RNA–Protein interactions for RNA: ENST00000301981.7

LRRC28-201, Transcript of leucine rich repeat containing 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC28, Length 5,971 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-201ENST00000301981 USP40Q9NVE5 1235 aa8.46□□□□□ -1.05
LRRC28-201ENST00000301981 HECW2Q9P2P5 1572 aa8.46□□□□□ -1.06
LRRC28-201ENST00000301981 MYO1FO00160 1098 aa8.46□□□□□ -1.06
LRRC28-201ENST00000301981 TAL1P17542 331 aaPredicted RBP8.46□□□□□ -1.06
LRRC28-201ENST00000301981 TOB1P50616 345 aaPredicted RBP8.46□□□□□ -1.06
LRRC28-201ENST00000301981 FAM26FQ5R3K3 315 aa8.46□□□□□ -1.06
LRRC28-201ENST00000301981 TMCO4Q5TGY1 634 aa8.46□□□□□ -1.06
LRRC28-201ENST00000301981 ARHGEF2Q92974 986 aaKnown RBP8.46□□□□□ -1.06
LRRC28-201ENST00000301981 NDST4Q9H3R1 872 aa8.46□□□□□ -1.06
LRRC28-201ENST00000301981 FEZ2Q9UHY8 353 aaPredicted RBP8.46□□□□□ -1.06
LRRC28-201ENST00000301981 DNM3Q9UQ16 869 aa8.46□□□□□ -1.06
LRRC28-201ENST00000301981 ERVV-2B6SEH9 535 aa8.46□□□□□ -1.06
LRRC28-201ENST00000301981 NCAPHQ15003 741 aa8.46□□□□□ -1.06
LRRC28-201ENST00000301981 DENND2CQ68D51 928 aa8.46□□□□□ -1.06
LRRC28-201ENST00000301981 TBC1D1Q86TI0 1168 aaPredicted RBP8.46□□□□□ -1.06
LRRC28-201ENST00000301981 LMBR1Q8WVP7 490 aa8.46□□□□□ -1.06
LRRC28-201ENST00000301981 SPIRE2Q8WWL2 714 aa8.46□□□□□ -1.06
LRRC28-201ENST00000301981 COL15A1P39059 1388 aa8.45□□□□□ -1.06
LRRC28-201ENST00000301981 TDP2O95551 362 aa8.45□□□□□ -1.06
LRRC28-201ENST00000301981 XRCC5P13010 732 aaKnown RBP8.45□□□□□ -1.06
LRRC28-201ENST00000301981 PPP1R21Q6ZMI0 780 aa8.45□□□□□ -1.06
LRRC28-201ENST00000301981 FAM47EQ6ZV65 393 aa8.45□□□□□ -1.06
LRRC28-201ENST00000301981 PAF1Q8N7H5 531 aa8.45□□□□□ -1.06
LRRC28-201ENST00000301981 HAUS1Q96CS2 278 aa8.45□□□□□ -1.06
LRRC28-201ENST00000301981 FAM118BQ9BPY3 351 aa8.45□□□□□ -1.06
LRRC28-201ENST00000301981 MAGED2Q9UNF1 606 aaPredicted RBP8.45□□□□□ -1.06
LRRC28-201ENST00000301981 ZC3H13Q5T200 1668 aaKnown RBP8.45□□□□□ -1.06
LRRC28-201ENST00000301981 TMOD1P28289 359 aa8.45□□□□□ -1.06
LRRC28-201ENST00000301981 MRPL12P52815 198 aaKnown RBP8.45□□□□□ -1.06
LRRC28-201ENST00000301981 SYCP2LQ5T4T6 812 aa8.45□□□□□ -1.06
LRRC28-201ENST00000301981 CYP4F22Q6NT55 531 aa8.45□□□□□ -1.06
LRRC28-201ENST00000301981 VSIG1Q86XK7 387 aa8.45□□□□□ -1.06
LRRC28-201ENST00000301981 SUPT20HQ8NEM7 779 aa8.45□□□□□ -1.06
LRRC28-201ENST00000301981 MED4Q9NPJ6 270 aa8.45□□□□□ -1.06
LRRC28-201ENST00000301981 KCNQ2O43526 872 aa8.45□□□□□ -1.06
LRRC28-201ENST00000301981 CTTNQ14247 550 aaKnown RBP8.45□□□□□ -1.06
LRRC28-201ENST00000301981 NR1I3Q14994 352 aa8.45□□□□□ -1.06
LRRC28-201ENST00000301981 CACNA2D3Q8IZS8 1091 aa8.45□□□□□ -1.06
LRRC28-201ENST00000301981 PPM1KQ8N3J5 372 aa8.45□□□□□ -1.06
LRRC28-201ENST00000301981 LRRC27Q9C0I9 530 aa8.45□□□□□ -1.06
LRRC28-201ENST00000301981 TMEM60Q9H2L4 133 aa8.45□□□□□ -1.06
LRRC28-201ENST00000301981 MYOM1P52179 1685 aa8.45□□□□□ -1.06
LRRC28-201ENST00000301981 INO80Q9ULG1 1556 aaPredicted RBP8.45□□□□□ -1.06
LRRC28-201ENST00000301981 ZSCAN5CA6NGD5 496 aaPredicted RBP8.45□□□□□ -1.06
LRRC28-201ENST00000301981 GOLGA8KD6RF30 607 aa8.45□□□□□ -1.06
LRRC28-201ENST00000301981 POC1B-GALNT4F8VUJ3 575 aa8.45□□□□□ -1.06
LRRC28-201ENST00000301981 ACSL3O95573 720 aa8.45□□□□□ -1.06
LRRC28-201ENST00000301981 SLC30A10Q6XR72 485 aa8.45□□□□□ -1.06
LRRC28-201ENST00000301981 RFX8Q6ZV50 586 aa8.45□□□□□ -1.06
LRRC28-201ENST00000301981 ATG3Q9NT62 314 aa8.45□□□□□ -1.06
LRRC28-201ENST00000301981 MTRF1LQ9UGC7 380 aaKnown RBP8.45□□□□□ -1.06
LRRC28-201ENST00000301981 ARMCX3Q9UH62 379 aaPredicted RBP8.45□□□□□ -1.06
LRRC28-201ENST00000301981 SNX24Q9Y343 169 aa8.45□□□□□ -1.06
LRRC28-201ENST00000301981 DEPDC5O75140 1603 aa8.45□□□□□ -1.06
LRRC28-201ENST00000301981 A0A087X0B3 334 aa8.45□□□□□ -1.06
LRRC28-201ENST00000301981 POTEJP0CG39 1038 aa8.45□□□□□ -1.06
LRRC28-201ENST00000301981 NR1D1P20393 614 aa8.45□□□□□ -1.06
LRRC28-201ENST00000301981 LONP1P36776 959 aaKnown RBP8.45□□□□□ -1.06
LRRC28-201ENST00000301981 NSRP1Q9H0G5 558 aaKnown RBP8.45□□□□□ -1.06
LRRC28-201ENST00000301981 VPS37BQ9H9H4 285 aa8.45□□□□□ -1.06
LRRC28-201ENST00000301981 AMFRQ9UKV5 643 aa8.45□□□□□ -1.06
LRRC28-201ENST00000301981 GINS2Q9Y248 185 aa8.45□□□□□ -1.06
LRRC28-201ENST00000301981 IKBKGQ9Y6K9 419 aa8.45□□□□□ -1.06
LRRC28-201ENST00000301981 LOC102724428A0A0B4J2F2 783 aa8.44□□□□□ -1.06
LRRC28-201ENST00000301981 CTNND1O60716 968 aaKnown RBP8.44□□□□□ -1.06
LRRC28-201ENST00000301981 KRT15P19012 456 aa8.44□□□□□ -1.06
LRRC28-201ENST00000301981 SIK1P57059 783 aa8.44□□□□□ -1.06
LRRC28-201ENST00000301981 BSPRYQ5W0U4 402 aa8.44□□□□□ -1.06
LRRC28-201ENST00000301981 INTS8Q75QN2 995 aaKnown RBP8.44□□□□□ -1.06
LRRC28-201ENST00000301981 SRLQ86TD4 932 aa8.44□□□□□ -1.06
LRRC28-201ENST00000301981 STIM2Q9P246 746 aa8.44□□□□□ -1.06
LRRC28-201ENST00000301981 SLAIN2Q9P270 581 aa8.44□□□□□ -1.06
LRRC28-201ENST00000301981 TCP10L2B9ZVM9 353 aa8.44□□□□□ -1.06
LRRC28-201ENST00000301981 VEGFAP15692 232 aaPredicted RBP8.44□□□□□ -1.06
LRRC28-201ENST00000301981 STK4Q13043 487 aa8.44□□□□□ -1.06
LRRC28-201ENST00000301981 VWA3BQ502W6 1294 aa8.44□□□□□ -1.06
LRRC28-201ENST00000301981 ELAC2Q9BQ52 826 aaKnown RBP8.44□□□□□ -1.06
LRRC28-201ENST00000301981 MXD3Q9BW11 206 aa8.44□□□□□ -1.06
LRRC28-201ENST00000301981 FUT8Q9BYC5 575 aa8.44□□□□□ -1.06
LRRC28-201ENST00000301981 PRPF3O43395 683 aaKnown RBP8.44□□□□□ -1.06
LRRC28-201ENST00000301981 BEND6Q5SZJ8 279 aaPredicted RBP8.44□□□□□ -1.06
LRRC28-201ENST00000301981 TMTC3Q6ZXV5 915 aa8.44□□□□□ -1.06
LRRC28-201ENST00000301981 SLF2Q8IX21 1173 aa8.44□□□□□ -1.06
LRRC28-201ENST00000301981 ARFGAP2Q8N6H7 521 aa8.44□□□□□ -1.06
LRRC28-201ENST00000301981 HDAC7Q8WUI4 952 aa8.44□□□□□ -1.06
LRRC28-201ENST00000301981 DDX12PQ92771 950 aa8.44□□□□□ -1.06
LRRC28-201ENST00000301981 OSBPL9Q96SU4 736 aa8.44□□□□□ -1.06
LRRC28-201ENST00000301981 ATF7P17544 494 aaPredicted RBP8.44□□□□□ -1.06
LRRC28-201ENST00000301981 PMS1P54277 932 aaKnown RBP8.44□□□□□ -1.06
LRRC28-201ENST00000301981 EXOC3L4Q17RC7 722 aa8.44□□□□□ -1.06
LRRC28-201ENST00000301981 HIBCHQ6NVY1 386 aaPredicted RBP8.44□□□□□ -1.06
LRRC28-201ENST00000301981 CCDC84Q86UT8 332 aaPredicted RBP8.44□□□□□ -1.06
LRRC28-201ENST00000301981 N4BP2L2Q92802 583 aaPredicted RBP8.44□□□□□ -1.06
LRRC28-201ENST00000301981 ZNF804BA4D1E1 1349 aa8.44□□□□□ -1.06
LRRC28-201ENST00000301981 NEXMIFQ5QGS0 1516 aa8.44□□□□□ -1.06
LRRC28-201ENST00000301981 RIMS1Q86UR5 1692 aaKnown RBP8.44□□□□□ -1.06
LRRC28-201ENST00000301981 MYBL1P10243 752 aa8.44□□□□□ -1.06
LRRC28-201ENST00000301981 CETN2P41208 172 aa8.44□□□□□ -1.06
LRRC28-201ENST00000301981 TRAPPC3LQ5T215 181 aa8.44□□□□□ -1.06
LRRC28-201ENST00000301981 EFCC1Q9HA90 598 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms