RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 ERCC5P28715 1186 aaPredicted RBP16.03■□□□□ 0.16
PDLIM2-201ENST00000265810 RBM46Q8TBY0 533 aaKnown RBP16.03■□□□□ 0.16
PDLIM2-201ENST00000265810 FAM198AQ9UFP1 575 aa16.03■□□□□ 0.16
PDLIM2-201ENST00000265810 SEPT9Q9UHD8 586 aaPredicted RBP16.03■□□□□ 0.16
PDLIM2-201ENST00000265810 CUL4BQ13620 913 aa16.03■□□□□ 0.16
PDLIM2-201ENST00000265810 LZTFL1Q9NQ48 299 aa16.03■□□□□ 0.16
PDLIM2-201ENST00000265810 ADARB2Q9NS39 739 aaKnown RBP16.03■□□□□ 0.16
PDLIM2-201ENST00000265810 FBXO40Q9UH90 709 aa16.03■□□□□ 0.16
PDLIM2-201ENST00000265810 USP11P51784 963 aa16.03■□□□□ 0.16
PDLIM2-201ENST00000265810 POLGP54098 1239 aaPredicted RBP16.03■□□□□ 0.16
PDLIM2-201ENST00000265810 ZNF658Q5TYW1 1059 aaPredicted RBP16.03■□□□□ 0.16
PDLIM2-201ENST00000265810 NSUN6Q8TEA1 469 aaKnown RBP16.03■□□□□ 0.16
PDLIM2-201ENST00000265810 PIGOQ8TEQ8 1089 aa16.03■□□□□ 0.16
PDLIM2-201ENST00000265810 GJA10Q969M2 543 aa16.03■□□□□ 0.16
PDLIM2-201ENST00000265810 ALS2CR12Q96Q35 445 aa16.03■□□□□ 0.16
PDLIM2-201ENST00000265810 TMCO5BA8MYB1 307 aa16.02■□□□□ 0.16
PDLIM2-201ENST00000265810 SPECC1LQ69YQ0 1117 aa16.02■□□□□ 0.16
PDLIM2-201ENST00000265810 FAM20AQ96MK3 541 aa16.02■□□□□ 0.16
PDLIM2-201ENST00000265810 NRBP2Q9NSY0 501 aa16.02■□□□□ 0.16
PDLIM2-201ENST00000265810 CNGA1P29973 690 aa16.02■□□□□ 0.16
PDLIM2-201ENST00000265810 MRIQ9BWK5 157 aa16.02■□□□□ 0.16
PDLIM2-201ENST00000265810 NOD1Q9Y239 953 aa16.02■□□□□ 0.16
PDLIM2-201ENST00000265810 MYL1P05976 194 aa16.02■□□□□ 0.15
PDLIM2-201ENST00000265810 SETQ01105 290 aaPredicted RBP16.02■□□□□ 0.15
PDLIM2-201ENST00000265810 ADAM9Q13443 819 aa16.02■□□□□ 0.15
PDLIM2-201ENST00000265810 DHX37Q8IY37 1157 aaKnown RBP16.02■□□□□ 0.15
PDLIM2-201ENST00000265810 CEP170P1Q96L14 293 aa16.02■□□□□ 0.15
PDLIM2-201ENST00000265810 DNAI2Q9GZS0 605 aa16.02■□□□□ 0.15
PDLIM2-201ENST00000265810 FAM207AQ9NSI2 230 aaPredicted RBP16.02■□□□□ 0.15
PDLIM2-201ENST00000265810 HSP90AA2PQ14568 343 aaPredicted RBP16.02■□□□□ 0.15
PDLIM2-201ENST00000265810 KMT5BQ4FZB7 885 aa16.02■□□□□ 0.15
PDLIM2-201ENST00000265810 SCYL3Q8IZE3 742 aa16.02■□□□□ 0.15
PDLIM2-201ENST00000265810 RUFY1Q96T51 708 aa16.02■□□□□ 0.15
PDLIM2-201ENST00000265810 ACAD9Q9H845 621 aa16.02■□□□□ 0.15
PDLIM2-201ENST00000265810 IGBP1P78318 339 aa16.01■□□□□ 0.15
PDLIM2-201ENST00000265810 DOT1LQ8TEK3 1739 aa16.01■□□□□ 0.15
PDLIM2-201ENST00000265810 DRC1Q96MC2 740 aa16.01■□□□□ 0.15
PDLIM2-201ENST00000265810 IWS1Q96ST2 819 aa16.01■□□□□ 0.15
PDLIM2-201ENST00000265810 FAM217BQ9NTX9 383 aaPredicted RBP16.01■□□□□ 0.15
PDLIM2-201ENST00000265810 IMPACTQ9P2X3 320 aa16.01■□□□□ 0.15
PDLIM2-201ENST00000265810 AK9Q5TCS8 1911 aa16.01■□□□□ 0.15
PDLIM2-201ENST00000265810 FOXN1O15353 648 aa16.01■□□□□ 0.15
PDLIM2-201ENST00000265810 KRT83P78385 493 aa16.01■□□□□ 0.15
PDLIM2-201ENST00000265810 USP49Q70CQ1 688 aa16.01■□□□□ 0.15
PDLIM2-201ENST00000265810 DPF2Q92785 391 aa16.01■□□□□ 0.15
PDLIM2-201ENST00000265810 E9PMD0 336 aa16.01■□□□□ 0.15
PDLIM2-201ENST00000265810 KIF5AQ12840 1032 aa16.01■□□□□ 0.15
PDLIM2-201ENST00000265810 TRIM14Q14142 442 aa16.01■□□□□ 0.15
PDLIM2-201ENST00000265810 BEGAINQ9BUH8 593 aa16.01■□□□□ 0.15
PDLIM2-201ENST00000265810 JADE2Q9NQC1 790 aa16.01■□□□□ 0.15
PDLIM2-201ENST00000265810 POTEB3A0JP26 581 aa16.01■□□□□ 0.15
PDLIM2-201ENST00000265810 POTECB2RU33 542 aa16.01■□□□□ 0.15
PDLIM2-201ENST00000265810 ADKP55263 362 aaKnown RBP16.01■□□□□ 0.15
PDLIM2-201ENST00000265810 ORC2Q13416 577 aaPredicted RBP16.01■□□□□ 0.15
PDLIM2-201ENST00000265810 STXBP2Q15833 593 aa16.01■□□□□ 0.15
PDLIM2-201ENST00000265810 FAM160B1Q5W0V3 765 aa16.01■□□□□ 0.15
PDLIM2-201ENST00000265810 IQCEQ6IPM2 695 aa16.01■□□□□ 0.15
PDLIM2-201ENST00000265810 POTEBQ6S5H4 581 aa16.01■□□□□ 0.15
PDLIM2-201ENST00000265810 AGBL1Q96MI9 1066 aa16.01■□□□□ 0.15
PDLIM2-201ENST00000265810 ZHX1Q9UKY1 873 aaPredicted RBP16.01■□□□□ 0.15
PDLIM2-201ENST00000265810 GDAQ9Y2T3 454 aa16.01■□□□□ 0.15
PDLIM2-201ENST00000265810 LRRIQ4A6NIV6 560 aa16■□□□□ 0.15
PDLIM2-201ENST00000265810 MMP14P50281 582 aa16■□□□□ 0.15
PDLIM2-201ENST00000265810 RBM10P98175 930 aaKnown RBP16■□□□□ 0.15
PDLIM2-201ENST00000265810 TEX13BQ9BXU2 312 aa16■□□□□ 0.15
PDLIM2-201ENST00000265810 POLD4Q9HCU8 107 aa16■□□□□ 0.15
PDLIM2-201ENST00000265810 ARMCX3Q9UH62 379 aaPredicted RBP16■□□□□ 0.15
PDLIM2-201ENST00000265810 KCNG1Q9UIX4 513 aa16■□□□□ 0.15
PDLIM2-201ENST00000265810 GUCA1BQ9UMX6 200 aa16■□□□□ 0.15
PDLIM2-201ENST00000265810 IKBKBO14920 756 aa16■□□□□ 0.15
PDLIM2-201ENST00000265810 MIS18BP1Q6P0N0 1132 aa16■□□□□ 0.15
PDLIM2-201ENST00000265810 FASTKD5Q7L8L6 764 aaKnown RBP16■□□□□ 0.15
PDLIM2-201ENST00000265810 C17orf53Q8N3J3 647 aaPredicted RBP16■□□□□ 0.15
PDLIM2-201ENST00000265810 SAMSN1Q9NSI8 373 aaKnown RBP16■□□□□ 0.15
PDLIM2-201ENST00000265810 TMX2Q9Y320 296 aa16■□□□□ 0.15
PDLIM2-201ENST00000265810 IPO5O00410 1097 aaKnown RBP16■□□□□ 0.15
PDLIM2-201ENST00000265810 XRCC5P13010 732 aaKnown RBP16■□□□□ 0.15
PDLIM2-201ENST00000265810 DESP17661 470 aa16■□□□□ 0.15
PDLIM2-201ENST00000265810 DMP1Q13316 513 aaPredicted RBP16■□□□□ 0.15
PDLIM2-201ENST00000265810 BAATQ14032 418 aaPredicted RBP16■□□□□ 0.15
PDLIM2-201ENST00000265810 PKN1Q16512 942 aa16■□□□□ 0.15
PDLIM2-201ENST00000265810 PTPN21Q16825 1174 aa16■□□□□ 0.15
PDLIM2-201ENST00000265810 DDX12PQ92771 950 aa16■□□□□ 0.15
PDLIM2-201ENST00000265810 P2RX5Q93086 422 aa16■□□□□ 0.15
PDLIM2-201ENST00000265810 ATG4CQ96DT6 458 aa16■□□□□ 0.15
PDLIM2-201ENST00000265810 DHTKD1Q96HY7 919 aaPredicted RBP16■□□□□ 0.15
PDLIM2-201ENST00000265810 NLRC4Q9NPP4 1024 aa16■□□□□ 0.15
PDLIM2-201ENST00000265810 PRR29P0C7W0 189 aa15.99■□□□□ 0.15
PDLIM2-201ENST00000265810 EPHX2P34913 555 aa15.99■□□□□ 0.15
PDLIM2-201ENST00000265810 CEP55Q53EZ4 464 aa15.99■□□□□ 0.15
PDLIM2-201ENST00000265810 GPC2Q8N158 579 aa15.99■□□□□ 0.15
PDLIM2-201ENST00000265810 NUP58Q9BVL2 599 aa15.99■□□□□ 0.15
PDLIM2-201ENST00000265810 ZSWIM4Q9H7M6 989 aa15.99■□□□□ 0.15
PDLIM2-201ENST00000265810 SFI1A8K8P3 1242 aa15.99■□□□□ 0.15
PDLIM2-201ENST00000265810 PAFAH1B1P43034 410 aa15.99■□□□□ 0.15
PDLIM2-201ENST00000265810 KIF22Q14807 665 aa15.99■□□□□ 0.15
PDLIM2-201ENST00000265810 PDXDC2PQ6P474 469 aa15.99■□□□□ 0.15
PDLIM2-201ENST00000265810 SLC7A3Q8WY07 619 aa15.99■□□□□ 0.15
PDLIM2-201ENST00000265810 MRFAP1L1Q96HT8 127 aa15.99■□□□□ 0.15
PDLIM2-201ENST00000265810 COL18A1P39060 1754 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms