RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 PXMP2Q9NR77 195 aa14.21□□□□□ -0.13
TRAF4-202ENST00000262396 PCDHA11Q9Y5I1 949 aa14.21□□□□□ -0.13
TRAF4-202ENST00000262396 GCOM1H8Y6P7 765 aaPredicted RBP14.2□□□□□ -0.14
TRAF4-202ENST00000262396 PITPNM1O00562 1244 aa14.2□□□□□ -0.14
TRAF4-202ENST00000262396 GTPBP6O43824 516 aaPredicted RBP14.2□□□□□ -0.14
TRAF4-202ENST00000262396 SORBS3O60504 671 aa14.2□□□□□ -0.14
TRAF4-202ENST00000262396 IQCF3P0C7M6 154 aa14.2□□□□□ -0.14
TRAF4-202ENST00000262396 POLR2MP0CAP2 368 aa14.2□□□□□ -0.14
TRAF4-202ENST00000262396 CCND2P30279 289 aa14.2□□□□□ -0.14
TRAF4-202ENST00000262396 IRX6P78412 446 aaPredicted RBP14.2□□□□□ -0.14
TRAF4-202ENST00000262396 TJAP1Q5JTD0 557 aa14.2□□□□□ -0.14
TRAF4-202ENST00000262396 CAGE1Q8TC20 777 aa14.2□□□□□ -0.14
TRAF4-202ENST00000262396 PIBF1Q8WXW3 757 aa14.2□□□□□ -0.14
TRAF4-202ENST00000262396 SLC9A7Q96T83 725 aa14.2□□□□□ -0.14
TRAF4-202ENST00000262396 MLXIPQ9HAP2 919 aa14.2□□□□□ -0.14
TRAF4-202ENST00000262396 MAP3K20Q9NYL2 800 aaKnown RBP14.2□□□□□ -0.14
TRAF4-202ENST00000262396 LRRC37A2A6NM11 1700 aa14.2□□□□□ -0.14
TRAF4-202ENST00000262396 LAMA2P24043 3122 aaKnown RBP14.19□□□□□ -0.14
TRAF4-202ENST00000262396 HOXA13P31271 388 aaPredicted RBP14.19□□□□□ -0.14
TRAF4-202ENST00000262396 PSEN2P49810 448 aa14.19□□□□□ -0.14
TRAF4-202ENST00000262396 CASC1Q6TDU7 716 aa14.19□□□□□ -0.14
TRAF4-202ENST00000262396 NFXL1Q6ZNB6 911 aa14.19□□□□□ -0.14
TRAF4-202ENST00000262396 CYB5R4Q7L1T6 521 aa14.19□□□□□ -0.14
TRAF4-202ENST00000262396 CUL5Q93034 780 aa14.19□□□□□ -0.14
TRAF4-202ENST00000262396 SPATA33Q96N06 139 aa14.19□□□□□ -0.14
TRAF4-202ENST00000262396 COL20A1Q9P218 1284 aa14.19□□□□□ -0.14
TRAF4-202ENST00000262396 THEGQ9P2T0 379 aa14.19□□□□□ -0.14
TRAF4-202ENST00000262396 DDX41Q9UJV9 622 aaKnown RBP14.19□□□□□ -0.14
TRAF4-202ENST00000262396 YBX2Q9Y2T7 364 aaKnown RBP14.19□□□□□ -0.14
TRAF4-202ENST00000262396 NOP56O00567 594 aaKnown RBP14.18□□□□□ -0.14
TRAF4-202ENST00000262396 MYOGP15173 224 aa14.18□□□□□ -0.14
TRAF4-202ENST00000262396 ARHGAP1Q07960 439 aa14.18□□□□□ -0.14
TRAF4-202ENST00000262396 MFSD10Q14728 455 aa14.18□□□□□ -0.14
TRAF4-202ENST00000262396 GNPTABQ3T906 1256 aa14.18□□□□□ -0.14
TRAF4-202ENST00000262396 CCDC62Q6P9F0 684 aa14.18□□□□□ -0.14
TRAF4-202ENST00000262396 SAMD3Q8N6K7 520 aa14.18□□□□□ -0.14
TRAF4-202ENST00000262396 CTCFLQ8NI51 663 aaPredicted RBP14.18□□□□□ -0.14
TRAF4-202ENST00000262396 AFAP1L1Q8TED9 768 aa14.18□□□□□ -0.14
TRAF4-202ENST00000262396 PIGSQ96S52 555 aa14.18□□□□□ -0.14
TRAF4-202ENST00000262396 CERS4Q9HA82 394 aa14.18□□□□□ -0.14
TRAF4-202ENST00000262396 SEC63Q9UGP8 760 aaKnown RBP14.18□□□□□ -0.14
TRAF4-202ENST00000262396 MAD2L2Q9UI95 211 aa14.18□□□□□ -0.14
TRAF4-202ENST00000262396 A0A0C4DFX4 3053 aa14.18□□□□□ -0.14
TRAF4-202ENST00000262396 PNMA6FA0A0J9YX94 578 aa14.17□□□□□ -0.14
TRAF4-202ENST00000262396 TLL1O43897 1013 aa14.17□□□□□ -0.14
TRAF4-202ENST00000262396 BAIAP3O94812 1187 aa14.17□□□□□ -0.14
TRAF4-202ENST00000262396 PARNO95453 639 aaKnown RBP14.17□□□□□ -0.14
TRAF4-202ENST00000262396 GGPS1O95749 300 aa14.17□□□□□ -0.14
TRAF4-202ENST00000262396 CA3P07451 260 aa14.17□□□□□ -0.14
TRAF4-202ENST00000262396 CYP21A2P08686 494 aa14.17□□□□□ -0.14
TRAF4-202ENST00000262396 ZNF286BP0CG31 522 aa14.17□□□□□ -0.14
TRAF4-202ENST00000262396 GSPT1P15170 499 aaKnown RBP14.17□□□□□ -0.14
TRAF4-202ENST00000262396 SELPP16109 830 aa14.17□□□□□ -0.14
TRAF4-202ENST00000262396 CHMLP26374 656 aa14.17□□□□□ -0.14
TRAF4-202ENST00000262396 PDE4AP27815 886 aa14.17□□□□□ -0.14
TRAF4-202ENST00000262396 KIF5BP33176 963 aa14.17□□□□□ -0.14
TRAF4-202ENST00000262396 HSD17B4P51659 736 aa14.17□□□□□ -0.14
TRAF4-202ENST00000262396 GRM4Q14833 912 aa14.17□□□□□ -0.14
TRAF4-202ENST00000262396 SEC23AQ15436 765 aa14.17□□□□□ -0.14
TRAF4-202ENST00000262396 KIAA0753Q2KHM9 967 aa14.17□□□□□ -0.14
TRAF4-202ENST00000262396 GDF6Q6KF10 455 aaPredicted RBP14.17□□□□□ -0.14
TRAF4-202ENST00000262396 LRRC8DQ7L1W4 858 aa14.17□□□□□ -0.14
TRAF4-202ENST00000262396 USP38Q8NB14 1042 aa14.17□□□□□ -0.14
TRAF4-202ENST00000262396 PPTC7Q8NI37 304 aa14.17□□□□□ -0.14
TRAF4-202ENST00000262396 SMARCC2Q8TAQ2 1214 aa14.17□□□□□ -0.14
TRAF4-202ENST00000262396 PHOSPHO2Q8TCD6 241 aa14.17□□□□□ -0.14
TRAF4-202ENST00000262396 PDCD2LQ9BRP1 358 aa14.17□□□□□ -0.14
TRAF4-202ENST00000262396 HDAC6Q9UBN7 1215 aa14.17□□□□□ -0.14
TRAF4-202ENST00000262396 PALM3A6NDB9 673 aaPredicted RBP14.16□□□□□ -0.14
TRAF4-202ENST00000262396 CCDC69A6NI79 296 aa14.16□□□□□ -0.14
TRAF4-202ENST00000262396 E7EWF7 191 aa14.16□□□□□ -0.14
TRAF4-202ENST00000262396 MRPS5P82675 430 aaKnown RBP14.16□□□□□ -0.14
TRAF4-202ENST00000262396 PTH1RQ03431 593 aa14.16□□□□□ -0.14
TRAF4-202ENST00000262396 PGM5Q15124 567 aa14.16□□□□□ -0.14
TRAF4-202ENST00000262396 ATXN2LQ8WWM7 1075 aaKnown RBP14.16□□□□□ -0.14
TRAF4-202ENST00000262396 ARNTL2Q8WYA1 636 aa14.16□□□□□ -0.14
TRAF4-202ENST00000262396 RRP36Q96EU6 259 aaKnown RBP14.16□□□□□ -0.14
TRAF4-202ENST00000262396 PRDM6Q9NQX0 595 aa14.16□□□□□ -0.14
TRAF4-202ENST00000262396 PPFIA4O75335 1185 aa14.15□□□□□ -0.14
TRAF4-202ENST00000262396 TGFB3P10600 412 aa14.15□□□□□ -0.14
TRAF4-202ENST00000262396 ADGRE1Q14246 886 aa14.15□□□□□ -0.14
TRAF4-202ENST00000262396 CELF3Q5SZQ8 465 aaKnown RBP14.15□□□□□ -0.14
TRAF4-202ENST00000262396 SESTD1Q86VW0 696 aa14.15□□□□□ -0.14
TRAF4-202ENST00000262396 HERC6Q8IVU3 1022 aa14.15□□□□□ -0.14
TRAF4-202ENST00000262396 EMID1Q96A84 441 aaPredicted RBP14.15□□□□□ -0.14
TRAF4-202ENST00000262396 ZFP91Q96JP5 570 aaPredicted RBP14.15□□□□□ -0.14
TRAF4-202ENST00000262396 IL25Q9H293 177 aa14.15□□□□□ -0.14
TRAF4-202ENST00000262396 GTF2IRD1Q9UHL9 959 aa14.15□□□□□ -0.14
TRAF4-202ENST00000262396 LCTP09848 1927 aa14.15□□□□□ -0.14
TRAF4-202ENST00000262396 LAMA4Q16363 1823 aa14.14□□□□□ -0.15
TRAF4-202ENST00000262396 C17orf102A2RUQ5 167 aa14.14□□□□□ -0.15
TRAF4-202ENST00000262396 EFCAB14O75071 495 aa14.14□□□□□ -0.15
TRAF4-202ENST00000262396 GNAQP50148 359 aa14.14□□□□□ -0.15
TRAF4-202ENST00000262396 PTK7Q13308 1070 aa14.14□□□□□ -0.15
TRAF4-202ENST00000262396 IKBKEQ14164 716 aa14.14□□□□□ -0.15
TRAF4-202ENST00000262396 AAK1Q2M2I8 961 aa14.14□□□□□ -0.15
TRAF4-202ENST00000262396 CNKSR3Q6P9H4 555 aa14.14□□□□□ -0.15
TRAF4-202ENST00000262396 SYNE3Q6ZMZ3 975 aa14.14□□□□□ -0.15
TRAF4-202ENST00000262396 STOX1Q6ZVD7 989 aa14.14□□□□□ -0.15
TRAF4-202ENST00000262396 VSIG10LQ86VR7 867 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms