RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 SMPD1P17405 629 aa30.82■■■□□ 2.52
SSU72-201ENST00000291386 MNX1P50219 401 aaPredicted RBP30.82■■■□□ 2.52
SSU72-201ENST00000291386 DUSP28Q4G0W2 176 aa30.82■■■□□ 2.52
SSU72-201ENST00000291386 ARRDC4Q8NCT1 418 aa30.82■■■□□ 2.52
SSU72-201ENST00000291386 AIFM3Q96NN9 605 aa30.82■■■□□ 2.52
SSU72-201ENST00000291386 WDR11Q9BZH6 1224 aa30.82■■■□□ 2.52
SSU72-201ENST00000291386 EHMT1Q9H9B1 1298 aa30.82■■■□□ 2.52
SSU72-201ENST00000291386 ADAMTS4O75173 837 aa30.81■■■□□ 2.52
SSU72-201ENST00000291386 NLRP5P59047 1200 aa30.81■■■□□ 2.52
SSU72-201ENST00000291386 GALNT17Q6IS24 598 aa30.81■■■□□ 2.52
SSU72-201ENST00000291386 UPF3AQ9H1J1 476 aaKnown RBP30.81■■■□□ 2.52
SSU72-201ENST00000291386 NKRFO15226 690 aaKnown RBP eCLIP30.8■■■□□ 2.523e-6■■■■□ 24.3
SSU72-201ENST00000291386 JAK2O60674 1132 aa30.8■■■□□ 2.52
SSU72-201ENST00000291386 RGS20O76081 388 aa30.8■■■□□ 2.52
SSU72-201ENST00000291386 XBP1P17861 261 aa30.8■■■□□ 2.52
SSU72-201ENST00000291386 GJA9P57773 515 aa30.8■■■□□ 2.52
SSU72-201ENST00000291386 MRPS9P82933 396 aaKnown RBP30.8■■■□□ 2.52
SSU72-201ENST00000291386 TTLL4Q14679 1199 aa30.8■■■□□ 2.52
SSU72-201ENST00000291386 REXO1Q8N1G1 1221 aaKnown RBP30.8■■■□□ 2.52
SSU72-201ENST00000291386 DAGLBQ8NCG7 672 aa30.8■■■□□ 2.52
SSU72-201ENST00000291386 LENG1Q96BZ8 264 aaPredicted RBP30.8■■■□□ 2.52
SSU72-201ENST00000291386 TMX3Q96JJ7 454 aa30.8■■■□□ 2.52
SSU72-201ENST00000291386 ANO3Q9BYT9 981 aa30.8■■■□□ 2.52
SSU72-201ENST00000291386 CCDC62Q6P9F0 684 aa30.79■■■□□ 2.52
SSU72-201ENST00000291386 INPP4AQ96PE3 977 aaPredicted RBP30.79■■■□□ 2.52
SSU72-201ENST00000291386 ALG1Q9BT22 464 aa30.79■■■□□ 2.52
SSU72-201ENST00000291386 PHF20Q9BVI0 1012 aa30.79■■■□□ 2.52
SSU72-201ENST00000291386 TMEM260Q9NX78 707 aa30.79■■■□□ 2.52
SSU72-201ENST00000291386 PCDHA4Q9UN74 947 aa30.79■■■□□ 2.52
SSU72-201ENST00000291386 SYNRGQ9UMZ2 1314 aa30.78■■■□□ 2.52
SSU72-201ENST00000291386 DNM1LO00429 736 aa30.78■■■□□ 2.52
SSU72-201ENST00000291386 ADAMTS3O15072 1205 aa30.78■■■□□ 2.52
SSU72-201ENST00000291386 FARP2O94887 1054 aaPredicted RBP30.78■■■□□ 2.52
SSU72-201ENST00000291386 LRRC41Q15345 812 aa30.78■■■□□ 2.52
SSU72-201ENST00000291386 NPY5RQ15761 445 aa30.78■■■□□ 2.52
SSU72-201ENST00000291386 KCNV1Q6PIU1 500 aa30.78■■■□□ 2.52
SSU72-201ENST00000291386 SEPT14Q6ZU15 432 aa30.78■■■□□ 2.52
SSU72-201ENST00000291386 KLHDC9Q8NEP7 349 aa30.78■■■□□ 2.52
SSU72-201ENST00000291386 DTNBO60941 627 aa30.77■■■□□ 2.52
SSU72-201ENST00000291386 CST5P28325 142 aaPredicted RBP30.77■■■□□ 2.52
SSU72-201ENST00000291386 SREBF1P36956 1147 aa30.77■■■□□ 2.52
SSU72-201ENST00000291386 HMGN5P82970 282 aaKnown RBP30.77■■■□□ 2.52
SSU72-201ENST00000291386 TMEM63BQ5T3F8 832 aa30.77■■■□□ 2.52
SSU72-201ENST00000291386 JAKMIP3Q5VZ66 844 aa30.77■■■□□ 2.52
SSU72-201ENST00000291386 RNF180Q86T96 592 aa30.77■■■□□ 2.52
SSU72-201ENST00000291386 SPC25Q9HBM1 224 aa30.77■■■□□ 2.52
SSU72-201ENST00000291386 M0R2N6 131 aa30.76■■■□□ 2.51
SSU72-201ENST00000291386 ARIH2O95376 493 aa30.76■■■□□ 2.51
SSU72-201ENST00000291386 PGK1P00558 417 aa30.76■■■□□ 2.51
SSU72-201ENST00000291386 TXNP10599 105 aaKnown RBP30.76■■■□□ 2.51
SSU72-201ENST00000291386 TGFB3P10600 412 aa30.76■■■□□ 2.51
SSU72-201ENST00000291386 ICAM3P32942 547 aa30.76■■■□□ 2.51
SSU72-201ENST00000291386 TLK2Q86UE8 772 aa30.76■■■□□ 2.51
SSU72-201ENST00000291386 CRYGNQ8WXF5 182 aa30.76■■■□□ 2.51
SSU72-201ENST00000291386 DDX41Q9UJV9 622 aaKnown RBP30.76■■■□□ 2.51
SSU72-201ENST00000291386 CTAGE5O15320 804 aa30.75■■■□□ 2.51
SSU72-201ENST00000291386 GNPTABQ3T906 1256 aa30.75■■■□□ 2.51
SSU72-201ENST00000291386 BLIDQ8IZY5 108 aa30.75■■■□□ 2.51
SSU72-201ENST00000291386 PGBD1Q96JS3 809 aa30.75■■■□□ 2.51
SSU72-201ENST00000291386 TSEN34Q9BSV6 310 aaKnown RBP30.75■■■□□ 2.51
SSU72-201ENST00000291386 COL6A1P12109 1028 aa30.74■■■□□ 2.51
SSU72-201ENST00000291386 GJC2Q5T442 439 aaPredicted RBP30.74■■■□□ 2.51
SSU72-201ENST00000291386 CCSAPQ6IQ19 270 aaPredicted RBP30.74■■■□□ 2.51
SSU72-201ENST00000291386 NECAB2Q7Z6G3 386 aa30.74■■■□□ 2.51
SSU72-201ENST00000291386 DIS3LQ8TF46 1054 aaKnown RBP30.74■■■□□ 2.51
SSU72-201ENST00000291386 PAWRQ96IZ0 340 aaKnown RBP30.74■■■□□ 2.51
SSU72-201ENST00000291386 AP5M1Q9H0R1 490 aa30.74■■■□□ 2.51
SSU72-201ENST00000291386 KCNJ14Q9UNX9 436 aa30.74■■■□□ 2.51
SSU72-201ENST00000291386 UBIAD1Q9Y5Z9 338 aa30.74■■■□□ 2.51
SSU72-201ENST00000291386 MRVI1Q9Y6F6 885 aa30.74■■■□□ 2.51
SSU72-201ENST00000291386 DYNC1LI2O43237 492 aaPredicted RBP30.73■■■□□ 2.51
SSU72-201ENST00000291386 CYP3A4P08684 503 aa30.73■■■□□ 2.51
SSU72-201ENST00000291386 NLRX1Q86UT6 975 aa30.73■■■□□ 2.51
SSU72-201ENST00000291386 ZFP91Q96JP5 570 aaPredicted RBP30.73■■■□□ 2.51
SSU72-201ENST00000291386 RTEL1Q9NZ71 1219 aa30.73■■■□□ 2.51
SSU72-201ENST00000291386 MYH7BA7E2Y1 1941 aa30.73■■■□□ 2.51
SSU72-201ENST00000291386 SPATA31C2B4DYI2 1134 aa30.72■■■□□ 2.51
SSU72-201ENST00000291386 KBTBD13C9JR72 458 aa30.72■■■□□ 2.51
SSU72-201ENST00000291386 C6orf222P0C671 652 aaPredicted RBP30.72■■■□□ 2.51
SSU72-201ENST00000291386 RASGRP4Q8TDF6 673 aa30.72■■■□□ 2.51
SSU72-201ENST00000291386 GPRASP2Q96D09 838 aa30.72■■■□□ 2.51
SSU72-201ENST00000291386 C11orf49Q9H6J7 331 aa30.72■■■□□ 2.51
SSU72-201ENST00000291386 GJB4Q9NTQ9 266 aa30.72■■■□□ 2.51
SSU72-201ENST00000291386 FIBPO43427 364 aa30.71■■■□□ 2.51
SSU72-201ENST00000291386 ITGB5P18084 799 aa30.71■■■□□ 2.51
SSU72-201ENST00000291386 ARHGAP4P98171 946 aa30.71■■■□□ 2.51
SSU72-201ENST00000291386 LY6KQ17RY6 165 aa30.71■■■□□ 2.51
SSU72-201ENST00000291386 PCSK9Q8NBP7 692 aaKnown RBP30.71■■■□□ 2.51
SSU72-201ENST00000291386 EMID1Q96A84 441 aaPredicted RBP30.71■■■□□ 2.51
SSU72-201ENST00000291386 PHF24Q9UPV7 400 aa30.71■■■□□ 2.51
SSU72-201ENST00000291386 MYADML2A6NDP7 307 aa30.7■■■□□ 2.51
SSU72-201ENST00000291386 MOXD2PA6NHM9 499 aa30.7■■■□□ 2.51
SSU72-201ENST00000291386 MAFGO15525 162 aa30.7■■■□□ 2.51
SSU72-201ENST00000291386 GH1P01241 217 aa30.7■■■□□ 2.51
SSU72-201ENST00000291386 PTGS1P23219 599 aa30.7■■■□□ 2.51
SSU72-201ENST00000291386 SEMA3FQ13275 785 aa30.7■■■□□ 2.51
SSU72-201ENST00000291386 OR6J1Q8NGC5 347 aa30.7■■■□□ 2.51
SSU72-201ENST00000291386 COPS5Q92905 334 aa30.7■■■□□ 2.51
SSU72-201ENST00000291386 CDHR1Q96JP9 859 aa30.7■■■□□ 2.51
SSU72-201ENST00000291386 JADE2Q9NQC1 790 aa30.7■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms