RNA–Protein interactions for RNA: ENST00000257552.6

MSI1-201, Transcript of musashi RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSI1, Length 2,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1-201ENST00000257552 PYM1Q9BRP8 204 aaKnown RBP16.32■□□□□ 0.2
MSI1-201ENST00000257552 VCPKMTQ9H867 229 aa16.32■□□□□ 0.2
MSI1-201ENST00000257552 PDHBP11177 359 aa16.32■□□□□ 0.2
MSI1-201ENST00000257552 FCER1AP12319 257 aa16.32■□□□□ 0.2
MSI1-201ENST00000257552 NF2P35240 595 aa16.32■□□□□ 0.2
MSI1-201ENST00000257552 GFPT1Q06210 699 aaPredicted RBP16.32■□□□□ 0.2
MSI1-201ENST00000257552 NEDD9Q14511 834 aa16.32■□□□□ 0.2
MSI1-201ENST00000257552 SPATS2Q86XZ4 545 aaKnown RBP16.32■□□□□ 0.2
MSI1-201ENST00000257552 RETREG2Q8NC44 543 aa16.32■□□□□ 0.2
MSI1-201ENST00000257552 PIK3R5Q8WYR1 880 aa16.32■□□□□ 0.2
MSI1-201ENST00000257552 SCLT1Q96NL6 688 aa16.32■□□□□ 0.2
MSI1-201ENST00000257552 HIBADHP31937 336 aaKnown RBP16.31■□□□□ 0.2
MSI1-201ENST00000257552 MECOMQ03112 1051 aa16.31■□□□□ 0.2
MSI1-201ENST00000257552 STK4Q13043 487 aa16.31■□□□□ 0.2
MSI1-201ENST00000257552 MIIPQ5JXC2 388 aa16.31■□□□□ 0.2
MSI1-201ENST00000257552 DHX37Q8IY37 1157 aaKnown RBP16.31■□□□□ 0.2
MSI1-201ENST00000257552 SEPT12Q8IYM1 358 aa16.31■□□□□ 0.2
MSI1-201ENST00000257552 OR2W6PQ8NHA6 318 aa16.31■□□□□ 0.2
MSI1-201ENST00000257552 NYXQ9GZU5 481 aa16.31■□□□□ 0.2
MSI1-201ENST00000257552 BCCIPQ9P287 314 aaKnown RBP eCLIP16.31■□□□□ 0.2
MSI1-201ENST00000257552 PACSIN2Q9UNF0 486 aaPredicted RBP16.31■□□□□ 0.2
MSI1-201ENST00000257552 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.31■□□□□ 0.2
MSI1-201ENST00000257552 ZNF804BA4D1E1 1349 aa16.31■□□□□ 0.2
MSI1-201ENST00000257552 AFF2P51816 1311 aa16.31■□□□□ 0.2
MSI1-201ENST00000257552 ITIH3Q06033 890 aa16.31■□□□□ 0.2
MSI1-201ENST00000257552 PDE4DQ08499 809 aa16.31■□□□□ 0.2
MSI1-201ENST00000257552 TROAPQ12815 778 aa16.31■□□□□ 0.2
MSI1-201ENST00000257552 SPRED3Q2MJR0 410 aa16.31■□□□□ 0.2
MSI1-201ENST00000257552 PROCA1Q8NCQ7 364 aaPredicted RBP16.31■□□□□ 0.2
MSI1-201ENST00000257552 GIMAP8Q8ND71 665 aaPredicted RBP16.31■□□□□ 0.2
MSI1-201ENST00000257552 P2RX5Q93086 422 aa16.31■□□□□ 0.2
MSI1-201ENST00000257552 ODF2LQ9ULJ1 636 aa16.31■□□□□ 0.2
MSI1-201ENST00000257552 LRP5O75197 1615 aa16.31■□□□□ 0.2
MSI1-201ENST00000257552 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.3■□□□□ 0.2
MSI1-201ENST00000257552 FRMD3A2A2Y4 597 aa16.3■□□□□ 0.2
MSI1-201ENST00000257552 USP17L12C9JPN9 530 aa16.3■□□□□ 0.2
MSI1-201ENST00000257552 USP17L21D6R901 530 aa16.3■□□□□ 0.2
MSI1-201ENST00000257552 FTCDO95954 541 aa16.3■□□□□ 0.2
MSI1-201ENST00000257552 ELF1P32519 619 aa16.3■□□□□ 0.2
MSI1-201ENST00000257552 HSPA1LP34931 641 aa16.3■□□□□ 0.2
MSI1-201ENST00000257552 LONP1P36776 959 aaKnown RBP16.3■□□□□ 0.2
MSI1-201ENST00000257552 SMTNP53814 917 aa16.3■□□□□ 0.2
MSI1-201ENST00000257552 SF3A3Q12874 501 aaKnown RBP eCLIP16.3■□□□□ 0.2
MSI1-201ENST00000257552 PAK2Q13177 524 aa16.3■□□□□ 0.2
MSI1-201ENST00000257552 E2F5Q15329 346 aa16.3■□□□□ 0.2
MSI1-201ENST00000257552 CFAP221Q4G0U5 840 aa16.3■□□□□ 0.2
MSI1-201ENST00000257552 CCDC121Q6ZUS5 278 aa16.3■□□□□ 0.2
MSI1-201ENST00000257552 TMTC3Q6ZXV5 915 aa16.3■□□□□ 0.2
MSI1-201ENST00000257552 GPKOWQ92917 476 aaPredicted RBP eCLIP16.3■□□□□ 0.2
MSI1-201ENST00000257552 ATP6V1G3Q96LB4 118 aa16.3■□□□□ 0.2
MSI1-201ENST00000257552 RIOK1Q9BRS2 568 aaKnown RBP16.3■□□□□ 0.2
MSI1-201ENST00000257552 GOLGA6L7A0A1B0GV03 622 aa16.3■□□□□ 0.2
MSI1-201ENST00000257552 PRLRP16471 622 aa16.3■□□□□ 0.2
MSI1-201ENST00000257552 GNAT2P19087 354 aa16.3■□□□□ 0.2
MSI1-201ENST00000257552 RCAN1P53805 252 aa16.3■□□□□ 0.2
MSI1-201ENST00000257552 DTHD1Q6ZMT9 781 aa16.3■□□□□ 0.2
MSI1-201ENST00000257552 ZNF572Q7Z3I7 529 aaPredicted RBP16.3■□□□□ 0.2
MSI1-201ENST00000257552 KLHL7Q8IXQ5 586 aa16.3■□□□□ 0.2
MSI1-201ENST00000257552 LRRC15Q8TF66 581 aa16.3■□□□□ 0.2
MSI1-201ENST00000257552 CASKIN2Q8WXE0 1202 aa16.3■□□□□ 0.2
MSI1-201ENST00000257552 TMEM60Q9H2L4 133 aa16.3■□□□□ 0.2
MSI1-201ENST00000257552 PLAGL2Q9UPG8 496 aa16.3■□□□□ 0.2
MSI1-201ENST00000257552 PLAAQ9Y263 795 aa16.3■□□□□ 0.2
MSI1-201ENST00000257552 LRRC53A6NM62 1247 aa16.29■□□□□ 0.2
MSI1-201ENST00000257552 CYP2D6P10635 497 aa16.29■□□□□ 0.2
MSI1-201ENST00000257552 SLC1A4P43007 532 aa16.29■□□□□ 0.2
MSI1-201ENST00000257552 HLTFQ14527 1009 aaKnown RBP eCLIP16.29■□□□□ 0.2
MSI1-201ENST00000257552 KLHDC7AQ5VTJ3 777 aa16.29■□□□□ 0.2
MSI1-201ENST00000257552 KIRREL3Q8IZU9 778 aa16.29■□□□□ 0.2
MSI1-201ENST00000257552 MTMR7Q9Y216 660 aa16.29■□□□□ 0.2
MSI1-201ENST00000257552 RASSF9O75901 435 aa16.29■□□□□ 0.2
MSI1-201ENST00000257552 RHOBTB3O94955 611 aa16.29■□□□□ 0.2
MSI1-201ENST00000257552 FAM107AO95990 144 aa16.29■□□□□ 0.2
MSI1-201ENST00000257552 SCG2P13521 617 aa16.29■□□□□ 0.2
MSI1-201ENST00000257552 TMOD1P28289 359 aa16.29■□□□□ 0.2
MSI1-201ENST00000257552 ASIC1P78348 528 aa16.29■□□□□ 0.2
MSI1-201ENST00000257552 ENOX2Q16206 610 aaKnown RBP16.29■□□□□ 0.2
MSI1-201ENST00000257552 IQCA1Q86XH1 822 aa16.29■□□□□ 0.2
MSI1-201ENST00000257552 CYFIP2Q96F07 1278 aa16.29■□□□□ 0.2
MSI1-201ENST00000257552 A1CFQ9NQ94 594 aaKnown RBP16.29■□□□□ 0.2
MSI1-201ENST00000257552 MCM8Q9UJA3 840 aa16.29■□□□□ 0.2
MSI1-201ENST00000257552 PNPLA7Q6ZV29 1317 aa16.29■□□□□ 0.2
MSI1-201ENST00000257552 CCNE1P24864 410 aa16.29■□□□□ 0.2
MSI1-201ENST00000257552 PPP2R5BQ15173 497 aa16.29■□□□□ 0.2
MSI1-201ENST00000257552 TDRD12Q587J7 1177 aaKnown RBP16.29■□□□□ 0.2
MSI1-201ENST00000257552 FAM47AQ5JRC9 791 aa16.29■□□□□ 0.2
MSI1-201ENST00000257552 C4orf32Q8N8J7 132 aa16.29■□□□□ 0.2
MSI1-201ENST00000257552 GDF3Q9NR23 364 aa16.29■□□□□ 0.2
MSI1-201ENST00000257552 HAUS2Q9NVX0 235 aa16.29■□□□□ 0.2
MSI1-201ENST00000257552 FAM205AQ6ZU69 1335 aa16.29■□□□□ 0.2
MSI1-201ENST00000257552 ATXN2Q99700 1313 aaKnown RBP16.29■□□□□ 0.2
MSI1-201ENST00000257552 TM4SF1P30408 202 aa16.28■□□□□ 0.2
MSI1-201ENST00000257552 KCNB1Q14721 858 aa16.28■□□□□ 0.2
MSI1-201ENST00000257552 PTPROQ16827 1216 aa16.28■□□□□ 0.2
MSI1-201ENST00000257552 PREPLQ4J6C6 727 aaPredicted RBP16.28■□□□□ 0.2
MSI1-201ENST00000257552 SLC10A5Q5PT55 438 aa16.28■□□□□ 0.2
MSI1-201ENST00000257552 YTHDF3Q7Z739 585 aaKnown RBP16.28■□□□□ 0.2
MSI1-201ENST00000257552 CNBD1Q8NA66 436 aa16.28■□□□□ 0.2
MSI1-201ENST00000257552 NSUN4Q96CB9 384 aaKnown RBP16.28■□□□□ 0.2
MSI1-201ENST00000257552 DHTKD1Q96HY7 919 aaPredicted RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms