RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 PPP2R5DQ14738 602 aa12.34□□□□□ -0.43
USP6NL-201ENST00000277575 SPOUT1Q5T280 376 aaKnown RBP12.34□□□□□ -0.43
USP6NL-201ENST00000277575 CEP95Q96GE4 821 aa12.34□□□□□ -0.43
USP6NL-201ENST00000277575 EMILIN3Q9NT22 766 aa12.34□□□□□ -0.43
USP6NL-201ENST00000277575 NMT2O60551 498 aa12.34□□□□□ -0.43
USP6NL-201ENST00000277575 ATF7P17544 494 aaPredicted RBP12.34□□□□□ -0.43
USP6NL-201ENST00000277575 MAPK8IP2Q13387 824 aaPredicted RBP12.34□□□□□ -0.43
USP6NL-201ENST00000277575 CROCCP2Q86T23 111 aa12.34□□□□□ -0.43
USP6NL-201ENST00000277575 TTLL3Q9Y4R7 772 aa12.34□□□□□ -0.43
USP6NL-201ENST00000277575 PTPREP23469 700 aa12.34□□□□□ -0.43
USP6NL-201ENST00000277575 GPSM2P81274 684 aa12.34□□□□□ -0.43
USP6NL-201ENST00000277575 MYL7Q01449 175 aa12.34□□□□□ -0.43
USP6NL-201ENST00000277575 SETDB1Q15047 1291 aa12.34□□□□□ -0.43
USP6NL-201ENST00000277575 MIS18BP1Q6P0N0 1132 aa12.34□□□□□ -0.43
USP6NL-201ENST00000277575 SCYL2Q6P3W7 929 aa12.34□□□□□ -0.43
USP6NL-201ENST00000277575 CCDC89Q8N998 374 aa12.34□□□□□ -0.43
USP6NL-201ENST00000277575 GDAP1L1Q96MZ0 367 aa12.34□□□□□ -0.43
USP6NL-201ENST00000277575 ACCSQ96QU6 501 aa12.34□□□□□ -0.43
USP6NL-201ENST00000277575 RAB17Q9H0T7 212 aa12.34□□□□□ -0.43
USP6NL-201ENST00000277575 PARVGQ9HBI0 331 aa12.34□□□□□ -0.43
USP6NL-201ENST00000277575 SH3GLB2Q9NR46 395 aa12.34□□□□□ -0.43
USP6NL-201ENST00000277575 WDR19Q8NEZ3 1342 aa12.34□□□□□ -0.43
USP6NL-201ENST00000277575 GOLGA6CA6NDK9 693 aa12.34□□□□□ -0.43
USP6NL-201ENST00000277575 ZBTB5O15062 677 aa12.34□□□□□ -0.43
USP6NL-201ENST00000277575 GOLGA6DP0CG33 693 aa12.34□□□□□ -0.43
USP6NL-201ENST00000277575 NSFP46459 744 aaKnown RBP12.34□□□□□ -0.43
USP6NL-201ENST00000277575 BPIFB4P59827 614 aa12.34□□□□□ -0.43
USP6NL-201ENST00000277575 PFKFB3Q16875 520 aaPredicted RBP12.34□□□□□ -0.43
USP6NL-201ENST00000277575 CFAP157Q5JU67 520 aa12.34□□□□□ -0.43
USP6NL-201ENST00000277575 PLCD3Q8N3E9 789 aa12.34□□□□□ -0.43
USP6NL-201ENST00000277575 AFAP1L1Q8TED9 768 aa12.34□□□□□ -0.43
USP6NL-201ENST00000277575 BHMT2Q9H2M3 363 aa12.34□□□□□ -0.43
USP6NL-201ENST00000277575 SAMSN1Q9NSI8 373 aaKnown RBP12.34□□□□□ -0.43
USP6NL-201ENST00000277575 GOLGA6AQ9NYA3 693 aa12.34□□□□□ -0.43
USP6NL-201ENST00000277575 BZW2Q9Y6E2 419 aaKnown RBP12.34□□□□□ -0.43
USP6NL-201ENST00000277575 CROCC2H7BZ55 1655 aa12.33□□□□□ -0.43
USP6NL-201ENST00000277575 PTPRMP28827 1452 aa12.33□□□□□ -0.43
USP6NL-201ENST00000277575 PALM3A6NDB9 673 aaPredicted RBP12.33□□□□□ -0.44
USP6NL-201ENST00000277575 KRIT1O00522 736 aa12.33□□□□□ -0.44
USP6NL-201ENST00000277575 CCND2P30279 289 aa12.33□□□□□ -0.44
USP6NL-201ENST00000277575 CASC4Q6P4E1 433 aa12.33□□□□□ -0.44
USP6NL-201ENST00000277575 RETREG2Q8NC44 543 aa12.33□□□□□ -0.44
USP6NL-201ENST00000277575 RAB3IL1Q8TBN0 382 aa12.33□□□□□ -0.44
USP6NL-201ENST00000277575 DCAF4Q8WV16 495 aa12.33□□□□□ -0.44
USP6NL-201ENST00000277575 PAGE5Q96GU1 130 aa12.33□□□□□ -0.44
USP6NL-201ENST00000277575 PLA2G12BQ9BX93 195 aa12.33□□□□□ -0.44
USP6NL-201ENST00000277575 LY9Q9HBG7 655 aa12.33□□□□□ -0.44
USP6NL-201ENST00000277575 AKT3Q9Y243 479 aa12.33□□□□□ -0.44
USP6NL-201ENST00000277575 PSDA5PKW4 1024 aaPredicted RBP12.33□□□□□ -0.44
USP6NL-201ENST00000277575 CAPN9O14815 690 aa12.33□□□□□ -0.44
USP6NL-201ENST00000277575 VPS72Q15906 364 aa12.33□□□□□ -0.44
USP6NL-201ENST00000277575 HADHQ16836 314 aaKnown RBP12.33□□□□□ -0.44
USP6NL-201ENST00000277575 MTERF2Q49AM1 385 aa12.33□□□□□ -0.44
USP6NL-201ENST00000277575 PDXDC2PQ6P474 469 aa12.33□□□□□ -0.44
USP6NL-201ENST00000277575 SESTD1Q86VW0 696 aa12.33□□□□□ -0.44
USP6NL-201ENST00000277575 SP8Q8IXZ3 490 aa12.33□□□□□ -0.44
USP6NL-201ENST00000277575 MARCH10Q8NA82 808 aaPredicted RBP12.33□□□□□ -0.44
USP6NL-201ENST00000277575 SLC10A4Q96EP9 437 aa12.33□□□□□ -0.44
USP6NL-201ENST00000277575 CEP63Q96MT8 703 aa12.33□□□□□ -0.44
USP6NL-201ENST00000277575 MIS12Q9H081 205 aa12.33□□□□□ -0.44
USP6NL-201ENST00000277575 DISC1Q9NRI5 854 aa12.33□□□□□ -0.44
USP6NL-201ENST00000277575 AFPP02771 609 aaKnown RBP12.33□□□□□ -0.44
USP6NL-201ENST00000277575 MNAT1P51948 309 aa12.33□□□□□ -0.44
USP6NL-201ENST00000277575 AP3B2Q13367 1082 aa12.33□□□□□ -0.44
USP6NL-201ENST00000277575 PPP2R5EQ16537 467 aa12.33□□□□□ -0.44
USP6NL-201ENST00000277575 ERCC6LQ2NKX8 1250 aa12.33□□□□□ -0.44
USP6NL-201ENST00000277575 GABPB2Q8TAK5 448 aaPredicted RBP12.33□□□□□ -0.44
USP6NL-201ENST00000277575 NSMCE1Q8WV22 266 aa12.33□□□□□ -0.44
USP6NL-201ENST00000277575 PPM1EQ8WY54 764 aa12.33□□□□□ -0.44
USP6NL-201ENST00000277575 AP5M1Q9H0R1 490 aa12.33□□□□□ -0.44
USP6NL-201ENST00000277575 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.33□□□□□ -0.44
USP6NL-201ENST00000277575 STK36Q9NRP7 1315 aa12.33□□□□□ -0.44
USP6NL-201ENST00000277575 ZNF500O60304 480 aaPredicted RBP12.32□□□□□ -0.44
USP6NL-201ENST00000277575 PIK3CAP42336 1068 aa12.32□□□□□ -0.44
USP6NL-201ENST00000277575 RCAN1P53805 252 aa12.32□□□□□ -0.44
USP6NL-201ENST00000277575 PTPN21Q16825 1174 aa12.32□□□□□ -0.44
USP6NL-201ENST00000277575 KRT71Q3SY84 523 aa12.32□□□□□ -0.44
USP6NL-201ENST00000277575 APOL6Q9BWW8 343 aa12.32□□□□□ -0.44
USP6NL-201ENST00000277575 PCIF1Q9H4Z3 704 aa12.32□□□□□ -0.44
USP6NL-201ENST00000277575 TMEM206Q9H813 350 aa12.32□□□□□ -0.44
USP6NL-201ENST00000277575 ZNF277Q9NRM2 450 aaPredicted RBP12.32□□□□□ -0.44
USP6NL-201ENST00000277575 ZNF215Q9UL58 517 aaPredicted RBP12.32□□□□□ -0.44
USP6NL-201ENST00000277575 NDUFAB1O14561 156 aa12.32□□□□□ -0.44
USP6NL-201ENST00000277575 MFAP3P55082 362 aa12.32□□□□□ -0.44
USP6NL-201ENST00000277575 ITIH3Q06033 890 aa12.32□□□□□ -0.44
USP6NL-201ENST00000277575 RNF207Q6ZRF8 634 aa12.32□□□□□ -0.44
USP6NL-201ENST00000277575 MED10Q9BTT4 135 aa12.32□□□□□ -0.44
USP6NL-201ENST00000277575 RAB20Q9NX57 234 aa12.32□□□□□ -0.44
USP6NL-201ENST00000277575 NUB1Q9Y5A7 615 aa12.32□□□□□ -0.44
USP6NL-201ENST00000277575 RNF8O76064 485 aa12.32□□□□□ -0.44
USP6NL-201ENST00000277575 VPS41P49754 854 aa12.32□□□□□ -0.44
USP6NL-201ENST00000277575 SF3B3Q15393 1217 aaKnown RBP12.32□□□□□ -0.44
USP6NL-201ENST00000277575 FAM83BQ5T0W9 1011 aa12.32□□□□□ -0.44
USP6NL-201ENST00000277575 ZNF34Q8IZ26 560 aa12.32□□□□□ -0.44
USP6NL-201ENST00000277575 RWDD2AQ9UIY3 292 aa12.32□□□□□ -0.44
USP6NL-201ENST00000277575 LAMC1P11047 1609 aa12.32□□□□□ -0.44
USP6NL-201ENST00000277575 DIP2CQ9Y2E4 1556 aa12.32□□□□□ -0.44
USP6NL-201ENST00000277575 USP17L15C9J2P7 530 aa12.32□□□□□ -0.44
USP6NL-201ENST00000277575 USP17L13C9JLJ4 530 aa12.32□□□□□ -0.44
USP6NL-201ENST00000277575 USP17L11C9JVI0 530 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms