RNA–Protein interactions for RNA: ENST00000287814.4

TIMP4-201, Transcript of TIMP metallopeptidase inhibitor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4-201ENST00000287814 SYNRGQ9UMZ2 1314 aa22.79■■□□□ 1.24
TIMP4-201ENST00000287814 MYADML2A6NDP7 307 aa22.78■■□□□ 1.24
TIMP4-201ENST00000287814 MYCNP04198 464 aaPredicted RBP22.78■■□□□ 1.24
TIMP4-201ENST00000287814 CAPN2P17655 700 aa22.78■■□□□ 1.24
TIMP4-201ENST00000287814 CCND2P30279 289 aa22.78■■□□□ 1.24
TIMP4-201ENST00000287814 ANKLE1Q8NAG6 615 aa22.78■■□□□ 1.24
TIMP4-201ENST00000287814 CCDC12Q8WUD4 166 aaPredicted RBP22.78■■□□□ 1.24
TIMP4-201ENST00000287814 C6orf50Q9HD87 102 aa22.78■■□□□ 1.24
TIMP4-201ENST00000287814 SH2B1Q9NRF2 756 aaPredicted RBP22.78■■□□□ 1.24
TIMP4-201ENST00000287814 SPDYE3A6NKU9 549 aa22.77■■□□□ 1.24
TIMP4-201ENST00000287814 CTAGE5O15320 804 aa22.77■■□□□ 1.24
TIMP4-201ENST00000287814 DUSP28Q4G0W2 176 aa22.77■■□□□ 1.24
TIMP4-201ENST00000287814 JAKMIP3Q5VZ66 844 aa22.77■■□□□ 1.24
TIMP4-201ENST00000287814 CCDC62Q6P9F0 684 aa22.77■■□□□ 1.24
TIMP4-201ENST00000287814 SCFD2Q8WU76 684 aa22.77■■□□□ 1.24
TIMP4-201ENST00000287814 COPS5Q92905 334 aa22.77■■□□□ 1.24
TIMP4-201ENST00000287814 GLT8D2Q9H1C3 349 aa22.77■■□□□ 1.24
TIMP4-201ENST00000287814 RTEL1Q9NZ71 1219 aa22.77■■□□□ 1.24
TIMP4-201ENST00000287814 NLRP5P59047 1200 aa22.77■■□□□ 1.24
TIMP4-201ENST00000287814 NPY5RQ15761 445 aa22.77■■□□□ 1.24
TIMP4-201ENST00000287814 PCNX4Q63HM2 1172 aa22.77■■□□□ 1.24
TIMP4-201ENST00000287814 TEX2Q8IWB9 1127 aa22.77■■□□□ 1.24
TIMP4-201ENST00000287814 ARRDC4Q8NCT1 418 aa22.77■■□□□ 1.24
TIMP4-201ENST00000287814 CCDC148Q8NFR7 591 aa22.77■■□□□ 1.24
TIMP4-201ENST00000287814 RASGRP4Q8TDF6 673 aa22.77■■□□□ 1.24
TIMP4-201ENST00000287814 KCNJ14Q9UNX9 436 aa22.77■■□□□ 1.24
TIMP4-201ENST00000287814 DYNC1LI2O43237 492 aaPredicted RBP22.76■■□□□ 1.23
TIMP4-201ENST00000287814 TXNP10599 105 aaKnown RBP22.76■■□□□ 1.23
TIMP4-201ENST00000287814 GNA11P29992 359 aa22.76■■□□□ 1.23
TIMP4-201ENST00000287814 GJA9P57773 515 aa22.76■■□□□ 1.23
TIMP4-201ENST00000287814 LY6KQ17RY6 165 aa22.76■■□□□ 1.23
TIMP4-201ENST00000287814 KLHDC9Q8NEP7 349 aa22.76■■□□□ 1.23
TIMP4-201ENST00000287814 IL27Q8NEV9 243 aa22.76■■□□□ 1.23
TIMP4-201ENST00000287814 TMX3Q96JJ7 454 aa22.76■■□□□ 1.23
TIMP4-201ENST00000287814 ANO3Q9BYT9 981 aa22.76■■□□□ 1.23
TIMP4-201ENST00000287814 UPF3AQ9H1J1 476 aaKnown RBP22.76■■□□□ 1.23
TIMP4-201ENST00000287814 DNM1LO00429 736 aa22.75■■□□□ 1.23
TIMP4-201ENST00000287814 FOSP01100 380 aaPredicted RBP22.75■■□□□ 1.23
TIMP4-201ENST00000287814 COL6A1P12109 1028 aa22.75■■□□□ 1.23
TIMP4-201ENST00000287814 CCSAPQ6IQ19 270 aaPredicted RBP22.75■■□□□ 1.23
TIMP4-201ENST00000287814 TLK2Q86UE8 772 aa22.75■■□□□ 1.23
TIMP4-201ENST00000287814 ALG1Q9BT22 464 aa22.75■■□□□ 1.23
TIMP4-201ENST00000287814 C6orf222P0C671 652 aaPredicted RBP22.74■■□□□ 1.23
TIMP4-201ENST00000287814 AP3B2Q13367 1082 aa22.74■■□□□ 1.23
TIMP4-201ENST00000287814 TTLL4Q14679 1199 aa22.74■■□□□ 1.23
TIMP4-201ENST00000287814 REXO1Q8N1G1 1221 aaKnown RBP22.74■■□□□ 1.23
TIMP4-201ENST00000287814 INPP4AQ96PE3 977 aaPredicted RBP22.74■■□□□ 1.23
TIMP4-201ENST00000287814 DDX41Q9UJV9 622 aaKnown RBP22.74■■□□□ 1.23
TIMP4-201ENST00000287814 NKX3-2P78367 333 aa22.74■■□□□ 1.23
TIMP4-201ENST00000287814 BEX3Q00994 111 aa22.74■■□□□ 1.23
TIMP4-201ENST00000287814 SP2Q02086 613 aa22.74■■□□□ 1.23
TIMP4-201ENST00000287814 SEMA3FQ13275 785 aa22.74■■□□□ 1.23
TIMP4-201ENST00000287814 NECAB2Q7Z6G3 386 aa22.74■■□□□ 1.23
TIMP4-201ENST00000287814 RNF180Q86T96 592 aa22.74■■□□□ 1.23
TIMP4-201ENST00000287814 LLPHQ9BRT6 129 aaKnown RBP22.74■■□□□ 1.23
TIMP4-201ENST00000287814 PHF20Q9BVI0 1012 aa22.74■■□□□ 1.23
TIMP4-201ENST00000287814 PCDHA4Q9UN74 947 aa22.74■■□□□ 1.23
TIMP4-201ENST00000287814 Q9Y3F1 56 aa22.74■■□□□ 1.23
TIMP4-201ENST00000287814 M0R2N6 131 aa22.73■■□□□ 1.23
TIMP4-201ENST00000287814 ITGB5P18084 799 aa22.73■■□□□ 1.23
TIMP4-201ENST00000287814 XRRA1Q6P2D8 792 aa22.73■■□□□ 1.23
TIMP4-201ENST00000287814 C11orf49Q9H6J7 331 aa22.73■■□□□ 1.23
TIMP4-201ENST00000287814 MRVI1Q9Y6F6 885 aa22.73■■□□□ 1.23
TIMP4-201ENST00000287814 DNAH12Q6ZR08 3092 aa22.72■■□□□ 1.23
TIMP4-201ENST00000287814 SREBF1P36956 1147 aa22.72■■□□□ 1.23
TIMP4-201ENST00000287814 MCM2P49736 904 aa22.72■■□□□ 1.23
TIMP4-201ENST00000287814 KCNA10Q16322 511 aa22.72■■□□□ 1.23
TIMP4-201ENST00000287814 BLIDQ8IZY5 108 aa22.72■■□□□ 1.23
TIMP4-201ENST00000287814 BICD2Q8TD16 824 aa22.72■■□□□ 1.23
TIMP4-201ENST00000287814 CRYGNQ8WXF5 182 aa22.72■■□□□ 1.23
TIMP4-201ENST00000287814 WASF1Q92558 559 aa22.72■■□□□ 1.23
TIMP4-201ENST00000287814 AP5M1Q9H0R1 490 aa22.72■■□□□ 1.23
TIMP4-201ENST00000287814 BCAS3Q9H6U6 928 aa22.72■■□□□ 1.23
TIMP4-201ENST00000287814 UBIAD1Q9Y5Z9 338 aa22.72■■□□□ 1.23
TIMP4-201ENST00000287814 KBTBD13C9JR72 458 aa22.71■■□□□ 1.23
TIMP4-201ENST00000287814 STAM2O75886 525 aa22.71■■□□□ 1.23
TIMP4-201ENST00000287814 CST5P28325 142 aaPredicted RBP22.71■■□□□ 1.23
TIMP4-201ENST00000287814 GNASQ5JWF2 1037 aa22.71■■□□□ 1.23
TIMP4-201ENST00000287814 FAM177A1Q8N128 213 aaPredicted RBP22.71■■□□□ 1.23
TIMP4-201ENST00000287814 DAGLBQ8NCG7 672 aa22.71■■□□□ 1.23
TIMP4-201ENST00000287814 CYP2W1Q8TAV3 490 aa22.71■■□□□ 1.23
TIMP4-201ENST00000287814 SENP6Q9GZR1 1112 aaPredicted RBP22.71■■□□□ 1.23
TIMP4-201ENST00000287814 KIAA1217Q5T5P2 1943 aa22.71■■□□□ 1.23
TIMP4-201ENST00000287814 SPATA31C2B4DYI2 1134 aa22.71■■□□□ 1.23
TIMP4-201ENST00000287814 NKRFO15226 690 aaKnown RBP eCLIP22.71■■□□□ 1.23
TIMP4-201ENST00000287814 EDIL3O43854 480 aa22.71■■□□□ 1.23
TIMP4-201ENST00000287814 ICAM3P32942 547 aa22.71■■□□□ 1.23
TIMP4-201ENST00000287814 FOSBP53539 338 aa22.71■■□□□ 1.23
TIMP4-201ENST00000287814 ARHGAP4P98171 946 aa22.71■■□□□ 1.23
TIMP4-201ENST00000287814 OR6J1Q8NGC5 347 aa22.71■■□□□ 1.23
TIMP4-201ENST00000287814 FERMT2Q96AC1 680 aa22.71■■□□□ 1.23
TIMP4-201ENST00000287814 EHMT1Q9H9B1 1298 aa22.71■■□□□ 1.23
TIMP4-201ENST00000287814 SPC25Q9HBM1 224 aa22.71■■□□□ 1.23
TIMP4-201ENST00000287814 PHF24Q9UPV7 400 aa22.71■■□□□ 1.23
TIMP4-201ENST00000287814 TNRC18O15417 2968 aaPredicted RBP22.71■■□□□ 1.23
TIMP4-201ENST00000287814 MLLT1Q03111 559 aaPredicted RBP22.7■■□□□ 1.22
TIMP4-201ENST00000287814 ARHGAP1Q07960 439 aa22.7■■□□□ 1.22
TIMP4-201ENST00000287814 FSCN1Q16658 493 aaKnown RBP22.7■■□□□ 1.22
TIMP4-201ENST00000287814 OXER1Q8TDS5 423 aa22.7■■□□□ 1.22
TIMP4-201ENST00000287814 SORBS3O60504 671 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms