RNA–Protein interactions for RNA: ENST00000295767.9

CHCHD4-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

TSL 2 BASIC

Gene CHCHD4, Length 1,603 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-201ENST00000295767 MYSM1Q5VVJ2 828 aa31.58■■■□□ 2.65
CHCHD4-201ENST00000295767 FAM173BQ6P4H8 233 aa31.58■■■□□ 2.65
CHCHD4-201ENST00000295767 MSL3Q8N5Y2 521 aaKnown RBP31.58■■■□□ 2.65
CHCHD4-201ENST00000295767 RAET1EQ8TD07 263 aa31.58■■■□□ 2.65
CHCHD4-201ENST00000295767 SYNGAP1Q96PV0 1343 aa31.57■■■□□ 2.65
CHCHD4-201ENST00000295767 IGHA2P01877 340 aa31.57■■■□□ 2.64
CHCHD4-201ENST00000295767 TOB1P50616 345 aaPredicted RBP31.57■■■□□ 2.64
CHCHD4-201ENST00000295767 STXBP2Q15833 593 aa31.57■■■□□ 2.64
CHCHD4-201ENST00000295767 LETM2Q2VYF4 491 aa31.57■■■□□ 2.64
CHCHD4-201ENST00000295767 XRRA1Q6P2D8 792 aa31.57■■■□□ 2.64
CHCHD4-201ENST00000295767 NOL7Q9UMY1 257 aaKnown RBP31.57■■■□□ 2.64
CHCHD4-201ENST00000295767 ATP2B1P20020 1258 aa31.57■■■□□ 2.64
CHCHD4-201ENST00000295767 CDKN2AIPQ9NXV6 580 aaPredicted RBP31.57■■■□□ 2.64
CHCHD4-201ENST00000295767 RTEL1Q9NZ71 1219 aa31.57■■■□□ 2.64
CHCHD4-201ENST00000295767 CHMP5Q9NZZ3 219 aa31.57■■■□□ 2.64
CHCHD4-201ENST00000295767 SNAI1O95863 264 aaPredicted RBP31.56■■■□□ 2.64
CHCHD4-201ENST00000295767 ELNP15502 786 aa31.56■■■□□ 2.64
CHCHD4-201ENST00000295767 PTCH2Q9Y6C5 1203 aa31.56■■■□□ 2.64
CHCHD4-201ENST00000295767 ADCY3O60266 1144 aa31.55■■■□□ 2.64
CHCHD4-201ENST00000295767 TDP2O95551 362 aa31.55■■■□□ 2.64
CHCHD4-201ENST00000295767 CIITAP33076 1130 aa31.55■■■□□ 2.64
CHCHD4-201ENST00000295767 CYP2C19P33261 490 aa31.55■■■□□ 2.64
CHCHD4-201ENST00000295767 TRAPPC10P48553 1259 aa31.55■■■□□ 2.64
CHCHD4-201ENST00000295767 NBR1Q14596 966 aa31.55■■■□□ 2.64
CHCHD4-201ENST00000295767 RILPL1Q5EBL4 403 aa31.55■■■□□ 2.64
CHCHD4-201ENST00000295767 EEPD1Q7L9B9 569 aa31.55■■■□□ 2.64
CHCHD4-201ENST00000295767 TRMT44Q8IYL2 757 aaKnown RBP31.55■■■□□ 2.64
CHCHD4-201ENST00000295767 TCHHQ07283 1943 aa31.54■■■□□ 2.64
CHCHD4-201ENST00000295767 FAM86B1E9PN63 330 aa31.54■■■□□ 2.64
CHCHD4-201ENST00000295767 FAM86B2P0C5J1 330 aa31.54■■■□□ 2.64
CHCHD4-201ENST00000295767 ZNF76P36508 570 aa31.54■■■□□ 2.64
CHCHD4-201ENST00000295767 CTU1Q7Z7A3 348 aaKnown RBP31.54■■■□□ 2.64
CHCHD4-201ENST00000295767 CYP2W1Q8TAV3 490 aa31.54■■■□□ 2.64
CHCHD4-201ENST00000295767 PTPN22Q9Y2R2 807 aa31.54■■■□□ 2.64
CHCHD4-201ENST00000295767 UBIAD1Q9Y5Z9 338 aa31.54■■■□□ 2.64
CHCHD4-201ENST00000295767 CCNT1O60563 726 aaKnown RBP31.53■■■□□ 2.64
CHCHD4-201ENST00000295767 EIF3JO75822 258 aaKnown RBP31.53■■■□□ 2.64
CHCHD4-201ENST00000295767 TTC38Q5R3I4 469 aa31.53■■■□□ 2.64
CHCHD4-201ENST00000295767 FBXO16Q8IX29 292 aaPredicted RBP31.53■■■□□ 2.64
CHCHD4-201ENST00000295767 MXRA8Q9BRK3 442 aa31.53■■■□□ 2.64
CHCHD4-201ENST00000295767 HTTP42858 3142 aa31.53■■■□□ 2.64
CHCHD4-201ENST00000295767 STAM2O75886 525 aa31.53■■■□□ 2.64
CHCHD4-201ENST00000295767 RGS20O76081 388 aa31.53■■■□□ 2.64
CHCHD4-201ENST00000295767 ITGB5P18084 799 aa31.53■■■□□ 2.64
CHCHD4-201ENST00000295767 CEP55Q53EZ4 464 aa31.53■■■□□ 2.64
CHCHD4-201ENST00000295767 MOXD1Q6UVY6 613 aa31.53■■■□□ 2.64
CHCHD4-201ENST00000295767 PXYLP1Q8TE99 480 aa31.53■■■□□ 2.64
CHCHD4-201ENST00000295767 INPP4AQ96PE3 977 aaPredicted RBP31.53■■■□□ 2.64
CHCHD4-201ENST00000295767 KATNBL1Q9H079 304 aa31.53■■■□□ 2.64
CHCHD4-201ENST00000295767 IGLV3-22A0A075B6J6 115 aa31.52■■■□□ 2.64
CHCHD4-201ENST00000295767 FOXD4L6Q3SYB3 417 aaPredicted RBP31.52■■■□□ 2.64
CHCHD4-201ENST00000295767 PPP4R3AQ6IN85 833 aa31.52■■■□□ 2.64
CHCHD4-201ENST00000295767 FOXD4L3Q6VB84 417 aaPredicted RBP31.52■■■□□ 2.64
CHCHD4-201ENST00000295767 PCDHB6Q9Y5E3 794 aa31.52■■■□□ 2.64
CHCHD4-201ENST00000295767 DOCK5Q9H7D0 1870 aa31.52■■■□□ 2.64
CHCHD4-201ENST00000295767 CYP3A7-CYP3A51PA0A087WV96 503 aa31.51■■■□□ 2.63
CHCHD4-201ENST00000295767 CYP3A7P24462 503 aa31.51■■■□□ 2.63
CHCHD4-201ENST00000295767 MFSD14CQ5VZR4 134 aa31.51■■■□□ 2.63
CHCHD4-201ENST00000295767 MBOAT7Q96N66 472 aa31.51■■■□□ 2.63
CHCHD4-201ENST00000295767 NAP1L4Q99733 375 aaKnown RBP31.51■■■□□ 2.63
CHCHD4-201ENST00000295767 WDR11Q9BZH6 1224 aa31.51■■■□□ 2.63
CHCHD4-201ENST00000295767 GCFC2P16383 781 aaKnown RBP31.5■■■□□ 2.63
CHCHD4-201ENST00000295767 TRIM32Q13049 653 aa31.5■■■□□ 2.63
CHCHD4-201ENST00000295767 PRR16Q569H4 304 aa31.5■■■□□ 2.63
CHCHD4-201ENST00000295767 SLAIN1Q8ND83 568 aa31.5■■■□□ 2.63
CHCHD4-201ENST00000295767 LENG9Q96B70 501 aa31.5■■■□□ 2.63
CHCHD4-201ENST00000295767 ABHD16BQ9H3Z7 469 aa31.5■■■□□ 2.63
CHCHD4-201ENST00000295767 VTA1Q9NP79 307 aa31.5■■■□□ 2.63
CHCHD4-201ENST00000295767 JADE2Q9NQC1 790 aa31.5■■■□□ 2.63
CHCHD4-201ENST00000295767 CNPY2Q9Y2B0 182 aa31.5■■■□□ 2.63
CHCHD4-201ENST00000295767 MEIS1O00470 390 aa31.49■■■□□ 2.63
CHCHD4-201ENST00000295767 SLC37A4O43826 429 aa31.49■■■□□ 2.63
CHCHD4-201ENST00000295767 MCM7P33993 719 aa31.49■■■□□ 2.63
CHCHD4-201ENST00000295767 ZNF174Q15697 407 aa31.49■■■□□ 2.63
CHCHD4-201ENST00000295767 PRAMEF19Q5SWL8 479 aa31.49■■■□□ 2.63
CHCHD4-201ENST00000295767 SEPT14Q6ZU15 432 aa31.49■■■□□ 2.63
CHCHD4-201ENST00000295767 DDX25Q9UHL0 483 aaKnown RBP31.49■■■□□ 2.63
CHCHD4-201ENST00000295767 HMGCRP04035 888 aa31.49■■■□□ 2.63
CHCHD4-201ENST00000295767 GRK4P32298 578 aa31.49■■■□□ 2.63
CHCHD4-201ENST00000295767 ACVR2BQ13705 512 aa31.49■■■□□ 2.63
CHCHD4-201ENST00000295767 NIPA1Q7RTP0 329 aa31.49■■■□□ 2.63
CHCHD4-201ENST00000295767 PLA2G4DQ86XP0 818 aa31.49■■■□□ 2.63
CHCHD4-201ENST00000295767 GPRASP2Q96D09 838 aa31.49■■■□□ 2.63
CHCHD4-201ENST00000295767 ZHX1Q9UKY1 873 aaPredicted RBP31.49■■■□□ 2.63
CHCHD4-201ENST00000295767 MTMR1Q13613 665 aa31.48■■■□□ 2.63
CHCHD4-201ENST00000295767 GNPTABQ3T906 1256 aa31.48■■■□□ 2.63
CHCHD4-201ENST00000295767 Q4G0T1 1027 aa31.48■■■□□ 2.63
CHCHD4-201ENST00000295767 NLRX1Q86UT6 975 aa31.48■■■□□ 2.63
CHCHD4-201ENST00000295767 FTOQ9C0B1 505 aaKnown RBP eCLIP31.48■■■□□ 2.63
CHCHD4-201ENST00000295767 PRDM10Q9NQV6 1147 aa31.48■■■□□ 2.63
CHCHD4-201ENST00000295767 PDGFCQ9NRA1 345 aa31.48■■■□□ 2.63
CHCHD4-201ENST00000295767 EIF4ENIF1Q9NRA8 985 aaKnown RBP31.48■■■□□ 2.63
CHCHD4-201ENST00000295767 SEMA3FQ13275 785 aa31.47■■■□□ 2.63
CHCHD4-201ENST00000295767 TAPT1Q6NXT6 567 aa31.47■■■□□ 2.63
CHCHD4-201ENST00000295767 ARP10275 920 aa31.46■■■□□ 2.63
CHCHD4-201ENST00000295767 SETQ01105 290 aaPredicted RBP31.46■■■□□ 2.63
CHCHD4-201ENST00000295767 CACNB2Q08289 660 aaPredicted RBP31.46■■■□□ 2.63
CHCHD4-201ENST00000295767 POTEDQ86YR6 584 aa31.46■■■□□ 2.63
CHCHD4-201ENST00000295767 CHAMP1Q96JM3 812 aa31.46■■■□□ 2.63
CHCHD4-201ENST00000295767 USP28Q96RU2 1077 aa31.46■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms