENST00000310112 TBC1D5Q92609 795 aa26.46■■□□□ 1.83
SNCB-201ENST00000310112 XPO4Q9C0E2 1151 aaKnown RBP26.46■■□□□ 1.83
SNCB-201ENST00000310112 CSADQ9Y600 493 aa26.46■■□□□ 1.83
SNCB-201ENST00000310112 RBBP6Q7Z6E9 1792 aaKnown RBP26.45■■□□□ 1.82
SNCB-201ENST00000310112 MSH4O15457 936 aa26.45■■□□□ 1.82
SNCB-201ENST00000310112 TAL1P17542 331 aaPredicted RBP26.45■■□□□ 1.82
SNCB-201ENST00000310112 CDK11BP21127 795 aaKnown RBP26.45■■□□□ 1.82
SNCB-201ENST00000310112 DSG3P32926 999 aa26.45■■□□□ 1.82
SNCB-201ENST00000310112 ASIC1P78348 528 aa26.45■■□□□ 1.82
SNCB-201ENST00000310112 SPIRE1Q08AE8 756 aa26.45■■□□□ 1.82
SNCB-201ENST00000310112 TKFCQ3LXA3 575 aa26.45■■□□□ 1.82
SNCB-201ENST00000310112 CEP55Q53EZ4 464 aa26.45■■□□□ 1.82
SNCB-201ENST00000310112 ADSSL1Q8N142 457 aa26.45■■□□□ 1.82
SNCB-201ENST00000310112 RRAGDQ9NQL2 400 aaPredicted RBP26.45■■□□□ 1.82
SNCB-201ENST00000310112 EIF2AK3Q9NZJ5 1116 aaKnown RBP26.45■■□□□ 1.82
SNCB-201ENST00000310112 SMCHD1A6NHR9 2005 aa26.44■■□□□ 1.82
SNCB-201ENST00000310112 ATP2A1O14983 1001 aa26.44■■□□□ 1.82
SNCB-201ENST00000310112 GRIN3BO60391 1043 aa26.44■■□□□ 1.82
SNCB-201ENST00000310112 BCRP11274 1271 aa26.44■■□□□ 1.82
SNCB-201ENST00000310112 ALAS1P13196 640 aa26.44■■□□□ 1.82
SNCB-201ENST00000310112 MUTP22033 750 aa26.44■■□□□ 1.82
SNCB-201ENST00000310112 HMGCS2P54868 508 aa26.44■■□□□ 1.82
SNCB-201ENST00000310112 SPAG1Q07617 926 aa26.44■■□□□ 1.82
SNCB-201ENST00000310112 PSMD2Q13200 908 aa26.44■■□□□ 1.82
SNCB-201ENST00000310112 CATSPERGQ6ZRH7 1159 aa26.44■■□□□ 1.82
SNCB-201ENST00000310112 UNC13DQ70J99 1090 aa26.44■■□□□ 1.82
SNCB-201ENST00000310112 CCDC186Q7Z3E2 898 aa26.44■■□□□ 1.82
SNCB-201ENST00000310112 DHTKD1Q96HY7 919 aaPredicted RBP26.44■■□□□ 1.82
SNCB-201ENST00000310112 CTAGE1Q96RT6 745 aa26.44■■□□□ 1.82
SNCB-201ENST00000310112 RAVER2Q9HCJ3 691 aaKnown RBP26.44■■□□□ 1.82
SNCB-201ENST00000310112 BMP2KQ9NSY1 1161 aaPredicted RBP26.44■■□□□ 1.82
SNCB-201ENST00000310112 FRMPD4Q14CM0 1322 aa26.43■■□□□ 1.82
SNCB-201ENST00000310112 PSMA7O14818 248 aa26.43■■□□□ 1.82
SNCB-201ENST00000310112 RPA1P27694 616 aa26.43■■□□□ 1.82
SNCB-201ENST00000310112 MCM6Q14566 821 aa26.43■■□□□ 1.82
SNCB-201ENST00000310112 SLC5A5Q92911 643 aa26.43■■□□□ 1.82
SNCB-201ENST00000310112 POLR3CQ9BUI4 534 aaPredicted RBP26.43■■□□□ 1.82
SNCB-201ENST00000310112 HOXC10Q9NYD6 342 aa26.43■■□□□ 1.82
SNCB-201ENST00000310112 SNCAIPQ9Y6H5 919 aa26.43■■□□□ 1.82
SNCB-201ENST00000310112 PAPPA2Q9BXP8 1791 aa26.42■■□□□ 1.82
SNCB-201ENST00000310112 MEIS1O00470 390 aa26.42■■□□□ 1.82
SNCB-201ENST00000310112 ATP1A3P13637 1013 aa26.42■■□□□ 1.82
SNCB-201ENST00000310112 TPD52L1Q16890 204 aaPredicted RBP26.42■■□□□ 1.82
SNCB-201ENST00000310112 CDKAL1Q5VV42 579 aa26.42■■□□□ 1.82
SNCB-201ENST00000310112 KLHL10Q6JEL2 608 aa26.42■■□□□ 1.82
SNCB-201ENST00000310112 CPXCR1Q8N123 301 aa26.42■■□□□ 1.82
SNCB-201ENST00000310112 NOC3LQ8WTT2 800 aaKnown RBP26.42■■□□□ 1.82
SNCB-201ENST00000310112 MED15Q96RN5 788 aa26.42■■□□□ 1.82
SNCB-201ENST00000310112 NUDT12Q9BQG2 462 aa26.42■■□□□ 1.82
SNCB-201ENST00000310112 WDR11Q9BZH6 1224 aa26.42■■□□□ 1.82
SNCB-201ENST00000310112 CTNND2Q9UQB3 1225 aa26.42■■□□□ 1.82
SNCB-201ENST00000310112 EPHX2P34913 555 aa26.41■■□□□ 1.82
SNCB-201ENST00000310112 PRCPP42785 496 aa26.41■■□□□ 1.82
SNCB-201ENST00000310112 PDE4DQ08499 809 aa26.41■■□□□ 1.82
SNCB-201ENST00000310112 XRRA1Q6P2D8 792 aa26.41■■□□□ 1.82
SNCB-201ENST00000310112 PPP1R3FQ6ZSY5 799 aaPredicted RBP26.41■■□□□ 1.82
SNCB-201ENST00000310112 TRMT44Q8IYL2 757 aaKnown RBP26.41■■□□□ 1.82
SNCB-201ENST00000310112 REPS2Q8NFH8 660 aa26.41■■□□□ 1.82
SNCB-201ENST00000310112 NELFBQ8WX92 580 aa26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms