RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 SPATA1Q5VX52 437 aa16.26■□□□□ 0.19
SHCBP1-201ENST00000303383 ANKRD20A12PQ8NF67 263 aa16.26■□□□□ 0.19
SHCBP1-201ENST00000303383 IDEP14735 1019 aa16.26■□□□□ 0.19
SHCBP1-201ENST00000303383 MCM6Q14566 821 aa16.26■□□□□ 0.19
SHCBP1-201ENST00000303383 WDR18Q9BV38 432 aa16.26■□□□□ 0.19
SHCBP1-201ENST00000303383 TBX3O15119 743 aa16.25■□□□□ 0.19
SHCBP1-201ENST00000303383 PPP1R12BO60237 982 aaPredicted RBP16.25■□□□□ 0.19
SHCBP1-201ENST00000303383 Q4G0T1 1027 aa16.25■□□□□ 0.19
SHCBP1-201ENST00000303383 FAM20AQ96MK3 541 aa16.25■□□□□ 0.19
SHCBP1-201ENST00000303383 TRIM9Q9C026 710 aa16.25■□□□□ 0.19
SHCBP1-201ENST00000303383 EMILIN3Q9NT22 766 aa16.25■□□□□ 0.19
SHCBP1-201ENST00000303383 ZNF112Q9UJU3 913 aa16.25■□□□□ 0.19
SHCBP1-201ENST00000303383 PNMA2Q9UL42 364 aa16.25■□□□□ 0.19
SHCBP1-201ENST00000303383 GDAQ9Y2T3 454 aa16.25■□□□□ 0.19
SHCBP1-201ENST00000303383 PSMA7O14818 248 aa16.25■□□□□ 0.19
SHCBP1-201ENST00000303383 CD44P16070 742 aaKnown RBP16.25■□□□□ 0.19
SHCBP1-201ENST00000303383 KCNB1Q14721 858 aa16.25■□□□□ 0.19
SHCBP1-201ENST00000303383 NELFBQ8WX92 580 aa16.25■□□□□ 0.19
SHCBP1-201ENST00000303383 KLRG1Q96E93 195 aa16.25■□□□□ 0.19
SHCBP1-201ENST00000303383 KCNMB3Q9NPA1 279 aa16.25■□□□□ 0.19
SHCBP1-201ENST00000303383 PPP1R9AQ9ULJ8 1098 aa16.25■□□□□ 0.19
SHCBP1-201ENST00000303383 GSDMDP57764 484 aa16.25■□□□□ 0.19
SHCBP1-201ENST00000303383 DYMQ7RTS9 669 aa16.25■□□□□ 0.19
SHCBP1-201ENST00000303383 P2RX7Q99572 595 aaKnown RBP16.25■□□□□ 0.19
SHCBP1-201ENST00000303383 GTPBP4Q9BZE4 634 aaKnown RBP16.25■□□□□ 0.19
SHCBP1-201ENST00000303383 SAMSN1Q9NSI8 373 aaKnown RBP16.25■□□□□ 0.19
SHCBP1-201ENST00000303383 PPP1R3GB7ZBB8 358 aa16.24■□□□□ 0.19
SHCBP1-201ENST00000303383 C19orf81C9J6K1 198 aa16.24■□□□□ 0.19
SHCBP1-201ENST00000303383 FAM86B1E9PN63 330 aa16.24■□□□□ 0.19
SHCBP1-201ENST00000303383 FAM86B2P0C5J1 330 aa16.24■□□□□ 0.19
SHCBP1-201ENST00000303383 GPR162Q16538 588 aa16.24■□□□□ 0.19
SHCBP1-201ENST00000303383 RAD54LQ92698 747 aa16.24■□□□□ 0.19
SHCBP1-201ENST00000303383 KIAA1024Q9UPX6 916 aa16.24■□□□□ 0.19
SHCBP1-201ENST00000303383 CSADQ9Y600 493 aa16.24■□□□□ 0.19
SHCBP1-201ENST00000303383 PITPNM2Q9BZ72 1349 aa16.24■□□□□ 0.19
SHCBP1-201ENST00000303383 KRT18P05783 430 aaKnown RBP16.24■□□□□ 0.19
SHCBP1-201ENST00000303383 FDX1P10109 184 aa16.24■□□□□ 0.19
SHCBP1-201ENST00000303383 YBX3P16989 372 aaKnown RBP eCLIP16.24■□□□□ 0.196e-6■□□□□ 10.6
SHCBP1-201ENST00000303383 NF2P35240 595 aa16.24■□□□□ 0.19
SHCBP1-201ENST00000303383 TTLL12Q14166 644 aaPredicted RBP16.24■□□□□ 0.19
SHCBP1-201ENST00000303383 FILIP1LQ4L180 1135 aa16.24■□□□□ 0.19
SHCBP1-201ENST00000303383 DNTTIP2Q5QJE6 756 aaKnown RBP16.24■□□□□ 0.19
SHCBP1-201ENST00000303383 PNMA5Q96PV4 448 aa16.24■□□□□ 0.19
SHCBP1-201ENST00000303383 C7orf25Q9BPX7 421 aa16.24■□□□□ 0.19
SHCBP1-201ENST00000303383 STK24Q9Y6E0 443 aa16.24■□□□□ 0.19
SHCBP1-201ENST00000303383 DICER1Q9UPY3 1922 aaKnown RBP16.24■□□□□ 0.19
SHCBP1-201ENST00000303383 SMCHD1A6NHR9 2005 aa16.24■□□□□ 0.19
SHCBP1-201ENST00000303383 STAT3P40763 770 aa16.24■□□□□ 0.19
SHCBP1-201ENST00000303383 SEMA3FQ13275 785 aa16.24■□□□□ 0.19
SHCBP1-201ENST00000303383 CNNM4Q6P4Q7 775 aa16.24■□□□□ 0.19
SHCBP1-201ENST00000303383 NUDT12Q9BQG2 462 aa16.24■□□□□ 0.19
SHCBP1-201ENST00000303383 SLC38A10Q9HBR0 1119 aa16.24■□□□□ 0.19
SHCBP1-201ENST00000303383 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.24■□□□□ 0.19
SHCBP1-201ENST00000303383 CYP3A4P08684 503 aa16.23■□□□□ 0.19
SHCBP1-201ENST00000303383 CIITAP33076 1130 aa16.23■□□□□ 0.19
SHCBP1-201ENST00000303383 KRT26Q7Z3Y9 468 aa16.23■□□□□ 0.19
SHCBP1-201ENST00000303383 MBOAT7Q96N66 472 aa16.23■□□□□ 0.19
SHCBP1-201ENST00000303383 IMPACTQ9P2X3 320 aa16.23■□□□□ 0.19
SHCBP1-201ENST00000303383 RWDD2AQ9UIY3 292 aa16.23■□□□□ 0.19
SHCBP1-201ENST00000303383 RHOBTB3O94955 611 aa16.23■□□□□ 0.19
SHCBP1-201ENST00000303383 PRCPP42785 496 aa16.23■□□□□ 0.19
SHCBP1-201ENST00000303383 CCDC144BQ3MJ40 725 aa16.23■□□□□ 0.19
SHCBP1-201ENST00000303383 COBLO75128 1261 aa16.22■□□□□ 0.19
SHCBP1-201ENST00000303383 NSMFQ6X4W1 530 aa16.22■□□□□ 0.19
SHCBP1-201ENST00000303383 HSD3B7Q9H2F3 369 aa16.22■□□□□ 0.19
SHCBP1-201ENST00000303383 RABGAP1Q9Y3P9 1069 aa16.22■□□□□ 0.19
SHCBP1-201ENST00000303383 MSH4O15457 936 aa16.22■□□□□ 0.19
SHCBP1-201ENST00000303383 CYP2W1Q8TAV3 490 aa16.22■□□□□ 0.19
SHCBP1-201ENST00000303383 ETNPPLQ8TBG4 499 aa16.22■□□□□ 0.19
SHCBP1-201ENST00000303383 CRYGNQ8WXF5 182 aa16.22■□□□□ 0.19
SHCBP1-201ENST00000303383 ATG4CQ96DT6 458 aa16.22■□□□□ 0.19
SHCBP1-201ENST00000303383 CTAGE1Q96RT6 745 aa16.22■□□□□ 0.19
SHCBP1-201ENST00000303383 BLOC1S4Q9NUP1 217 aa16.22■□□□□ 0.19
SHCBP1-201ENST00000303383 POTEB3A0JP26 581 aa16.22■□□□□ 0.19
SHCBP1-201ENST00000303383 POTECB2RU33 542 aa16.22■□□□□ 0.19
SHCBP1-201ENST00000303383 NFIBO00712 420 aa16.22■□□□□ 0.19
SHCBP1-201ENST00000303383 ZNF500O60304 480 aaPredicted RBP16.22■□□□□ 0.19
SHCBP1-201ENST00000303383 LRCH2Q5VUJ6 765 aa16.22■□□□□ 0.19
SHCBP1-201ENST00000303383 POTEBQ6S5H4 581 aa16.22■□□□□ 0.19
SHCBP1-201ENST00000303383 LRRC15Q8TF66 581 aa16.22■□□□□ 0.19
SHCBP1-201ENST00000303383 TRIM47Q96LD4 638 aa16.22■□□□□ 0.19
SHCBP1-201ENST00000303383 ADM5C9JUS6 153 aa16.21■□□□□ 0.19
SHCBP1-201ENST00000303383 SFPQP23246 707 aaKnown RBP eCLIP16.21■□□□□ 0.19
SHCBP1-201ENST00000303383 PPP1R2P41236 205 aa16.21■□□□□ 0.19
SHCBP1-201ENST00000303383 MAP3K9P80192 1104 aa16.21■□□□□ 0.19
SHCBP1-201ENST00000303383 LRMPQ12912 555 aa16.21■□□□□ 0.19
SHCBP1-201ENST00000303383 CEP55Q53EZ4 464 aa16.21■□□□□ 0.19
SHCBP1-201ENST00000303383 ZFP91Q96JP5 570 aaPredicted RBP16.21■□□□□ 0.19
SHCBP1-201ENST00000303383 CHMP2AO43633 222 aa16.21■□□□□ 0.19
SHCBP1-201ENST00000303383 GAS7O60861 476 aa16.21■□□□□ 0.19
SHCBP1-201ENST00000303383 TMEM119Q4V9L6 283 aa16.21■□□□□ 0.19
SHCBP1-201ENST00000303383 TRERF1Q96PN7 1200 aa16.21■□□□□ 0.19
SHCBP1-201ENST00000303383 KCNF1Q9H3M0 494 aa16.21■□□□□ 0.19
SHCBP1-201ENST00000303383 MAGEC2Q9UBF1 373 aaPredicted RBP16.21■□□□□ 0.19
SHCBP1-201ENST00000303383 ZNF536O15090 1300 aa16.21■□□□□ 0.19
SHCBP1-201ENST00000303383 DOCK1Q14185 1865 aa16.21■□□□□ 0.19
SHCBP1-201ENST00000303383 MYMKA6NI61 221 aa16.21■□□□□ 0.18
SHCBP1-201ENST00000303383 KLRC4O43908 158 aa16.21■□□□□ 0.18
SHCBP1-201ENST00000303383 IREB2P48200 963 aaKnown RBP16.21■□□□□ 0.18
SHCBP1-201ENST00000303383 SPAG1Q07617 926 aa16.21■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms