RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 DIXDC1Q155Q3 683 aa16.25■□□□□ 0.19
CCNF-201ENST00000293968 TMEM266Q2M3C6 531 aa16.25■□□□□ 0.19
CCNF-201ENST00000293968 SFMBT2Q5VUG0 894 aa16.25■□□□□ 0.19
CCNF-201ENST00000293968 MCTP2Q6DN12 878 aa16.25■□□□□ 0.19
CCNF-201ENST00000293968 IL17RBQ9NRM6 502 aa16.25■□□□□ 0.19
CCNF-201ENST00000293968 LOC102724159A0A0B4J2E5 919 aa16.24■□□□□ 0.19
CCNF-201ENST00000293968 ADAMTS2O95450 1211 aa16.24■□□□□ 0.19
CCNF-201ENST00000293968 TNNI2P48788 182 aa16.24■□□□□ 0.19
CCNF-201ENST00000293968 IFT88Q13099 833 aa16.24■□□□□ 0.19
CCNF-201ENST00000293968 PWP2Q15269 919 aaKnown RBP16.24■□□□□ 0.19
CCNF-201ENST00000293968 TRADDQ15628 312 aa16.24■□□□□ 0.19
CCNF-201ENST00000293968 KIAA0753Q2KHM9 967 aa16.24■□□□□ 0.19
CCNF-201ENST00000293968 KRT25Q7Z3Z0 450 aa16.24■□□□□ 0.19
CCNF-201ENST00000293968 HNRNPH1P31943 449 aaKnown RBP16.24■□□□□ 0.19
CCNF-201ENST00000293968 CALCRLQ16602 461 aa16.24■□□□□ 0.19
CCNF-201ENST00000293968 TLR10Q9BXR5 811 aa16.24■□□□□ 0.19
CCNF-201ENST00000293968 GOLPH3Q9H4A6 298 aa16.24■□□□□ 0.19
CCNF-201ENST00000293968 MYMKA6NI61 221 aa16.24■□□□□ 0.19
CCNF-201ENST00000293968 STXBP3O00186 592 aa16.24■□□□□ 0.19
CCNF-201ENST00000293968 KCNK3O14649 394 aa16.24■□□□□ 0.19
CCNF-201ENST00000293968 BACH1O14867 736 aa16.24■□□□□ 0.19
CCNF-201ENST00000293968 CYTH3O43739 400 aa16.24■□□□□ 0.19
CCNF-201ENST00000293968 SHOX2O60902 331 aaPredicted RBP16.24■□□□□ 0.19
CCNF-201ENST00000293968 NTSR2O95665 410 aa16.24■□□□□ 0.19
CCNF-201ENST00000293968 NR1D1P20393 614 aa16.24■□□□□ 0.19
CCNF-201ENST00000293968 GLIS3Q8NEA6 775 aa16.24■□□□□ 0.19
CCNF-201ENST00000293968 BARHL2Q9NY43 387 aa16.24■□□□□ 0.19
CCNF-201ENST00000293968 ADAMTS1Q9UHI8 967 aa16.24■□□□□ 0.19
CCNF-201ENST00000293968 ZNF652Q9Y2D9 606 aa16.24■□□□□ 0.19
CCNF-201ENST00000293968 MYH2Q9UKX2 1941 aa16.24■□□□□ 0.19
CCNF-201ENST00000293968 DNAAF5Q86Y56 855 aa16.23■□□□□ 0.19
CCNF-201ENST00000293968 GJA10Q969M2 543 aa16.23■□□□□ 0.19
CCNF-201ENST00000293968 SH3GLB2Q9NR46 395 aa16.23■□□□□ 0.19
CCNF-201ENST00000293968 MAD2L2Q9UI95 211 aa16.23■□□□□ 0.19
CCNF-201ENST00000293968 GNA11P29992 359 aa16.23■□□□□ 0.19
CCNF-201ENST00000293968 RDXP35241 583 aaKnown RBP16.23■□□□□ 0.19
CCNF-201ENST00000293968 EIF6P56537 245 aaKnown RBP16.23■□□□□ 0.19
CCNF-201ENST00000293968 MICALCLQ6ZW33 695 aa16.23■□□□□ 0.19
CCNF-201ENST00000293968 LARP4BQ92615 738 aaKnown RBP16.23■□□□□ 0.19
CCNF-201ENST00000293968 PURBQ96QR8 312 aaKnown RBP16.23■□□□□ 0.19
CCNF-201ENST00000293968 CUEDC2Q9H467 287 aa16.23■□□□□ 0.19
CCNF-201ENST00000293968 CEP104O60308 925 aa16.23■□□□□ 0.19
CCNF-201ENST00000293968 OR2W6PQ8NHA6 318 aa16.23■□□□□ 0.19
CCNF-201ENST00000293968 PIGSQ96S52 555 aa16.23■□□□□ 0.19
CCNF-201ENST00000293968 TMEM47Q9BQJ4 181 aa16.23■□□□□ 0.19
CCNF-201ENST00000293968 SLAIN2Q9P270 581 aa16.23■□□□□ 0.19
CCNF-201ENST00000293968 A0A1W2PQJ5 194 aa16.23■□□□□ 0.19
CCNF-201ENST00000293968 CAMTA2O94983 1202 aa16.23■□□□□ 0.19
CCNF-201ENST00000293968 KLHL30Q0D2K2 578 aa16.23■□□□□ 0.19
CCNF-201ENST00000293968 GRM4Q14833 912 aa16.23■□□□□ 0.19
CCNF-201ENST00000293968 KRT79Q5XKE5 535 aa16.23■□□□□ 0.19
CCNF-201ENST00000293968 REXO1Q8N1G1 1221 aaKnown RBP16.23■□□□□ 0.19
CCNF-201ENST00000293968 FAM133AQ8N9E0 248 aa16.23■□□□□ 0.19
CCNF-201ENST00000293968 AK8Q96MA6 479 aa16.23■□□□□ 0.19
CCNF-201ENST00000293968 C7orf25Q9BPX7 421 aa16.23■□□□□ 0.19
CCNF-201ENST00000293968 ANKIB1Q9P2G1 1089 aa16.23■□□□□ 0.19
CCNF-201ENST00000293968 FRMPD2Q68DX3 1309 aaPredicted RBP16.22■□□□□ 0.19
CCNF-201ENST00000293968 LAD1O00515 517 aa16.22■□□□□ 0.19
CCNF-201ENST00000293968 UBLCP1Q8WVY7 318 aaPredicted RBP16.22■□□□□ 0.19
CCNF-201ENST00000293968 GRIN2DO15399 1336 aa16.22■□□□□ 0.19
CCNF-201ENST00000293968 LSP1P33241 339 aa16.22■□□□□ 0.19
CCNF-201ENST00000293968 KLHDC7AQ5VTJ3 777 aa16.22■□□□□ 0.19
CCNF-201ENST00000293968 SH3RF3Q8TEJ3 882 aaPredicted RBP16.22■□□□□ 0.19
CCNF-201ENST00000293968 PLAAQ9Y263 795 aa16.22■□□□□ 0.19
CCNF-201ENST00000293968 PPP1R2P41236 205 aa16.22■□□□□ 0.19
CCNF-201ENST00000293968 CDR1P51861 262 aa16.22■□□□□ 0.19
CCNF-201ENST00000293968 PDXDC1Q6P996 788 aa16.22■□□□□ 0.19
CCNF-201ENST00000293968 DGKHQ86XP1 1220 aa16.22■□□□□ 0.19
CCNF-201ENST00000293968 JPH2Q9BR39 696 aaPredicted RBP16.22■□□□□ 0.19
CCNF-201ENST00000293968 AP1M1Q9BXS5 423 aa16.22■□□□□ 0.19
CCNF-201ENST00000293968 INTS5Q6P9B9 1019 aaKnown RBP16.21■□□□□ 0.19
CCNF-201ENST00000293968 TMED8Q6PL24 325 aaPredicted RBP16.21■□□□□ 0.19
CCNF-201ENST00000293968 ZNF662Q6ZS27 426 aa16.21■□□□□ 0.19
CCNF-201ENST00000293968 TRIM31Q9BZY9 425 aa16.21■□□□□ 0.19
CCNF-201ENST00000293968 BMP2KQ9NSY1 1161 aaPredicted RBP16.21■□□□□ 0.19
CCNF-201ENST00000293968 SIK3Q9Y2K2 1263 aa16.21■□□□□ 0.19
CCNF-201ENST00000293968 GOLGA6L7A0A1B0GV03 622 aa16.21■□□□□ 0.19
CCNF-201ENST00000293968 TNNC1P63316 161 aa16.21■□□□□ 0.19
CCNF-201ENST00000293968 DDX12PQ92771 950 aa16.21■□□□□ 0.19
CCNF-201ENST00000293968 COA7Q96BR5 231 aa16.21■□□□□ 0.19
CCNF-201ENST00000293968 SPAG5Q96R06 1193 aa16.21■□□□□ 0.19
CCNF-201ENST00000293968 MAGEF1Q9HAY2 307 aa16.21■□□□□ 0.19
CCNF-201ENST00000293968 LOC102724428A0A0B4J2F2 783 aa16.21■□□□□ 0.19
CCNF-201ENST00000293968 LDHBP07195 334 aaKnown RBP16.21■□□□□ 0.19
CCNF-201ENST00000293968 KLRC1P26715 233 aa16.21■□□□□ 0.19
CCNF-201ENST00000293968 SIK1P57059 783 aa16.21■□□□□ 0.19
CCNF-201ENST00000293968 CCDC91Q7Z6B0 441 aa16.21■□□□□ 0.19
CCNF-201ENST00000293968 PACSIN1Q9BY11 444 aa16.21■□□□□ 0.19
CCNF-201ENST00000293968 BSDC1Q9NW68 430 aaPredicted RBP16.21■□□□□ 0.19
CCNF-201ENST00000293968 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.21■□□□□ 0.19
CCNF-201ENST00000293968 MYH6P13533 1939 aa16.21■□□□□ 0.18
CCNF-201ENST00000293968 ALS2Q96Q42 1657 aa16.2■□□□□ 0.18
CCNF-201ENST00000293968 CDK17Q00537 523 aa16.2■□□□□ 0.18
CCNF-201ENST00000293968 FAM83BQ5T0W9 1011 aa16.2■□□□□ 0.18
CCNF-201ENST00000293968 DDX42Q86XP3 938 aaKnown RBP eCLIP16.2■□□□□ 0.18
CCNF-201ENST00000293968 CASKIN2Q8WXE0 1202 aa16.2■□□□□ 0.18
CCNF-201ENST00000293968 RAB34Q9BZG1 259 aa16.2■□□□□ 0.18
CCNF-201ENST00000293968 ZNF233A6NK53 670 aa16.2■□□□□ 0.18
CCNF-201ENST00000293968 TDP2O95551 362 aa16.2■□□□□ 0.18
CCNF-201ENST00000293968 RPS8P62241 208 aaKnown RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms