RNA–Protein interactions for RNA: ENST00000299130.7

BCCIP-202, Transcript of BRCA2 and CDKN1A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene BCCIP, Length 2,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCCIP-202ENST00000299130 JADE2Q9NQC1 790 aa15.14■□□□□ 0.01
BCCIP-202ENST00000299130 CALCOCO1Q9P1Z2 691 aa15.14■□□□□ 0.01
BCCIP-202ENST00000299130 PCDHA13Q9Y5I0 950 aa15.14■□□□□ 0.01
BCCIP-202ENST00000299130 FOCADQ5VW36 1801 aa15.14■□□□□ 0.01
BCCIP-202ENST00000299130 IPO7O95373 1038 aaKnown RBP15.14■□□□□ 0.01
BCCIP-202ENST00000299130 MOCS3O95396 460 aa15.14■□□□□ 0.01
BCCIP-202ENST00000299130 HNRNPH3P31942 346 aaKnown RBP15.14■□□□□ 0.01
BCCIP-202ENST00000299130 KIF11P52732 1056 aa15.14■□□□□ 0.01
BCCIP-202ENST00000299130 KIF5AQ12840 1032 aa15.14■□□□□ 0.01
BCCIP-202ENST00000299130 ORC2Q13416 577 aaPredicted RBP15.14■□□□□ 0.01
BCCIP-202ENST00000299130 MAN2A1Q16706 1144 aa15.14■□□□□ 0.01
BCCIP-202ENST00000299130 ASPRV1Q53RT3 343 aa15.14■□□□□ 0.01
BCCIP-202ENST00000299130 RRAGAQ7L523 313 aa15.14■□□□□ 0.01
BCCIP-202ENST00000299130 TXLNBQ8N3L3 684 aa15.14■□□□□ 0.01
BCCIP-202ENST00000299130 GUF1Q8N442 669 aaKnown RBP15.14■□□□□ 0.01
BCCIP-202ENST00000299130 SECISBP2LQ93073 1101 aaKnown RBP15.14■□□□□ 0.01
BCCIP-202ENST00000299130 CCDC102AQ96A19 550 aa15.14■□□□□ 0.01
BCCIP-202ENST00000299130 EXOC4Q96A65 974 aa15.14■□□□□ 0.01
BCCIP-202ENST00000299130 TRERF1Q96PN7 1200 aa15.14■□□□□ 0.01
BCCIP-202ENST00000299130 USP21Q9UK80 565 aa15.14■□□□□ 0.01
BCCIP-202ENST00000299130 PLIN4Q96Q06 1357 aa15.13■□□□□ 0.01
BCCIP-202ENST00000299130 USP17L10C9JJH3 530 aa15.13■□□□□ 0.01
BCCIP-202ENST00000299130 CLK2P49760 499 aaKnown RBP15.13■□□□□ 0.01
BCCIP-202ENST00000299130 ZNF543Q08ER8 600 aa15.13■□□□□ 0.01
BCCIP-202ENST00000299130 PDIA5Q14554 519 aa15.13■□□□□ 0.01
BCCIP-202ENST00000299130 KCTD1Q719H9 257 aa15.13■□□□□ 0.01
BCCIP-202ENST00000299130 FNBP4Q8N3X1 1017 aaPredicted RBP15.13■□□□□ 0.01
BCCIP-202ENST00000299130 MSL3Q8N5Y2 521 aaKnown RBP15.13■□□□□ 0.01
BCCIP-202ENST00000299130 EHBP1Q8NDI1 1231 aa15.13■□□□□ 0.01
BCCIP-202ENST00000299130 COG1Q8WTW3 980 aa15.13■□□□□ 0.01
BCCIP-202ENST00000299130 BAP1Q92560 729 aa15.13■□□□□ 0.01
BCCIP-202ENST00000299130 DNAJC19Q96DA6 116 aa15.13■□□□□ 0.01
BCCIP-202ENST00000299130 IFIH1Q9BYX4 1025 aaKnown RBP15.13■□□□□ 0.01
BCCIP-202ENST00000299130 GBP3Q9H0R5 595 aa15.13■□□□□ 0.01
BCCIP-202ENST00000299130 RIC8AQ9NPQ8 531 aa15.13■□□□□ 0.01
BCCIP-202ENST00000299130 TBC1D7Q9P0N9 293 aa15.13■□□□□ 0.01
BCCIP-202ENST00000299130 SALL4Q9UJQ4 1053 aa15.13■□□□□ 0.01
BCCIP-202ENST00000299130 EIF3JO75822 258 aaKnown RBP15.12■□□□□ 0.01
BCCIP-202ENST00000299130 KCNMA1Q12791 1236 aa15.12■□□□□ 0.01
BCCIP-202ENST00000299130 SPA17Q15506 151 aa15.12■□□□□ 0.01
BCCIP-202ENST00000299130 KRT79Q5XKE5 535 aa15.12■□□□□ 0.01
BCCIP-202ENST00000299130 SLF2Q8IX21 1173 aa15.12■□□□□ 0.01
BCCIP-202ENST00000299130 CAGE1Q8TC20 777 aa15.12■□□□□ 0.01
BCCIP-202ENST00000299130 SH2D4AQ9H788 454 aa15.12■□□□□ 0.01
BCCIP-202ENST00000299130 SMARCAL1Q9NZC9 954 aa15.12■□□□□ 0.01
BCCIP-202ENST00000299130 THSD7AQ9UPZ6 1657 aa15.12■□□□□ 0.01
BCCIP-202ENST00000299130 PNMA6FA0A0J9YX94 578 aa15.12■□□□□ 0.01
BCCIP-202ENST00000299130 hCG_1984214I3L0E3 225 aa15.12■□□□□ 0.01
BCCIP-202ENST00000299130 SCNN1DP51172 638 aa15.12■□□□□ 0.01
BCCIP-202ENST00000299130 MRPS25P82663 173 aaKnown RBP15.12■□□□□ 0.01
BCCIP-202ENST00000299130 APBA1Q02410 837 aa15.12■□□□□ 0.01
BCCIP-202ENST00000299130 CACNB1Q02641 598 aaPredicted RBP15.12■□□□□ 0.01
BCCIP-202ENST00000299130 DDR1Q08345 913 aa15.12■□□□□ 0.01
BCCIP-202ENST00000299130 COASYQ13057 564 aa15.12■□□□□ 0.01
BCCIP-202ENST00000299130 GPS2Q13227 327 aa15.12■□□□□ 0.01
BCCIP-202ENST00000299130 EZH2Q15910 746 aaKnown RBP15.12■□□□□ 0.01
BCCIP-202ENST00000299130 SHROOM1Q2M3G4 852 aaPredicted RBP15.12■□□□□ 0.01
BCCIP-202ENST00000299130 CREG2Q8IUH2 290 aa15.12■□□□□ 0.01
BCCIP-202ENST00000299130 ANKRD13CQ8N6S4 541 aa15.12■□□□□ 0.01
BCCIP-202ENST00000299130 ZNF713Q8N859 430 aaPredicted RBP15.12■□□□□ 0.01
BCCIP-202ENST00000299130 TBC1D22AQ8WUA7 517 aa15.12■□□□□ 0.01
BCCIP-202ENST00000299130 KANSL2Q9H9L4 492 aa15.12■□□□□ 0.01
BCCIP-202ENST00000299130 DDX25Q9UHL0 483 aaKnown RBP15.12■□□□□ 0.01
BCCIP-202ENST00000299130 NPHP3-ACAD11A0A0J9YXS1 232 aa15.11■□□□□ 0.01
BCCIP-202ENST00000299130 ANO9A1A5B4 782 aa15.11■□□□□ 0.01
BCCIP-202ENST00000299130 BBOX1O75936 387 aa15.11■□□□□ 0.01
BCCIP-202ENST00000299130 TTLL1O95922 423 aa15.11■□□□□ 0.01
BCCIP-202ENST00000299130 SHMT1P34896 483 aa15.11■□□□□ 0.01
BCCIP-202ENST00000299130 TNNT3P45378 269 aaPredicted RBP15.11■□□□□ 0.01
BCCIP-202ENST00000299130 PSMB7Q99436 277 aa15.11■□□□□ 0.01
BCCIP-202ENST00000299130 EHD2Q9NZN4 543 aa15.11■□□□□ 0.01
BCCIP-202ENST00000299130 SNX12Q9UMY4 172 aa15.11■□□□□ 0.01
BCCIP-202ENST00000299130 ADAMTSL1Q8N6G6 1762 aa15.11■□□□□ 0.01
BCCIP-202ENST00000299130 MYH7BA7E2Y1 1941 aa15.11■□□□□ 0.01
BCCIP-202ENST00000299130 E9PMD0 336 aa15.11■□□□□ 0.01
BCCIP-202ENST00000299130 SYF2O95926 243 aaKnown RBP15.11■□□□□ 0.01
BCCIP-202ENST00000299130 TUBBP07437 444 aa15.11■□□□□ 0.01
BCCIP-202ENST00000299130 CXCR5P32302 372 aa15.11■□□□□ 0.01
BCCIP-202ENST00000299130 CKAP4Q07065 602 aaKnown RBP15.11■□□□□ 0.01
BCCIP-202ENST00000299130 PPP4R3AQ6IN85 833 aa15.11■□□□□ 0.01
BCCIP-202ENST00000299130 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.11■□□□□ 0.01
BCCIP-202ENST00000299130 HDAC7Q8WUI4 952 aa15.11■□□□□ 0.01
BCCIP-202ENST00000299130 PSD3Q9NYI0 1048 aa15.11■□□□□ 0.01
BCCIP-202ENST00000299130 ZC3H4Q9UPT8 1303 aaKnown RBP15.11■□□□□ 0.01
BCCIP-202ENST00000299130 NCK2O43639 380 aa15.1■□□□□ 0.01
BCCIP-202ENST00000299130 LCA5LO95447 670 aa15.1■□□□□ 0.01
BCCIP-202ENST00000299130 SSBP05455 408 aaKnown RBP eCLIP15.1■□□□□ 0.01
BCCIP-202ENST00000299130 LRRC63Q05C16 580 aa15.1■□□□□ 0.01
BCCIP-202ENST00000299130 GFPT1Q06210 699 aaPredicted RBP15.1■□□□□ 0.01
BCCIP-202ENST00000299130 ZSCAN26Q16670 478 aa15.1■□□□□ 0.01
BCCIP-202ENST00000299130 ZCWPW2Q504Y3 356 aa15.1■□□□□ 0.01
BCCIP-202ENST00000299130 NFRKBQ6P4R8 1299 aa15.1■□□□□ 0.01
BCCIP-202ENST00000299130 ZFPM1Q8IX07 1006 aa15.1■□□□□ 0.01
BCCIP-202ENST00000299130 RIN2Q8WYP3 895 aaPredicted RBP15.1■□□□□ 0.01
BCCIP-202ENST00000299130 TANGO6Q9C0B7 1094 aa15.1■□□□□ 0.01
BCCIP-202ENST00000299130 DEF6Q9H4E7 631 aa15.1■□□□□ 0.01
BCCIP-202ENST00000299130 NLRC4Q9NPP4 1024 aa15.1■□□□□ 0.01
BCCIP-202ENST00000299130 USP40Q9NVE5 1235 aa15.1■□□□□ 0.01
BCCIP-202ENST00000299130 SERPINB13Q9UIV8 391 aa15.1■□□□□ 0.01
BCCIP-202ENST00000299130 HPCAL4Q9UM19 191 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms