RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 KDM7AQ6ZMT4 941 aa17.48■□□□□ 0.39
PRPF40B-201ENST00000261897 FAM47EQ6ZV65 393 aa17.48■□□□□ 0.39
PRPF40B-201ENST00000261897 ACTR5Q9H9F9 607 aaPredicted RBP17.48■□□□□ 0.39
PRPF40B-201ENST00000261897 RGS16O15492 202 aaPredicted RBP17.47■□□□□ 0.39
PRPF40B-201ENST00000261897 AP1G2O75843 785 aa17.47■□□□□ 0.39
PRPF40B-201ENST00000261897 SCG2P13521 617 aa17.47■□□□□ 0.39
PRPF40B-201ENST00000261897 EVA1CP58658 441 aa17.47■□□□□ 0.39
PRPF40B-201ENST00000261897 DCAF5Q96JK2 942 aa17.47■□□□□ 0.39
PRPF40B-201ENST00000261897 ZBTB12Q9Y330 459 aaPredicted RBP17.47■□□□□ 0.39
PRPF40B-201ENST00000261897 EVI5O60447 810 aa17.47■□□□□ 0.39
PRPF40B-201ENST00000261897 UBE3CQ15386 1083 aa17.47■□□□□ 0.39
PRPF40B-201ENST00000261897 ARMC2Q8NEN0 867 aa17.47■□□□□ 0.39
PRPF40B-201ENST00000261897 TRIM51Q9BSJ1 452 aa17.47■□□□□ 0.39
PRPF40B-201ENST00000261897 TLR10Q9BXR5 811 aa17.47■□□□□ 0.39
PRPF40B-201ENST00000261897 OSBPL7Q9BZF2 842 aa17.47■□□□□ 0.39
PRPF40B-201ENST00000261897 TMEM60Q9H2L4 133 aa17.47■□□□□ 0.39
PRPF40B-201ENST00000261897 MCM8Q9UJA3 840 aa17.47■□□□□ 0.39
PRPF40B-201ENST00000261897 PXDNQ92626 1479 aa17.47■□□□□ 0.39
PRPF40B-201ENST00000261897 CYP27B1O15528 508 aa17.47■□□□□ 0.39
PRPF40B-201ENST00000261897 SRGNP10124 158 aa17.47■□□□□ 0.39
PRPF40B-201ENST00000261897 SAAL1Q96ER3 474 aa17.47■□□□□ 0.39
PRPF40B-201ENST00000261897 SMIM24O75264 130 aa17.46■□□□□ 0.39
PRPF40B-201ENST00000261897 ANP32DO95626 131 aa17.46■□□□□ 0.39
PRPF40B-201ENST00000261897 VPS41P49754 854 aa17.46■□□□□ 0.39
PRPF40B-201ENST00000261897 DNAJC10Q8IXB1 793 aa17.46■□□□□ 0.39
PRPF40B-201ENST00000261897 BLIDQ8IZY5 108 aa17.46■□□□□ 0.39
PRPF40B-201ENST00000261897 UTP11Q9Y3A2 253 aaKnown RBP17.46■□□□□ 0.39
PRPF40B-201ENST00000261897 RTL9Q8NET4 1388 aa17.46■□□□□ 0.39
PRPF40B-201ENST00000261897 SPDYE3A6NKU9 549 aa17.46■□□□□ 0.39
PRPF40B-201ENST00000261897 FGFR1OPO95684 399 aaKnown RBP17.46■□□□□ 0.39
PRPF40B-201ENST00000261897 CCNE1P24864 410 aa17.46■□□□□ 0.39
PRPF40B-201ENST00000261897 IRAK4Q9NWZ3 460 aa17.46■□□□□ 0.39
PRPF40B-201ENST00000261897 CHRM1P11229 460 aaPredicted RBP17.46■□□□□ 0.38
PRPF40B-201ENST00000261897 FNTAP49354 379 aa17.46■□□□□ 0.38
PRPF40B-201ENST00000261897 AMPD3Q01432 767 aa17.46■□□□□ 0.38
PRPF40B-201ENST00000261897 ZNF211Q13398 564 aaPredicted RBP17.46■□□□□ 0.38
PRPF40B-201ENST00000261897 RETREG2Q8NC44 543 aa17.46■□□□□ 0.38
PRPF40B-201ENST00000261897 SLC17A8Q8NDX2 589 aa17.46■□□□□ 0.38
PRPF40B-201ENST00000261897 CTNNBL1Q8WYA6 563 aaPredicted RBP17.46■□□□□ 0.38
PRPF40B-201ENST00000261897 LPIN2Q92539 896 aa17.46■□□□□ 0.38
PRPF40B-201ENST00000261897 PTPN22Q9Y2R2 807 aa17.46■□□□□ 0.38
PRPF40B-201ENST00000261897 FAM237AA0A1B0GTK4 181 aa17.45■□□□□ 0.38
PRPF40B-201ENST00000261897 PPP1R12AO14974 1030 aaPredicted RBP17.45■□□□□ 0.38
PRPF40B-201ENST00000261897 TTI1O43156 1089 aa17.45■□□□□ 0.38
PRPF40B-201ENST00000261897 PDE8BO95263 885 aa17.45■□□□□ 0.38
PRPF40B-201ENST00000261897 KIF5BP33176 963 aa17.45■□□□□ 0.38
PRPF40B-201ENST00000261897 GYG1P46976 350 aa17.45■□□□□ 0.38
PRPF40B-201ENST00000261897 LACTBP83111 547 aaPredicted RBP17.45■□□□□ 0.38
PRPF40B-201ENST00000261897 TAF11Q15544 211 aa17.45■□□□□ 0.38
PRPF40B-201ENST00000261897 ANKRD20A8PQ5CZ79 823 aa17.45■□□□□ 0.38
PRPF40B-201ENST00000261897 THEMISQ8N1K5 641 aaPredicted RBP17.45■□□□□ 0.38
PRPF40B-201ENST00000261897 PYM1Q9BRP8 204 aaKnown RBP17.45■□□□□ 0.38
PRPF40B-201ENST00000261897 RFX7Q2KHR2 1363 aa17.45■□□□□ 0.38
PRPF40B-201ENST00000261897 ZC3H4Q9UPT8 1303 aaKnown RBP17.45■□□□□ 0.38
PRPF40B-201ENST00000261897 ARID4AP29374 1257 aaPredicted RBP17.45■□□□□ 0.38
PRPF40B-201ENST00000261897 THAP9Q9H5L6 903 aa17.45■□□□□ 0.38
PRPF40B-201ENST00000261897 GSTTP1A0A1W2PQM5 241 aa17.45■□□□□ 0.38
PRPF40B-201ENST00000261897 SART1O43290 800 aaKnown RBP17.45■□□□□ 0.38
PRPF40B-201ENST00000261897 ATP2C1P98194 919 aaPredicted RBP17.45■□□□□ 0.38
PRPF40B-201ENST00000261897 RNF217Q8TC41 542 aa17.45■□□□□ 0.38
PRPF40B-201ENST00000261897 TAF1DQ9H5J8 278 aaPredicted RBP17.45■□□□□ 0.38
PRPF40B-201ENST00000261897 MCM9Q9NXL9 1143 aa17.45■□□□□ 0.38
PRPF40B-201ENST00000261897 TBK1Q9UHD2 729 aa17.45■□□□□ 0.38
PRPF40B-201ENST00000261897 SNX24Q9Y343 169 aa17.45■□□□□ 0.38
PRPF40B-201ENST00000261897 IGHMBP2P38935 993 aaKnown RBP17.44■□□□□ 0.38
PRPF40B-201ENST00000261897 SV2BQ7L1I2 683 aa17.44■□□□□ 0.38
PRPF40B-201ENST00000261897 CCDC84Q86UT8 332 aaPredicted RBP17.44■□□□□ 0.38
PRPF40B-201ENST00000261897 PARD3BQ8TEW8 1205 aa17.44■□□□□ 0.38
PRPF40B-201ENST00000261897 WHAMMQ8TF30 809 aa17.44■□□□□ 0.38
PRPF40B-201ENST00000261897 ZCWPW1Q9H0M4 648 aa17.44■□□□□ 0.38
PRPF40B-201ENST00000261897 G3BP2Q9UN86 482 aaKnown RBP17.44■□□□□ 0.38
PRPF40B-201ENST00000261897 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.44■□□□□ 0.38
PRPF40B-201ENST00000261897 ADAMTS3O15072 1205 aa17.44■□□□□ 0.38
PRPF40B-201ENST00000261897 TRIM37O94972 964 aa17.44■□□□□ 0.38
PRPF40B-201ENST00000261897 PCCAP05165 728 aaPredicted RBP17.44■□□□□ 0.38
PRPF40B-201ENST00000261897 MMP14P50281 582 aa17.44■□□□□ 0.38
PRPF40B-201ENST00000261897 MXRA7P84157 204 aa17.44■□□□□ 0.38
PRPF40B-201ENST00000261897 ASIC2Q16515 512 aa17.44■□□□□ 0.38
PRPF40B-201ENST00000261897 TXNRD1Q16881 649 aa17.44■□□□□ 0.38
PRPF40B-201ENST00000261897 VWA3BQ502W6 1294 aa17.44■□□□□ 0.38
PRPF40B-201ENST00000261897 MSL3Q8N5Y2 521 aaKnown RBP17.44■□□□□ 0.38
PRPF40B-201ENST00000261897 ADAM33Q9BZ11 813 aa17.44■□□□□ 0.38
PRPF40B-201ENST00000261897 BIN2Q9UBW5 565 aaPredicted RBP17.44■□□□□ 0.38
PRPF40B-201ENST00000261897 THRAP3Q9Y2W1 955 aaKnown RBP17.44■□□□□ 0.38
PRPF40B-201ENST00000261897 XRN1Q8IZH2 1706 aaKnown RBP17.44■□□□□ 0.38
PRPF40B-201ENST00000261897 PEAK1Q9H792 1746 aa17.44■□□□□ 0.38
PRPF40B-201ENST00000261897 POLE2P56282 527 aa17.44■□□□□ 0.38
PRPF40B-201ENST00000261897 CCDC6Q16204 474 aa17.44■□□□□ 0.38
PRPF40B-201ENST00000261897 THEMIS2Q5TEJ8 643 aa17.44■□□□□ 0.38
PRPF40B-201ENST00000261897 SRBD1Q8N5C6 995 aaKnown RBP17.44■□□□□ 0.38
PRPF40B-201ENST00000261897 SPDYE1Q8NFV5 336 aaPredicted RBP17.44■□□□□ 0.38
PRPF40B-201ENST00000261897 SWAP70Q9UH65 585 aa17.44■□□□□ 0.38
PRPF40B-201ENST00000261897 PREX1Q8TCU6 1659 aa17.43■□□□□ 0.38
PRPF40B-201ENST00000261897 ARAP3Q8WWN8 1544 aa17.43■□□□□ 0.38
PRPF40B-201ENST00000261897 CHN1P15882 459 aa17.43■□□□□ 0.38
PRPF40B-201ENST00000261897 SKOR1P84550 965 aa17.43■□□□□ 0.38
PRPF40B-201ENST00000261897 EVX2Q03828 476 aa17.43■□□□□ 0.38
PRPF40B-201ENST00000261897 SNX1Q13596 522 aa17.43■□□□□ 0.38
PRPF40B-201ENST00000261897 DENND2CQ68D51 928 aa17.43■□□□□ 0.38
PRPF40B-201ENST00000261897 VSIG1Q86XK7 387 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms