RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 KCNMB3Q9NPA1 279 aa23.98■■□□□ 1.43
SOX17-201ENST00000297316 MRPL11Q9Y3B7 192 aaKnown RBP23.98■■□□□ 1.43
SOX17-201ENST00000297316 GCOM1H8Y6P7 765 aaPredicted RBP23.97■■□□□ 1.43
SOX17-201ENST00000297316 POLR2MP0CAP2 368 aa23.97■■□□□ 1.43
SOX17-201ENST00000297316 DHX8Q14562 1220 aaKnown RBP23.97■■□□□ 1.43
SOX17-201ENST00000297316 CT47A1Q5JQC4 288 aaPredicted RBP23.97■■□□□ 1.43
SOX17-201ENST00000297316 VSTM4Q8IW00 320 aa23.97■■□□□ 1.43
SOX17-201ENST00000297316 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.97■■□□□ 1.43
SOX17-201ENST00000297316 HOMER2Q9NSB8 354 aa23.97■■□□□ 1.43
SOX17-201ENST00000297316 PCDHA12Q9UN75 941 aa23.97■■□□□ 1.43
SOX17-201ENST00000297316 RLFQ13129 1914 aa23.97■■□□□ 1.43
SOX17-201ENST00000297316 COL11A1P12107 1806 aaPredicted RBP23.97■■□□□ 1.43
SOX17-201ENST00000297316 NFIBO00712 420 aa23.96■■□□□ 1.43
SOX17-201ENST00000297316 CDK11BP21127 795 aaKnown RBP23.96■■□□□ 1.43
SOX17-201ENST00000297316 GPR162Q16538 588 aa23.96■■□□□ 1.43
SOX17-201ENST00000297316 ECM1Q16610 540 aa23.96■■□□□ 1.43
SOX17-201ENST00000297316 DNTTIP2Q5QJE6 756 aaKnown RBP23.96■■□□□ 1.43
SOX17-201ENST00000297316 ZNF658Q5TYW1 1059 aaPredicted RBP23.96■■□□□ 1.43
SOX17-201ENST00000297316 APTXQ7Z2E3 356 aaKnown RBP23.96■■□□□ 1.43
SOX17-201ENST00000297316 AS3MTQ9HBK9 375 aa23.96■■□□□ 1.43
SOX17-201ENST00000297316 PPP1R9AQ9ULJ8 1098 aa23.96■■□□□ 1.43
SOX17-201ENST00000297316 MAPK8IP1Q9UQF2 711 aa23.96■■□□□ 1.43
SOX17-201ENST00000297316 OTOFQ9HC10 1997 aa23.96■■□□□ 1.43
SOX17-201ENST00000297316 USP14P54578 494 aa23.96■■□□□ 1.43
SOX17-201ENST00000297316 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.96■■□□□ 1.43
SOX17-201ENST00000297316 SULF1Q8IWU6 871 aa23.96■■□□□ 1.43
SOX17-201ENST00000297316 CNKSR2Q8WXI2 1034 aa23.96■■□□□ 1.43
SOX17-201ENST00000297316 SLC38A10Q9HBR0 1119 aa23.96■■□□□ 1.43
SOX17-201ENST00000297316 ABCB11O95342 1321 aa23.96■■□□□ 1.43
SOX17-201ENST00000297316 STAT3P40763 770 aa23.95■■□□□ 1.43
SOX17-201ENST00000297316 GOLGA8FQ08AF8 430 aa23.95■■□□□ 1.43
SOX17-201ENST00000297316 GOLGA8DPQ0D2H9 430 aa23.95■■□□□ 1.43
SOX17-201ENST00000297316 PDIA5Q14554 519 aa23.95■■□□□ 1.43
SOX17-201ENST00000297316 KMT5BQ4FZB7 885 aa23.95■■□□□ 1.43
SOX17-201ENST00000297316 SNX29Q8TEQ0 813 aa23.95■■□□□ 1.43
SOX17-201ENST00000297316 ATG4CQ96DT6 458 aa23.95■■□□□ 1.43
SOX17-201ENST00000297316 ALAS1P13196 640 aa23.95■■□□□ 1.42
SOX17-201ENST00000297316 TRAF1Q13077 416 aa23.95■■□□□ 1.42
SOX17-201ENST00000297316 SLC30A10Q6XR72 485 aa23.95■■□□□ 1.42
SOX17-201ENST00000297316 KRT26Q7Z3Y9 468 aa23.95■■□□□ 1.42
SOX17-201ENST00000297316 ETNPPLQ8TBG4 499 aa23.95■■□□□ 1.42
SOX17-201ENST00000297316 UQCRHLA0A096LP55 91 aa23.94■■□□□ 1.42
SOX17-201ENST00000297316 USP27XA6NNY8 438 aa23.94■■□□□ 1.42
SOX17-201ENST00000297316 UQCRHP07919 91 aa23.94■■□□□ 1.42
SOX17-201ENST00000297316 PRCPP42785 496 aa23.94■■□□□ 1.42
SOX17-201ENST00000297316 VGLL4Q14135 290 aa23.94■■□□□ 1.42
SOX17-201ENST00000297316 MUM1L1Q5H9M0 696 aa23.94■■□□□ 1.42
SOX17-201ENST00000297316 CDKAL1Q5VV42 579 aa23.94■■□□□ 1.42
SOX17-201ENST00000297316 DPY19L2Q6NUT2 758 aa23.94■■□□□ 1.42
SOX17-201ENST00000297316 KCNK18Q7Z418 384 aa23.94■■□□□ 1.42
SOX17-201ENST00000297316 CLEC4DQ8WXI8 215 aa23.94■■□□□ 1.42
SOX17-201ENST00000297316 CALML4Q96GE6 196 aa23.94■■□□□ 1.42
SOX17-201ENST00000297316 NAP1L4Q99733 375 aaKnown RBP23.94■■□□□ 1.42
SOX17-201ENST00000297316 BLOC1S4Q9NUP1 217 aa23.94■■□□□ 1.42
SOX17-201ENST00000297316 RMND1Q9NWS8 449 aa23.94■■□□□ 1.42
SOX17-201ENST00000297316 MCTP2Q6DN12 878 aa23.94■■□□□ 1.42
SOX17-201ENST00000297316 COL20A1Q9P218 1284 aa23.94■■□□□ 1.42
SOX17-201ENST00000297316 SNCAIPQ9Y6H5 919 aa23.94■■□□□ 1.42
SOX17-201ENST00000297316 MOXD1Q6UVY6 613 aa23.93■■□□□ 1.42
SOX17-201ENST00000297316 CCDC150Q8NCX0 1101 aa23.93■■□□□ 1.42
SOX17-201ENST00000297316 RAB34Q9BZG1 259 aa23.93■■□□□ 1.42
SOX17-201ENST00000297316 WDR90Q96KV7 1748 aa23.93■■□□□ 1.42
SOX17-201ENST00000297316 ZNF76P36508 570 aa23.93■■□□□ 1.42
SOX17-201ENST00000297316 Q4G0T1 1027 aa23.93■■□□□ 1.42
SOX17-201ENST00000297316 MOB2Q70IA6 237 aa23.93■■□□□ 1.42
SOX17-201ENST00000297316 CUEDC2Q9H467 287 aa23.93■■□□□ 1.42
SOX17-201ENST00000297316 AFG3L2Q9Y4W6 797 aa23.93■■□□□ 1.42
SOX17-201ENST00000297316 MSH4O15457 936 aa23.92■■□□□ 1.42
SOX17-201ENST00000297316 CIITAP33076 1130 aa23.92■■□□□ 1.42
SOX17-201ENST00000297316 GLIPR1L2Q4G1C9 344 aa23.92■■□□□ 1.42
SOX17-201ENST00000297316 NOL9Q5SY16 702 aaKnown RBP23.92■■□□□ 1.42
SOX17-201ENST00000297316 KRT79Q5XKE5 535 aa23.92■■□□□ 1.42
SOX17-201ENST00000297316 NELFBQ8WX92 580 aa23.92■■□□□ 1.42
SOX17-201ENST00000297316 TRIM9Q9C026 710 aa23.92■■□□□ 1.42
SOX17-201ENST00000297316 VWA5AO00534 786 aa23.92■■□□□ 1.42
SOX17-201ENST00000297316 SFPQP23246 707 aaKnown RBP eCLIP23.92■■□□□ 1.42
SOX17-201ENST00000297316 EPHX2P34913 555 aa23.92■■□□□ 1.42
SOX17-201ENST00000297316 PAK1Q13153 545 aa23.92■■□□□ 1.42
SOX17-201ENST00000297316 MCM6Q14566 821 aa23.92■■□□□ 1.42
SOX17-201ENST00000297316 KCNB1Q14721 858 aa23.92■■□□□ 1.42
SOX17-201ENST00000297316 CDK5RAP3Q96JB5 506 aa23.92■■□□□ 1.42
SOX17-201ENST00000297316 RWDD2AQ9UIY3 292 aa23.92■■□□□ 1.42
SOX17-201ENST00000297316 PTPRFP10586 1907 aa23.91■■□□□ 1.42
SOX17-201ENST00000297316 PAPPA2Q9BXP8 1791 aa23.91■■□□□ 1.42
SOX17-201ENST00000297316 IGLV3-22A0A075B6J6 115 aa23.91■■□□□ 1.42
SOX17-201ENST00000297316 A0A1B0GTH6 734 aa23.91■■□□□ 1.42
SOX17-201ENST00000297316 TEX33O43247 280 aa23.91■■□□□ 1.42
SOX17-201ENST00000297316 CYP3A4P08684 503 aa23.91■■□□□ 1.42
SOX17-201ENST00000297316 RBM10P98175 930 aaKnown RBP23.91■■□□□ 1.42
SOX17-201ENST00000297316 NR1I3Q14994 352 aa23.91■■□□□ 1.42
SOX17-201ENST00000297316 L3MBTL3Q96JM7 780 aaPredicted RBP23.91■■□□□ 1.42
SOX17-201ENST00000297316 PDCL3Q9H2J4 239 aa23.91■■□□□ 1.42
SOX17-201ENST00000297316 RHOBTB3O94955 611 aa23.9■■□□□ 1.42
SOX17-201ENST00000297316 SPIRE1Q08AE8 756 aa23.9■■□□□ 1.42
SOX17-201ENST00000297316 ADSSL1Q8N142 457 aa23.9■■□□□ 1.42
SOX17-201ENST00000297316 MAGEF1Q9HAY2 307 aa23.9■■□□□ 1.42
SOX17-201ENST00000297316 RIPK3Q9Y572 518 aa23.9■■□□□ 1.42
SOX17-201ENST00000297316 TRIM49BA6NDI0 452 aa23.9■■□□□ 1.42
SOX17-201ENST00000297316 MYL1P05976 194 aa23.9■■□□□ 1.42
SOX17-201ENST00000297316 HSD17B4P51659 736 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms