RNA–Protein interactions for RNA: ENST00000309862.10

PGAP3-202, Transcript of post-GPI attachment to proteins 3, humanhuman

TSL 2

Gene PGAP3, Length 3,028 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP3-202ENST00000309862 TAF1P21675 1872 aa17.09■□□□□ 0.33
PGAP3-202ENST00000309862 KIAA0754O94854 1291 aa17.09■□□□□ 0.33
PGAP3-202ENST00000309862 EHHADHQ08426 723 aa17.09■□□□□ 0.33
PGAP3-202ENST00000309862 RNF187Q5TA31 235 aaPredicted RBP17.09■□□□□ 0.33
PGAP3-202ENST00000309862 ZNF572Q7Z3I7 529 aaPredicted RBP17.09■□□□□ 0.33
PGAP3-202ENST00000309862 DNAAF5Q86Y56 855 aa17.09■□□□□ 0.33
PGAP3-202ENST00000309862 SUGP1Q8IWZ8 645 aaKnown RBP17.09■□□□□ 0.33
PGAP3-202ENST00000309862 KLHL7Q8IXQ5 586 aa17.09■□□□□ 0.33
PGAP3-202ENST00000309862 LSP1P33241 339 aa17.08■□□□□ 0.33
PGAP3-202ENST00000309862 ITIH3Q06033 890 aa17.08■□□□□ 0.33
PGAP3-202ENST00000309862 UBE4AQ14139 1066 aa17.08■□□□□ 0.33
PGAP3-202ENST00000309862 MAN2A1Q16706 1144 aa17.08■□□□□ 0.33
PGAP3-202ENST00000309862 CAVIN3Q969G5 261 aa17.08■□□□□ 0.33
PGAP3-202ENST00000309862 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.08■□□□□ 0.33
PGAP3-202ENST00000309862 SMCO2A6NFE2 343 aa17.08■□□□□ 0.32
PGAP3-202ENST00000309862 TSPY3P0CV98 308 aa17.08■□□□□ 0.32
PGAP3-202ENST00000309862 TSPY8P0CW00 308 aa17.08■□□□□ 0.32
PGAP3-202ENST00000309862 EPB41P11171 864 aaKnown RBP17.08■□□□□ 0.32
PGAP3-202ENST00000309862 SKOR1P84550 965 aa17.08■□□□□ 0.32
PGAP3-202ENST00000309862 TMED8Q6PL24 325 aaPredicted RBP17.08■□□□□ 0.32
PGAP3-202ENST00000309862 SV2BQ7L1I2 683 aa17.08■□□□□ 0.32
PGAP3-202ENST00000309862 MAATS1Q7Z4T9 603 aa17.08■□□□□ 0.32
PGAP3-202ENST00000309862 IQCKQ8N0W5 287 aa17.08■□□□□ 0.32
PGAP3-202ENST00000309862 GOLPH3Q9H4A6 298 aa17.08■□□□□ 0.32
PGAP3-202ENST00000309862 ATP8A2Q9NTI2 1148 aa17.08■□□□□ 0.32
PGAP3-202ENST00000309862 TMEM260Q9NX78 707 aa17.08■□□□□ 0.32
PGAP3-202ENST00000309862 ARPP21Q9UBL0 812 aaPredicted RBP17.08■□□□□ 0.32
PGAP3-202ENST00000309862 ANKRD36CQ5JPF3 1778 aa17.08■□□□□ 0.32
PGAP3-202ENST00000309862 KLRF2D3W0D1 207 aa17.07■□□□□ 0.32
PGAP3-202ENST00000309862 AMPD3Q01432 767 aa17.07■□□□□ 0.32
PGAP3-202ENST00000309862 GRM4Q14833 912 aa17.07■□□□□ 0.32
PGAP3-202ENST00000309862 PARP10Q53GL7 1025 aa17.07■□□□□ 0.32
PGAP3-202ENST00000309862 TBCKQ8TEA7 893 aa17.07■□□□□ 0.32
PGAP3-202ENST00000309862 CASKIN2Q8WXE0 1202 aa17.07■□□□□ 0.32
PGAP3-202ENST00000309862 CALML4Q96GE6 196 aa17.07■□□□□ 0.32
PGAP3-202ENST00000309862 TBC1D7Q9P0N9 293 aa17.07■□□□□ 0.32
PGAP3-202ENST00000309862 PACSIN1Q9BY11 444 aa17.07■□□□□ 0.32
PGAP3-202ENST00000309862 SAP30BPQ9UHR5 308 aaKnown RBP17.07■□□□□ 0.32
PGAP3-202ENST00000309862 IBSPP21815 317 aaPredicted RBP17.07■□□□□ 0.32
PGAP3-202ENST00000309862 KLRC1P26715 233 aa17.07■□□□□ 0.32
PGAP3-202ENST00000309862 NONOQ15233 471 aaKnown RBP eCLIP17.07■□□□□ 0.32
PGAP3-202ENST00000309862 HGSNATQ68CP4 663 aa17.07■□□□□ 0.32
PGAP3-202ENST00000309862 PDXDC1Q6P996 788 aa17.07■□□□□ 0.32
PGAP3-202ENST00000309862 CCDC84Q86UT8 332 aaPredicted RBP17.07■□□□□ 0.32
PGAP3-202ENST00000309862 OR2W6PQ8NHA6 318 aa17.07■□□□□ 0.32
PGAP3-202ENST00000309862 PIK3R5Q8WYR1 880 aa17.07■□□□□ 0.32
PGAP3-202ENST00000309862 NUDT12Q9BQG2 462 aa17.07■□□□□ 0.32
PGAP3-202ENST00000309862 CUEDC2Q9H467 287 aa17.07■□□□□ 0.32
PGAP3-202ENST00000309862 BLOC1S4Q9NUP1 217 aa17.07■□□□□ 0.32
PGAP3-202ENST00000309862 POTEMA6NI47 508 aa17.06■□□□□ 0.32
PGAP3-202ENST00000309862 LCA5LO95447 670 aa17.06■□□□□ 0.32
PGAP3-202ENST00000309862 NR1D1P20393 614 aa17.06■□□□□ 0.32
PGAP3-202ENST00000309862 PRPHP41219 470 aa17.06■□□□□ 0.32
PGAP3-202ENST00000309862 KCNMA1Q12791 1236 aa17.06■□□□□ 0.32
PGAP3-202ENST00000309862 HLTFQ14527 1009 aaKnown RBP eCLIP17.06■□□□□ 0.32
PGAP3-202ENST00000309862 NAA35Q5VZE5 725 aa17.06■□□□□ 0.32
PGAP3-202ENST00000309862 USP17L2Q6R6M4 530 aa17.06■□□□□ 0.32
PGAP3-202ENST00000309862 TXNRD3Q86VQ6 643 aa17.06■□□□□ 0.32
PGAP3-202ENST00000309862 TBC1D5Q92609 795 aa17.06■□□□□ 0.32
PGAP3-202ENST00000309862 GJA10Q969M2 543 aa17.06■□□□□ 0.32
PGAP3-202ENST00000309862 TMEM47Q9BQJ4 181 aa17.06■□□□□ 0.32
PGAP3-202ENST00000309862 PPANQ9NQ55 473 aaKnown RBP17.06■□□□□ 0.32
PGAP3-202ENST00000309862 BACH1O14867 736 aa17.06■□□□□ 0.32
PGAP3-202ENST00000309862 TLR2O60603 784 aa17.06■□□□□ 0.32
PGAP3-202ENST00000309862 POLR2FP61218 127 aaKnown RBP17.06■□□□□ 0.32
PGAP3-202ENST00000309862 GRB10Q13322 594 aa17.06■□□□□ 0.32
PGAP3-202ENST00000309862 ASTE1Q2TB18 679 aaPredicted RBP17.06■□□□□ 0.32
PGAP3-202ENST00000309862 CEP85LQ5SZL2 805 aa17.06■□□□□ 0.32
PGAP3-202ENST00000309862 DGKHQ86XP1 1220 aa17.06■□□□□ 0.32
PGAP3-202ENST00000309862 CDK5RAP3Q96JB5 506 aa17.06■□□□□ 0.32
PGAP3-202ENST00000309862 AK8Q96MA6 479 aa17.06■□□□□ 0.32
PGAP3-202ENST00000309862 FAM170AA1A519 330 aa17.05■□□□□ 0.32
PGAP3-202ENST00000309862 LAD1O00515 517 aa17.05■□□□□ 0.32
PGAP3-202ENST00000309862 HDLBPQ00341 1268 aaKnown RBP17.05■□□□□ 0.32
PGAP3-202ENST00000309862 PAK2Q13177 524 aa17.05■□□□□ 0.32
PGAP3-202ENST00000309862 B4GALNT4Q76KP1 1039 aa17.05■□□□□ 0.32
PGAP3-202ENST00000309862 NEK8Q86SG6 692 aa17.05■□□□□ 0.32
PGAP3-202ENST00000309862 SLC51AQ86UW1 340 aa17.05■□□□□ 0.32
PGAP3-202ENST00000309862 GDF3Q9NR23 364 aa17.05■□□□□ 0.32
PGAP3-202ENST00000309862 MEFVO15553 781 aaPredicted RBP17.05■□□□□ 0.32
PGAP3-202ENST00000309862 IFT88Q13099 833 aa17.05■□□□□ 0.32
PGAP3-202ENST00000309862 KCNK18Q7Z418 384 aa17.05■□□□□ 0.32
PGAP3-202ENST00000309862 DDX42Q86XP3 938 aaKnown RBP eCLIP17.05■□□□□ 0.32
PGAP3-202ENST00000309862 DZIP1Q86YF9 867 aaKnown RBP17.05■□□□□ 0.32
PGAP3-202ENST00000309862 NCAPGQ9BPX3 1015 aa17.05■□□□□ 0.32
PGAP3-202ENST00000309862 UBA5Q9GZZ9 404 aa17.05■□□□□ 0.32
PGAP3-202ENST00000309862 ADAMTS1Q9UHI8 967 aa17.05■□□□□ 0.32
PGAP3-202ENST00000309862 E7EVH7 732 aa17.05■□□□□ 0.32
PGAP3-202ENST00000309862 PJA2O43164 708 aa17.05■□□□□ 0.32
PGAP3-202ENST00000309862 SSBP05455 408 aaKnown RBP eCLIP17.05■□□□□ 0.32
PGAP3-202ENST00000309862 HIBADHP31937 336 aaKnown RBP17.05■□□□□ 0.32
PGAP3-202ENST00000309862 KCNQ4P56696 695 aa17.05■□□□□ 0.32
PGAP3-202ENST00000309862 ITPK1Q13572 414 aa17.05■□□□□ 0.32
PGAP3-202ENST00000309862 DIXDC1Q155Q3 683 aa17.05■□□□□ 0.32
PGAP3-202ENST00000309862 ZNF444Q8N0Y2 327 aaPredicted RBP17.05■□□□□ 0.32
PGAP3-202ENST00000309862 ZNF473Q8WTR7 871 aaKnown RBP17.05■□□□□ 0.32
PGAP3-202ENST00000309862 YY1AP1Q9H869 796 aa17.05■□□□□ 0.32
PGAP3-202ENST00000309862 BSDC1Q9NW68 430 aaPredicted RBP17.05■□□□□ 0.32
PGAP3-202ENST00000309862 PLAAQ9Y263 795 aa17.05■□□□□ 0.32
PGAP3-202ENST00000309862 ITGB4P16144 1822 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms