RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 RGL2O15211 777 aa14.4□□□□□ -0.1
SNX1-201ENST00000261889 TAL1P17542 331 aaPredicted RBP14.4□□□□□ -0.1
SNX1-201ENST00000261889 CRKLP46109 303 aaKnown RBP14.4□□□□□ -0.1
SNX1-201ENST00000261889 DNM2P50570 870 aa14.4□□□□□ -0.1
SNX1-201ENST00000261889 IFT88Q13099 833 aa14.4□□□□□ -0.1
SNX1-201ENST00000261889 SPRED3Q2MJR0 410 aa14.4□□□□□ -0.1
SNX1-201ENST00000261889 CCDC152Q4G0S7 254 aa14.4□□□□□ -0.1
SNX1-201ENST00000261889 TGFBRAP1Q8WUH2 860 aa14.4□□□□□ -0.1
SNX1-201ENST00000261889 TRIM9Q9C026 710 aa14.4□□□□□ -0.1
SNX1-201ENST00000261889 MKRN1Q9UHC7 482 aaKnown RBP14.4□□□□□ -0.1
SNX1-201ENST00000261889 FBXO3Q9UK99 471 aa14.4□□□□□ -0.1
SNX1-201ENST00000261889 FAM184BQ9ULE4 1060 aa14.4□□□□□ -0.1
SNX1-201ENST00000261889 INPP5BP32019 993 aa14.4□□□□□ -0.1
SNX1-201ENST00000261889 VAV2P52735 878 aa14.4□□□□□ -0.1
SNX1-201ENST00000261889 HDLBPQ00341 1268 aaKnown RBP14.4□□□□□ -0.1
SNX1-201ENST00000261889 RC3H1Q5TC82 1133 aaKnown RBP14.4□□□□□ -0.1
SNX1-201ENST00000261889 IKZF4Q9H2S9 585 aa14.4□□□□□ -0.1
SNX1-201ENST00000261889 RMND1Q9NWS8 449 aa14.4□□□□□ -0.1
SNX1-201ENST00000261889 ADAMTS1Q9UHI8 967 aa14.4□□□□□ -0.1
SNX1-201ENST00000261889 TACC1O75410 805 aa14.39□□□□□ -0.11
SNX1-201ENST00000261889 PALMO75781 387 aa14.39□□□□□ -0.11
SNX1-201ENST00000261889 ACTN1P12814 892 aa14.39□□□□□ -0.11
SNX1-201ENST00000261889 AENQ8WTP8 325 aaKnown RBP14.39□□□□□ -0.11
SNX1-201ENST00000261889 PNPLA7Q6ZV29 1317 aa14.39□□□□□ -0.11
SNX1-201ENST00000261889 SHTN1A0MZ66 631 aa14.39□□□□□ -0.11
SNX1-201ENST00000261889 TMCO5BA8MYB1 307 aa14.39□□□□□ -0.11
SNX1-201ENST00000261889 TDP2O95551 362 aa14.39□□□□□ -0.11
SNX1-201ENST00000261889 HNRNPH1P31943 449 aaKnown RBP14.39□□□□□ -0.11
SNX1-201ENST00000261889 POLR2FP61218 127 aaKnown RBP14.39□□□□□ -0.11
SNX1-201ENST00000261889 RAPGEF1Q13905 1077 aa14.39□□□□□ -0.11
SNX1-201ENST00000261889 LINC00116Q8NCU8 138 aa14.39□□□□□ -0.11
SNX1-201ENST00000261889 FAM212AQ96EL1 285 aa14.39□□□□□ -0.11
SNX1-201ENST00000261889 ZBED6P86452 979 aa14.39□□□□□ -0.11
SNX1-201ENST00000261889 CKAP4Q07065 602 aaKnown RBP14.39□□□□□ -0.11
SNX1-201ENST00000261889 CEP85LQ5SZL2 805 aa14.39□□□□□ -0.11
SNX1-201ENST00000261889 SPTY2D1Q68D10 685 aaPredicted RBP14.39□□□□□ -0.11
SNX1-201ENST00000261889 TLR10Q9BXR5 811 aa14.39□□□□□ -0.11
SNX1-201ENST00000261889 TTYH3Q9C0H2 523 aa14.39□□□□□ -0.11
SNX1-201ENST00000261889 MYMKA6NI61 221 aa14.38□□□□□ -0.11
SNX1-201ENST00000261889 ZNF233A6NK53 670 aa14.38□□□□□ -0.11
SNX1-201ENST00000261889 DCDC2CA8MYV0 355 aa14.38□□□□□ -0.11
SNX1-201ENST00000261889 E7EVH7 732 aa14.38□□□□□ -0.11
SNX1-201ENST00000261889 HSF2BPO75031 334 aa14.38□□□□□ -0.11
SNX1-201ENST00000261889 ZNF34Q8IZ26 560 aa14.38□□□□□ -0.11
SNX1-201ENST00000261889 FAM133AQ8N9E0 248 aa14.38□□□□□ -0.11
SNX1-201ENST00000261889 GIMAP8Q8ND71 665 aaPredicted RBP14.38□□□□□ -0.11
SNX1-201ENST00000261889 NDST4Q9H3R1 872 aa14.38□□□□□ -0.11
SNX1-201ENST00000261889 CHORDC1Q9UHD1 332 aaPredicted RBP14.38□□□□□ -0.11
SNX1-201ENST00000261889 SEMA3EO15041 775 aa14.38□□□□□ -0.11
SNX1-201ENST00000261889 EIF3HO15372 352 aaKnown RBP eCLIP14.38□□□□□ -0.11
SNX1-201ENST00000261889 TSPY3P0CV98 308 aa14.38□□□□□ -0.11
SNX1-201ENST00000261889 TSPY8P0CW00 308 aa14.38□□□□□ -0.11
SNX1-201ENST00000261889 AARSP49588 968 aaKnown RBP eCLIP14.38□□□□□ -0.11
SNX1-201ENST00000261889 UBE2SQ16763 222 aa14.38□□□□□ -0.11
SNX1-201ENST00000261889 CAVIN4Q5BKX8 364 aa14.38□□□□□ -0.11
SNX1-201ENST00000261889 TRMT1LQ7Z2T5 733 aaKnown RBP14.38□□□□□ -0.11
SNX1-201ENST00000261889 SH3RF3Q8TEJ3 882 aaPredicted RBP14.38□□□□□ -0.11
SNX1-201ENST00000261889 TBC1D5Q92609 795 aa14.38□□□□□ -0.11
SNX1-201ENST00000261889 ZNF512BQ96KM6 892 aaPredicted RBP14.38□□□□□ -0.11
SNX1-201ENST00000261889 SH2D4AQ9H788 454 aa14.38□□□□□ -0.11
SNX1-201ENST00000261889 LRRC4BQ9NT99 713 aa14.38□□□□□ -0.11
SNX1-201ENST00000261889 STIM2Q9P246 746 aa14.38□□□□□ -0.11
SNX1-201ENST00000261889 MYO1AQ9UBC5 1043 aa14.38□□□□□ -0.11
SNX1-201ENST00000261889 PCDHA4Q9UN74 947 aa14.38□□□□□ -0.11
SNX1-201ENST00000261889 FECHP22830 423 aa14.37□□□□□ -0.11
SNX1-201ENST00000261889 KLRC1P26715 233 aa14.37□□□□□ -0.11
SNX1-201ENST00000261889 TBCKQ8TEA7 893 aa14.37□□□□□ -0.11
SNX1-201ENST00000261889 TCP11L1Q9NUJ3 509 aa14.37□□□□□ -0.11
SNX1-201ENST00000261889 GGT7Q9UJ14 662 aa14.37□□□□□ -0.11
SNX1-201ENST00000261889 FLT3P36888 993 aa14.37□□□□□ -0.11
SNX1-201ENST00000261889 TRIM14Q14142 442 aa14.37□□□□□ -0.11
SNX1-201ENST00000261889 SLC27A3Q5K4L6 730 aa14.37□□□□□ -0.11
SNX1-201ENST00000261889 CCDC70Q6NSX1 233 aa14.37□□□□□ -0.11
SNX1-201ENST00000261889 DZIP1Q86YF9 867 aaKnown RBP14.37□□□□□ -0.11
SNX1-201ENST00000261889 ELOA2Q8IYF1 753 aaPredicted RBP14.37□□□□□ -0.11
SNX1-201ENST00000261889 NSUN4Q96CB9 384 aaKnown RBP14.37□□□□□ -0.11
SNX1-201ENST00000261889 EIF4E1BA6NMX2 242 aaKnown RBP14.37□□□□□ -0.11
SNX1-201ENST00000261889 SLC37A4O43826 429 aa14.37□□□□□ -0.11
SNX1-201ENST00000261889 USO1O60763 962 aaKnown RBP14.37□□□□□ -0.11
SNX1-201ENST00000261889 CFAP58Q5T655 872 aa14.37□□□□□ -0.11
SNX1-201ENST00000261889 PIGSQ96S52 555 aa14.37□□□□□ -0.11
SNX1-201ENST00000261889 RBM28Q9NW13 759 aaKnown RBP14.37□□□□□ -0.11
SNX1-201ENST00000261889 SMCO2A6NFE2 343 aa14.36□□□□□ -0.11
SNX1-201ENST00000261889 TRAF5O00463 557 aa14.36□□□□□ -0.11
SNX1-201ENST00000261889 TNNI2P48788 182 aa14.36□□□□□ -0.11
SNX1-201ENST00000261889 LRRC47Q8N1G4 583 aaKnown RBP14.36□□□□□ -0.11
SNX1-201ENST00000261889 DPH5Q9H2P9 285 aa14.36□□□□□ -0.11
SNX1-201ENST00000261889 EFCC1Q9HA90 598 aa14.36□□□□□ -0.11
SNX1-201ENST00000261889 SRP68Q9UHB9 627 aaKnown RBP14.36□□□□□ -0.11
SNX1-201ENST00000261889 MINPP1Q9UNW1 487 aa14.36□□□□□ -0.11
SNX1-201ENST00000261889 MYH3P11055 1940 aa14.36□□□□□ -0.11
SNX1-201ENST00000261889 KLRF2D3W0D1 207 aa14.36□□□□□ -0.11
SNX1-201ENST00000261889 CCNE1P24864 410 aa14.36□□□□□ -0.11
SNX1-201ENST00000261889 EEF1GP26641 437 aaKnown RBP14.36□□□□□ -0.11
SNX1-201ENST00000261889 LONP1P36776 959 aaKnown RBP14.36□□□□□ -0.11
SNX1-201ENST00000261889 PAFAH1B1P43034 410 aa14.36□□□□□ -0.11
SNX1-201ENST00000261889 PPFIA1Q13136 1202 aa14.36□□□□□ -0.11
SNX1-201ENST00000261889 E2F5Q15329 346 aa14.36□□□□□ -0.11
SNX1-201ENST00000261889 CEP57Q86XR8 500 aa14.36□□□□□ -0.11
SNX1-201ENST00000261889 EFCAB13Q8IY85 973 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms