RNA–Protein interactions for RNA: ENST00000296254.3

TMEM41A-201, Transcript of transmembrane protein 41A, humanhuman

TSL 2 BASIC

Gene TMEM41A, Length 1,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41A-201ENST00000296254 KIAA1217Q5T5P2 1943 aa18.66■□□□□ 0.58
TMEM41A-201ENST00000296254 B4E1Z4 1266 aa18.66■□□□□ 0.58
TMEM41A-201ENST00000296254 COL9A1P20849 921 aa18.66■□□□□ 0.58
TMEM41A-201ENST00000296254 STXBP2Q15833 593 aa18.66■□□□□ 0.58
TMEM41A-201ENST00000296254 AAK1Q2M2I8 961 aa18.66■□□□□ 0.58
TMEM41A-201ENST00000296254 CWC27Q6UX04 472 aaKnown RBP18.66■□□□□ 0.58
TMEM41A-201ENST00000296254 PLEKHM2Q8IWE5 1019 aa18.66■□□□□ 0.58
TMEM41A-201ENST00000296254 DHX38Q92620 1227 aaKnown RBP18.66■□□□□ 0.58
TMEM41A-201ENST00000296254 EMID1Q96A84 441 aaPredicted RBP18.66■□□□□ 0.58
TMEM41A-201ENST00000296254 OSBPL3Q9H4L5 887 aa18.66■□□□□ 0.58
TMEM41A-201ENST00000296254 DIAPH3Q9NSV4 1193 aa18.66■□□□□ 0.58
TMEM41A-201ENST00000296254 MRPL11Q9Y3B7 192 aaKnown RBP18.66■□□□□ 0.58
TMEM41A-201ENST00000296254 PTPRSQ13332 1948 aa18.66■□□□□ 0.58
TMEM41A-201ENST00000296254 COL4A4P53420 1690 aaPredicted RBP18.66■□□□□ 0.58
TMEM41A-201ENST00000296254 KIF28PB7ZC32 967 aa18.65■□□□□ 0.58
TMEM41A-201ENST00000296254 BMP1P13497 986 aa18.65■□□□□ 0.58
TMEM41A-201ENST00000296254 SELPP16109 830 aa18.65■□□□□ 0.58
TMEM41A-201ENST00000296254 CASTP20810 708 aaKnown RBP18.65■□□□□ 0.58
TMEM41A-201ENST00000296254 KCNJ6P48051 423 aa18.65■□□□□ 0.58
TMEM41A-201ENST00000296254 WDR5P61964 334 aaKnown RBP18.65■□□□□ 0.58
TMEM41A-201ENST00000296254 AAMPQ13685 434 aa18.65■□□□□ 0.58
TMEM41A-201ENST00000296254 GPNMBQ14956 572 aa18.65■□□□□ 0.58
TMEM41A-201ENST00000296254 SKIV2LQ15477 1246 aaKnown RBP18.65■□□□□ 0.58
TMEM41A-201ENST00000296254 DGKDQ16760 1214 aa18.65■□□□□ 0.58
TMEM41A-201ENST00000296254 LRRC8DQ7L1W4 858 aa18.65■□□□□ 0.58
TMEM41A-201ENST00000296254 CHST3Q7LGC8 479 aa18.65■□□□□ 0.58
TMEM41A-201ENST00000296254 FBXO11Q86XK2 927 aa18.65■□□□□ 0.58
TMEM41A-201ENST00000296254 ARNTL2Q8WYA1 636 aa18.65■□□□□ 0.58
TMEM41A-201ENST00000296254 NECAB3Q96P71 396 aaPredicted RBP18.65■□□□□ 0.58
TMEM41A-201ENST00000296254 DSCC1Q9BVC3 393 aa18.65■□□□□ 0.58
TMEM41A-201ENST00000296254 JMJD4Q9H9V9 463 aa18.65■□□□□ 0.58
TMEM41A-201ENST00000296254 GTF2IRD1Q9UHL9 959 aa18.65■□□□□ 0.58
TMEM41A-201ENST00000296254 TLL1O43897 1013 aa18.64■□□□□ 0.57
TMEM41A-201ENST00000296254 DHX16O60231 1041 aaKnown RBP18.64■□□□□ 0.57
TMEM41A-201ENST00000296254 F2P00734 622 aa18.64■□□□□ 0.57
TMEM41A-201ENST00000296254 PARP1P09874 1014 aaKnown RBP18.64■□□□□ 0.57
TMEM41A-201ENST00000296254 EIF2AK2P19525 551 aaKnown RBP18.64■□□□□ 0.57
TMEM41A-201ENST00000296254 GHRHRQ02643 423 aa18.64■□□□□ 0.57
TMEM41A-201ENST00000296254 ARHGEF16Q5VV41 709 aa18.64■□□□□ 0.57
TMEM41A-201ENST00000296254 KRT40Q6A162 431 aa18.64■□□□□ 0.57
TMEM41A-201ENST00000296254 B4GALNT3Q6L9W6 998 aa18.64■□□□□ 0.57
TMEM41A-201ENST00000296254 CHD1LQ86WJ1 897 aa18.64■□□□□ 0.57
TMEM41A-201ENST00000296254 PPTC7Q8NI37 304 aa18.64■□□□□ 0.57
TMEM41A-201ENST00000296254 KATNAL1Q9BW62 490 aa18.64■□□□□ 0.57
TMEM41A-201ENST00000296254 PXMP2Q9NR77 195 aa18.64■□□□□ 0.57
TMEM41A-201ENST00000296254 ZSWIM5Q9P217 1185 aa18.64■□□□□ 0.57
TMEM41A-201ENST00000296254 DDX41Q9UJV9 622 aaKnown RBP18.64■□□□□ 0.57
TMEM41A-201ENST00000296254 MYH6P13533 1939 aa18.63■□□□□ 0.57
TMEM41A-201ENST00000296254 TRIP12Q14669 1992 aaPredicted RBP18.63■□□□□ 0.57
TMEM41A-201ENST00000296254 HIP1O00291 1037 aa18.63■□□□□ 0.57
TMEM41A-201ENST00000296254 OPLAHO14841 1288 aa18.63■□□□□ 0.57
TMEM41A-201ENST00000296254 EIF3JO75822 258 aaKnown RBP18.63■□□□□ 0.57
TMEM41A-201ENST00000296254 PARNO95453 639 aaKnown RBP18.63■□□□□ 0.57
TMEM41A-201ENST00000296254 CXCL10P02778 98 aa18.63■□□□□ 0.57
TMEM41A-201ENST00000296254 KCNQ1P51787 676 aa18.63■□□□□ 0.57
TMEM41A-201ENST00000296254 NUCB1Q02818 461 aa18.63■□□□□ 0.57
TMEM41A-201ENST00000296254 IMMTQ16891 758 aaKnown RBP18.63■□□□□ 0.57
TMEM41A-201ENST00000296254 CNKSR3Q6P9H4 555 aa18.63■□□□□ 0.57
TMEM41A-201ENST00000296254 SPRED2Q7Z698 418 aa18.63■□□□□ 0.57
TMEM41A-201ENST00000296254 MRVI1Q9Y6F6 885 aa18.63■□□□□ 0.57
TMEM41A-201ENST00000296254 LCHNA4D1U4 455 aa18.62■□□□□ 0.57
TMEM41A-201ENST00000296254 NBNO60934 754 aa18.62■□□□□ 0.57
TMEM41A-201ENST00000296254 NR3C2P08235 984 aa18.62■□□□□ 0.57
TMEM41A-201ENST00000296254 ZNF286BP0CG31 522 aa18.62■□□□□ 0.57
TMEM41A-201ENST00000296254 CKBP12277 381 aa18.62■□□□□ 0.57
TMEM41A-201ENST00000296254 HOXD8P13378 290 aaPredicted RBP18.62■□□□□ 0.57
TMEM41A-201ENST00000296254 PSEN2P49810 448 aa18.62■□□□□ 0.57
TMEM41A-201ENST00000296254 HSD17B4P51659 736 aa18.62■□□□□ 0.57
TMEM41A-201ENST00000296254 DEFB103AP81534 67 aa18.62■□□□□ 0.57
TMEM41A-201ENST00000296254 GRB10Q13322 594 aa18.62■□□□□ 0.57
TMEM41A-201ENST00000296254 C7orf31Q8N865 590 aa18.62■□□□□ 0.57
TMEM41A-201ENST00000296254 UBAC1Q9BSL1 405 aa18.62■□□□□ 0.57
TMEM41A-201ENST00000296254 AMNQ9BXJ7 453 aa18.62■□□□□ 0.57
TMEM41A-201ENST00000296254 KRT23Q9C075 422 aa18.62■□□□□ 0.57
TMEM41A-201ENST00000296254 RWDD1Q9H446 243 aaPredicted RBP18.62■□□□□ 0.57
TMEM41A-201ENST00000296254 HDAC6Q9UBN7 1215 aa18.62■□□□□ 0.57
TMEM41A-201ENST00000296254 COG5Q9UP83 839 aa18.62■□□□□ 0.57
TMEM41A-201ENST00000296254 TCF20Q9UGU0 1960 aaKnown RBP18.61■□□□□ 0.57
TMEM41A-201ENST00000296254 HAS3O00219 553 aa18.61■□□□□ 0.57
TMEM41A-201ENST00000296254 LPXNO60711 386 aa18.61■□□□□ 0.57
TMEM41A-201ENST00000296254 CFBP00751 764 aa18.61■□□□□ 0.57
TMEM41A-201ENST00000296254 LAMC2Q13753 1193 aa18.61■□□□□ 0.57
TMEM41A-201ENST00000296254 MFSD10Q14728 455 aa18.61■□□□□ 0.57
TMEM41A-201ENST00000296254 IFIT1BQ5T764 474 aaKnown RBP18.61■□□□□ 0.57
TMEM41A-201ENST00000296254 TMCO2Q7Z6W1 182 aaPredicted RBP18.61■□□□□ 0.57
TMEM41A-201ENST00000296254 STAG2Q8N3U4 1231 aa18.61■□□□□ 0.57
TMEM41A-201ENST00000296254 CNNM2Q9H8M5 875 aa18.61■□□□□ 0.57
TMEM41A-201ENST00000296254 VAT1LQ9HCJ6 419 aa18.61■□□□□ 0.57
TMEM41A-201ENST00000296254 PPP1R11O60927 126 aaPredicted RBP18.6■□□□□ 0.57
TMEM41A-201ENST00000296254 RGS20O76081 388 aa18.6■□□□□ 0.57
TMEM41A-201ENST00000296254 PTK7Q13308 1070 aa18.6■□□□□ 0.57
TMEM41A-201ENST00000296254 KIAA0753Q2KHM9 967 aa18.6■□□□□ 0.57
TMEM41A-201ENST00000296254 TCTN1Q2MV58 587 aa18.6■□□□□ 0.57
TMEM41A-201ENST00000296254 TRIM71Q2Q1W2 868 aaKnown RBP18.6■□□□□ 0.57
TMEM41A-201ENST00000296254 TRAF7Q6Q0C0 670 aa18.6■□□□□ 0.57
TMEM41A-201ENST00000296254 WNT8BQ93098 351 aa18.6■□□□□ 0.57
TMEM41A-201ENST00000296254 MTMR8Q96EF0 704 aa18.6■□□□□ 0.57
TMEM41A-201ENST00000296254 PDCD2LQ9BRP1 358 aa18.6■□□□□ 0.57
TMEM41A-201ENST00000296254 ALG1Q9BT22 464 aa18.6■□□□□ 0.57
TMEM41A-201ENST00000296254 CTNNA3Q9UI47 895 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms