RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 MAFAQ8NHW3 353 aaPredicted RBP29.32■■■□□ 2.28
U2AF1-201ENST00000291552 RGS20O76081 388 aa29.31■■■□□ 2.28
U2AF1-201ENST00000291552 SUPT20HL2P0C7V6 817 aa29.31■■■□□ 2.28
U2AF1-201ENST00000291552 HOXA13P31271 388 aaPredicted RBP29.31■■■□□ 2.28
U2AF1-201ENST00000291552 TMEM67Q5HYA8 995 aa29.31■■■□□ 2.28
U2AF1-201ENST00000291552 OTOP2Q7RTS6 562 aa29.31■■■□□ 2.28
U2AF1-201ENST00000291552 IL31RAQ8NI17 732 aa29.31■■■□□ 2.28
U2AF1-201ENST00000291552 IGDCC4Q8TDY8 1250 aa29.31■■■□□ 2.28
U2AF1-201ENST00000291552 KAT2BQ92831 832 aa29.31■■■□□ 2.28
U2AF1-201ENST00000291552 PDCD2LQ9BRP1 358 aa29.31■■■□□ 2.28
U2AF1-201ENST00000291552 ZNF576Q9H609 170 aa29.31■■■□□ 2.28
U2AF1-201ENST00000291552 DDX41Q9UJV9 622 aaKnown RBP29.31■■■□□ 2.28
U2AF1-201ENST00000291552 DOCK5Q9H7D0 1870 aa29.3■■■□□ 2.28
U2AF1-201ENST00000291552 EIF3JO75822 258 aaKnown RBP29.3■■■□□ 2.28
U2AF1-201ENST00000291552 FOSL2P15408 326 aa29.3■■■□□ 2.28
U2AF1-201ENST00000291552 PHF6Q8IWS0 365 aaKnown RBP eCLIP29.3■■■□□ 2.28
U2AF1-201ENST00000291552 CTAGE1Q96RT6 745 aa29.3■■■□□ 2.28
U2AF1-201ENST00000291552 LSG1Q9H089 658 aaKnown RBP29.3■■■□□ 2.28
U2AF1-201ENST00000291552 ERICH2A1L162 156 aa29.29■■■□□ 2.28
U2AF1-201ENST00000291552 LY9Q9HBG7 655 aa29.29■■■□□ 2.28
U2AF1-201ENST00000291552 PTPRSQ13332 1948 aa29.29■■■□□ 2.28
U2AF1-201ENST00000291552 PTPN11Q06124 597 aaPredicted RBP29.28■■■□□ 2.28
U2AF1-201ENST00000291552 SART3Q15020 963 aaKnown RBP29.28■■■□□ 2.28
U2AF1-201ENST00000291552 SKAP1Q86WV1 359 aa29.28■■■□□ 2.28
U2AF1-201ENST00000291552 MAP3K20Q9NYL2 800 aaKnown RBP29.28■■■□□ 2.28
U2AF1-201ENST00000291552 PGM5Q15124 567 aa29.27■■■□□ 2.28
U2AF1-201ENST00000291552 EMID1Q96A84 441 aaPredicted RBP29.27■■■□□ 2.28
U2AF1-201ENST00000291552 YBX2Q9Y2T7 364 aaKnown RBP29.27■■■□□ 2.28
U2AF1-201ENST00000291552 MRVI1Q9Y6F6 885 aa29.27■■■□□ 2.28
U2AF1-201ENST00000291552 VCANP13611 3396 aa29.27■■■□□ 2.28
U2AF1-201ENST00000291552 PNMA6FA0A0J9YX94 578 aa29.26■■■□□ 2.27
U2AF1-201ENST00000291552 MYCLP12524 364 aaPredicted RBP29.26■■■□□ 2.27
U2AF1-201ENST00000291552 CATIPQ7Z7H3 387 aa29.26■■■□□ 2.27
U2AF1-201ENST00000291552 MYL10Q9BUA6 226 aa29.26■■■□□ 2.27
U2AF1-201ENST00000291552 MTIF3Q9H2K0 278 aaKnown RBP29.26■■■□□ 2.27
U2AF1-201ENST00000291552 CHMP4BP1P59074 171 aa29.25■■■□□ 2.27
U2AF1-201ENST00000291552 VSIG10LQ86VR7 867 aa29.25■■■□□ 2.27
U2AF1-201ENST00000291552 SESTD1Q86VW0 696 aa29.25■■■□□ 2.27
U2AF1-201ENST00000291552 RPUSD2Q8IZ73 545 aaKnown RBP29.25■■■□□ 2.27
U2AF1-201ENST00000291552 SAMD3Q8N6K7 520 aa29.25■■■□□ 2.27
U2AF1-201ENST00000291552 ZFP91Q96JP5 570 aaPredicted RBP29.25■■■□□ 2.27
U2AF1-201ENST00000291552 ESYT1Q9BSJ8 1104 aa29.25■■■□□ 2.27
U2AF1-201ENST00000291552 PITPNM1O00562 1244 aa29.24■■■□□ 2.27
U2AF1-201ENST00000291552 GDF6Q6KF10 455 aaPredicted RBP29.24■■■□□ 2.27
U2AF1-201ENST00000291552 DEFB128Q7Z7B8 93 aa29.24■■■□□ 2.27
U2AF1-201ENST00000291552 ZNF654Q8IZM8 581 aa29.24■■■□□ 2.27
U2AF1-201ENST00000291552 PIBF1Q8WXW3 757 aa29.24■■■□□ 2.27
U2AF1-201ENST00000291552 GPKOWQ92917 476 aaPredicted RBP eCLIP29.24■■■□□ 2.27
U2AF1-201ENST00000291552 NKX2-4Q9H2Z4 354 aa29.24■■■□□ 2.27
U2AF1-201ENST00000291552 FRMPD4Q14CM0 1322 aa29.23■■■□□ 2.27
U2AF1-201ENST00000291552 GCOM1H8Y6P7 765 aaPredicted RBP29.23■■■□□ 2.27
U2AF1-201ENST00000291552 PRC1O43663 620 aa29.23■■■□□ 2.27
U2AF1-201ENST00000291552 POLR2MP0CAP2 368 aa29.23■■■□□ 2.27
U2AF1-201ENST00000291552 HOXD8P13378 290 aaPredicted RBP29.23■■■□□ 2.27
U2AF1-201ENST00000291552 RAB30Q15771 203 aa29.23■■■□□ 2.27
U2AF1-201ENST00000291552 FCHSD1Q86WN1 690 aa29.23■■■□□ 2.27
U2AF1-201ENST00000291552 USP38Q8NB14 1042 aa29.23■■■□□ 2.27
U2AF1-201ENST00000291552 PPTC7Q8NI37 304 aa29.23■■■□□ 2.27
U2AF1-201ENST00000291552 DHX38Q92620 1227 aaKnown RBP29.23■■■□□ 2.27
U2AF1-201ENST00000291552 SH2B2O14492 632 aaPredicted RBP29.22■■■□□ 2.27
U2AF1-201ENST00000291552 SLC27A2O14975 620 aa29.22■■■□□ 2.27
U2AF1-201ENST00000291552 PFKMP08237 780 aa29.22■■■□□ 2.27
U2AF1-201ENST00000291552 IQCF3P0C7M6 154 aa29.22■■■□□ 2.27
U2AF1-201ENST00000291552 ZNF286BP0CG31 522 aa29.22■■■□□ 2.27
U2AF1-201ENST00000291552 CASTP20810 708 aaKnown RBP29.22■■■□□ 2.27
U2AF1-201ENST00000291552 RABGGTBP53611 331 aa29.22■■■□□ 2.27
U2AF1-201ENST00000291552 SP2Q02086 613 aa29.22■■■□□ 2.27
U2AF1-201ENST00000291552 LAMC2Q13753 1193 aa29.22■■■□□ 2.27
U2AF1-201ENST00000291552 PTGISQ16647 500 aa29.22■■■□□ 2.27
U2AF1-201ENST00000291552 DGKDQ16760 1214 aa29.22■■■□□ 2.27
U2AF1-201ENST00000291552 MAP3K14Q99558 947 aa29.22■■■□□ 2.27
U2AF1-201ENST00000291552 SPZ1Q9BXG8 430 aa29.22■■■□□ 2.27
U2AF1-201ENST00000291552 SLC4A7Q9Y6M7 1214 aa29.22■■■□□ 2.27
U2AF1-201ENST00000291552 SPTBN5Q9NRC6 3674 aaKnown RBP29.22■■■□□ 2.27
U2AF1-201ENST00000291552 ZBBXA8MT70 800 aa29.21■■■□□ 2.27
U2AF1-201ENST00000291552 SORBS3O60504 671 aa29.21■■■□□ 2.27
U2AF1-201ENST00000291552 DDAH1O94760 285 aa29.21■■■□□ 2.27
U2AF1-201ENST00000291552 F2P00734 622 aa29.21■■■□□ 2.27
U2AF1-201ENST00000291552 UBA1P22314 1058 aaKnown RBP29.21■■■□□ 2.27
U2AF1-201ENST00000291552 PSEN2P49810 448 aa29.21■■■□□ 2.27
U2AF1-201ENST00000291552 TRAF1Q13077 416 aa29.21■■■□□ 2.27
U2AF1-201ENST00000291552 MYSM1Q5VVJ2 828 aa29.21■■■□□ 2.27
U2AF1-201ENST00000291552 DHX37Q8IY37 1157 aaKnown RBP29.21■■■□□ 2.27
U2AF1-201ENST00000291552 PRDM12Q9H4Q4 367 aa29.21■■■□□ 2.27
U2AF1-201ENST00000291552 MSRAQ9UJ68 235 aa29.21■■■□□ 2.27
U2AF1-201ENST00000291552 TRANK1O15050 2925 aa29.21■■■□□ 2.27
U2AF1-201ENST00000291552 RBAK-RBAKDNI3L0D1 243 aa29.2■■■□□ 2.26
U2AF1-201ENST00000291552 HAS3O00219 553 aa29.2■■■□□ 2.26
U2AF1-201ENST00000291552 PLEKHA8P1O95397 391 aa29.2■■■□□ 2.26
U2AF1-201ENST00000291552 RFC2P35250 354 aa29.2■■■□□ 2.26
U2AF1-201ENST00000291552 CELF3Q5SZQ8 465 aaKnown RBP29.2■■■□□ 2.26
U2AF1-201ENST00000291552 CREB3L3Q68CJ9 461 aa29.2■■■□□ 2.26
U2AF1-201ENST00000291552 MTA3Q9BTC8 594 aa29.2■■■□□ 2.26
U2AF1-201ENST00000291552 COL25A1Q9BXS0 654 aaPredicted RBP29.2■■■□□ 2.26
U2AF1-201ENST00000291552 HDAC6Q9UBN7 1215 aa29.2■■■□□ 2.26
U2AF1-201ENST00000291552 GTF2IRD1Q9UHL9 959 aa29.2■■■□□ 2.26
U2AF1-201ENST00000291552 NOD1Q9Y239 953 aa29.2■■■□□ 2.26
U2AF1-201ENST00000291552 GGPS1O95749 300 aa29.19■■■□□ 2.26
U2AF1-201ENST00000291552 MYOGP15173 224 aa29.19■■■□□ 2.26
U2AF1-201ENST00000291552 CCND2P30279 289 aa29.19■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms