RNA–Protein interactions for RNA: ENST00000278100.10

BCCIP-201, Transcript of BRCA2 and CDKN1A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BCCIP, Length 1,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCCIP-201ENST00000278100 CYTH3O43739 400 aa13.37□□□□□ -0.27
BCCIP-201ENST00000278100 B4GALT4O60513 344 aa13.37□□□□□ -0.27
BCCIP-201ENST00000278100 PLEKHA8P1O95397 391 aa13.37□□□□□ -0.27
BCCIP-201ENST00000278100 PARP1P09874 1014 aaKnown RBP13.37□□□□□ -0.27
BCCIP-201ENST00000278100 CALML3P27482 149 aa13.37□□□□□ -0.27
BCCIP-201ENST00000278100 ITGA7Q13683 1181 aa13.37□□□□□ -0.27
BCCIP-201ENST00000278100 CDC37Q16543 378 aaPredicted RBP13.37□□□□□ -0.27
BCCIP-201ENST00000278100 QRICH1Q2TAL8 776 aa13.37□□□□□ -0.27
BCCIP-201ENST00000278100 PPP2R2DQ66LE6 453 aa13.37□□□□□ -0.27
BCCIP-201ENST00000278100 BTNL9Q6UXG8 535 aa13.37□□□□□ -0.27
BCCIP-201ENST00000278100 FBXO16Q8IX29 292 aaPredicted RBP13.37□□□□□ -0.27
BCCIP-201ENST00000278100 CLEC4DQ8WXI8 215 aa13.37□□□□□ -0.27
BCCIP-201ENST00000278100 SCLYQ96I15 445 aa13.37□□□□□ -0.27
BCCIP-201ENST00000278100 PIGSQ96S52 555 aa13.37□□□□□ -0.27
BCCIP-201ENST00000278100 AP5M1Q9H0R1 490 aa13.37□□□□□ -0.27
BCCIP-201ENST00000278100 MTIF3Q9H2K0 278 aaKnown RBP13.37□□□□□ -0.27
BCCIP-201ENST00000278100 ACAD9Q9H845 621 aa13.37□□□□□ -0.27
BCCIP-201ENST00000278100 CNNM2Q9H8M5 875 aa13.37□□□□□ -0.27
BCCIP-201ENST00000278100 PDGFCQ9NRA1 345 aa13.37□□□□□ -0.27
BCCIP-201ENST00000278100 BRPF3Q9ULD4 1205 aa13.37□□□□□ -0.27
BCCIP-201ENST00000278100 SNX14Q9Y5W7 946 aa13.37□□□□□ -0.27
BCCIP-201ENST00000278100 LAMA4Q16363 1823 aa13.36□□□□□ -0.27
BCCIP-201ENST00000278100 PTPDC1A2A3K4 754 aa13.36□□□□□ -0.27
BCCIP-201ENST00000278100 KLRF2D3W0D1 207 aa13.36□□□□□ -0.27
BCCIP-201ENST00000278100 DYNC1LI2O43237 492 aaPredicted RBP13.36□□□□□ -0.27
BCCIP-201ENST00000278100 SMPD1P17405 629 aa13.36□□□□□ -0.27
BCCIP-201ENST00000278100 TFF2Q03403 129 aa13.36□□□□□ -0.27
BCCIP-201ENST00000278100 SKIV2LQ15477 1246 aaKnown RBP13.36□□□□□ -0.27
BCCIP-201ENST00000278100 FSCN1Q16658 493 aaKnown RBP13.36□□□□□ -0.27
BCCIP-201ENST00000278100 NFXL1Q6ZNB6 911 aa13.36□□□□□ -0.27
BCCIP-201ENST00000278100 FAM133AQ8N9E0 248 aa13.36□□□□□ -0.27
BCCIP-201ENST00000278100 NOC4LQ9BVI4 516 aaKnown RBP13.36□□□□□ -0.27
BCCIP-201ENST00000278100 WNT8AQ9H1J5 351 aa13.36□□□□□ -0.27
BCCIP-201ENST00000278100 COL20A1Q9P218 1284 aa13.36□□□□□ -0.27
BCCIP-201ENST00000278100 NAP1L2Q9ULW6 460 aaPredicted RBP13.36□□□□□ -0.27
BCCIP-201ENST00000278100 GRIN2DO15399 1336 aa13.36□□□□□ -0.27
BCCIP-201ENST00000278100 SCN5AQ14524 2016 aa13.35□□□□□ -0.27
BCCIP-201ENST00000278100 CHD9Q3L8U1 2897 aa13.35□□□□□ -0.27
BCCIP-201ENST00000278100 LCTP09848 1927 aa13.35□□□□□ -0.27
BCCIP-201ENST00000278100 SORBS3O60504 671 aa13.35□□□□□ -0.27
BCCIP-201ENST00000278100 ICAM1P05362 532 aa13.35□□□□□ -0.27
BCCIP-201ENST00000278100 PCP11498 1178 aaKnown RBP13.35□□□□□ -0.27
BCCIP-201ENST00000278100 OAZ1P54368 228 aa13.35□□□□□ -0.27
BCCIP-201ENST00000278100 GRM4Q14833 912 aa13.35□□□□□ -0.27
BCCIP-201ENST00000278100 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.35□□□□□ -0.27
BCCIP-201ENST00000278100 ZNF654Q8IZM8 581 aa13.35□□□□□ -0.27
BCCIP-201ENST00000278100 SLC43A3Q8NBI5 491 aa13.35□□□□□ -0.27
BCCIP-201ENST00000278100 JAKMIP1Q96N16 626 aaKnown RBP13.35□□□□□ -0.27
BCCIP-201ENST00000278100 NEK1Q96PY6 1258 aa13.35□□□□□ -0.27
BCCIP-201ENST00000278100 CERS4Q9HA82 394 aa13.35□□□□□ -0.27
BCCIP-201ENST00000278100 GNEQ9Y223 722 aaKnown RBP13.35□□□□□ -0.27
BCCIP-201ENST00000278100 SLC4A7Q9Y6M7 1214 aa13.35□□□□□ -0.27
BCCIP-201ENST00000278100 MUC3AQ02505 3323 aa13.35□□□□□ -0.27
BCCIP-201ENST00000278100 PALM3A6NDB9 673 aaPredicted RBP13.34□□□□□ -0.27
BCCIP-201ENST00000278100 ASB14A6NK59 587 aa13.34□□□□□ -0.27
BCCIP-201ENST00000278100 RFXAPO00287 272 aa13.34□□□□□ -0.27
BCCIP-201ENST00000278100 EXOSC10Q01780 885 aaKnown RBP13.34□□□□□ -0.27
BCCIP-201ENST00000278100 APOBRQ0VD83 1088 aa13.34□□□□□ -0.27
BCCIP-201ENST00000278100 TROAPQ12815 778 aa13.34□□□□□ -0.27
BCCIP-201ENST00000278100 DEFB128Q7Z7B8 93 aa13.34□□□□□ -0.27
BCCIP-201ENST00000278100 HS3ST6Q96QI5 342 aa13.34□□□□□ -0.27
BCCIP-201ENST00000278100 TAAR1Q96RJ0 339 aa13.34□□□□□ -0.27
BCCIP-201ENST00000278100 CYP39A1Q9NYL5 469 aa13.34□□□□□ -0.27
BCCIP-201ENST00000278100 SYNPO2Q9UMS6 1093 aa13.34□□□□□ -0.27
BCCIP-201ENST00000278100 ZEB2O60315 1214 aa13.33□□□□□ -0.28
BCCIP-201ENST00000278100 PLA2G6O60733 806 aa13.33□□□□□ -0.28
BCCIP-201ENST00000278100 CABYRO75952 493 aa13.33□□□□□ -0.28
BCCIP-201ENST00000278100 CYP2C9P11712 490 aa13.33□□□□□ -0.28
BCCIP-201ENST00000278100 ATP2A2P16615 1042 aaKnown RBP13.33□□□□□ -0.28
BCCIP-201ENST00000278100 HOXA13P31271 388 aaPredicted RBP13.33□□□□□ -0.28
BCCIP-201ENST00000278100 MCM5P33992 734 aa13.33□□□□□ -0.28
BCCIP-201ENST00000278100 KCNQ1P51787 676 aa13.33□□□□□ -0.28
BCCIP-201ENST00000278100 NKX3-2P78367 333 aa13.33□□□□□ -0.28
BCCIP-201ENST00000278100 CASC1Q6TDU7 716 aa13.33□□□□□ -0.28
BCCIP-201ENST00000278100 SRBD1Q8N5C6 995 aaKnown RBP13.33□□□□□ -0.28
BCCIP-201ENST00000278100 USP26Q9BXU7 913 aa13.33□□□□□ -0.28
BCCIP-201ENST00000278100 TRMT13Q9NUP7 481 aaKnown RBP13.33□□□□□ -0.28
BCCIP-201ENST00000278100 PCDHB13Q9Y5F0 798 aa13.33□□□□□ -0.28
BCCIP-201ENST00000278100 ERICH2A1L162 156 aa13.32□□□□□ -0.28
BCCIP-201ENST00000278100 CCDC69A6NI79 296 aa13.32□□□□□ -0.28
BCCIP-201ENST00000278100 OPLAHO14841 1288 aa13.32□□□□□ -0.28
BCCIP-201ENST00000278100 ADAMTS3O15072 1205 aa13.32□□□□□ -0.28
BCCIP-201ENST00000278100 MYL3P08590 195 aa13.32□□□□□ -0.28
BCCIP-201ENST00000278100 HSPA4P34932 840 aa13.32□□□□□ -0.28
BCCIP-201ENST00000278100 TTLL4Q14679 1199 aa13.32□□□□□ -0.28
BCCIP-201ENST00000278100 PPP4R3BQ5MIZ7 849 aa13.32□□□□□ -0.28
BCCIP-201ENST00000278100 KRT40Q6A162 431 aa13.32□□□□□ -0.28
BCCIP-201ENST00000278100 TAPT1Q6NXT6 567 aa13.32□□□□□ -0.28
BCCIP-201ENST00000278100 Q6ZUG5 572 aa13.32□□□□□ -0.28
BCCIP-201ENST00000278100 MICU3Q86XE3 530 aa13.32□□□□□ -0.28
BCCIP-201ENST00000278100 UPF3BQ9BZI7 483 aaKnown RBP13.32□□□□□ -0.28
BCCIP-201ENST00000278100 CA3P07451 260 aa13.31□□□□□ -0.28
BCCIP-201ENST00000278100 CDC27P30260 824 aa13.31□□□□□ -0.28
BCCIP-201ENST00000278100 RPS6P62753 249 aaKnown RBP13.31□□□□□ -0.28
BCCIP-201ENST00000278100 TKFCQ3LXA3 575 aa13.31□□□□□ -0.28
BCCIP-201ENST00000278100 ASPRV1Q53RT3 343 aa13.31□□□□□ -0.28
BCCIP-201ENST00000278100 CCDC178Q5BJE1 867 aa13.31□□□□□ -0.28
BCCIP-201ENST00000278100 CATIPQ7Z7H3 387 aa13.31□□□□□ -0.28
BCCIP-201ENST00000278100 FBXO11Q86XK2 927 aa13.31□□□□□ -0.28
BCCIP-201ENST00000278100 RPUSD2Q8IZ73 545 aaKnown RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms